RNA–Protein interactions for RNA: ENST00000397644.2

LINC00887-201, long intergenic non-protein coding RNA 887, humanhuman

TSL 5

Gene LINC00887, Length 416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-201ENST00000397644 KRTAP10-5P60370 271 aa3.22□□□□□ -1.89
LINC00887-201ENST00000397644 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
LINC00887-201ENST00000397644 BRK1Q8WUW1 75 aa3.19□□□□□ -1.9
LINC00887-201ENST00000397644 PRO2289Q9P1D8 64 aa3.19□□□□□ -1.9
LINC00887-201ENST00000397644 MT1XP80297 61 aa3.15□□□□□ -1.91
LINC00887-201ENST00000397644 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
LINC00887-201ENST00000397644 PRO0628Q9UI54 55 aa3.13□□□□□ -1.91
LINC00887-201ENST00000397644 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
LINC00887-201ENST00000397644 KRTAP10-12P60413 245 aa3.11□□□□□ -1.91
LINC00887-201ENST00000397644 KRTAP9-6A8MVA2 160 aa3.09□□□□□ -1.91
LINC00887-201ENST00000397644 C10orf95Q9H7T3 257 aa3.09□□□□□ -1.91
LINC00887-201ENST00000397644 NEBP20929 6669 aa3.09□□□□□ -1.91
LINC00887-201ENST00000397644 MUC12Q9UKN1 5478 aa3.05□□□□□ -1.92
LINC00887-201ENST00000397644 TNP1P09430 55 aa3.05□□□□□ -1.92
LINC00887-201ENST00000397644 ROMO1P60602 79 aa3.05□□□□□ -1.92
LINC00887-201ENST00000397644 PMAIP1Q13794 54 aa3.05□□□□□ -1.92
LINC00887-201ENST00000397644 KRTAP25-1Q3LHN0 102 aa3□□□□□ -1.93
LINC00887-201ENST00000397644 KRTAP5-4Q6L8H1 288 aa2.98□□□□□ -1.93
LINC00887-201ENST00000397644 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
LINC00887-201ENST00000397644 KRTAP5-9P26371 169 aa2.97□□□□□ -1.93
LINC00887-201ENST00000397644 KRTAP20-1Q3LI63 56 aa2.97□□□□□ -1.93
LINC00887-201ENST00000397644 LCE3CQ5T5A8 94 aa2.97□□□□□ -1.93
LINC00887-201ENST00000397644 KMT2DO14686 5537 aa2.97□□□□□ -1.93
LINC00887-201ENST00000397644 LUZP6Q538Z0 58 aa2.96□□□□□ -1.94
LINC00887-201ENST00000397644 SPRR2FQ96RM1 72 aa2.94□□□□□ -1.94
LINC00887-201ENST00000397644 KRTAP8-1Q8IUC2 63 aa2.93□□□□□ -1.94
LINC00887-201ENST00000397644 MDN1Q9NU22 5596 aa2.93□□□□□ -1.94
LINC00887-201ENST00000397644 SPRR2EP22531 72 aa2.91□□□□□ -1.94
LINC00887-201ENST00000397644 SPRR2BP35325 72 aa2.91□□□□□ -1.94
LINC00887-201ENST00000397644 SPRR2AP35326 72 aa2.91□□□□□ -1.94
LINC00887-201ENST00000397644 LCE3AQ5TA76 89 aa2.91□□□□□ -1.94
LINC00887-201ENST00000397644 PP632Q6XCG6 107 aa2.88□□□□□ -1.95
LINC00887-201ENST00000397644 KRTAP19-5Q3LI72 72 aa2.84□□□□□ -1.95
LINC00887-201ENST00000397644 KRTAP2-3P0C7H8 128 aa2.82□□□□□ -1.96
LINC00887-201ENST00000397644 KTN1-AS1Q86SY8 53 aa2.82□□□□□ -1.96
LINC00887-201ENST00000397644 KRTAP2-4Q9BYR9 128 aa2.82□□□□□ -1.96
LINC00887-201ENST00000397644 SPRR2DP22532 72 aa2.81□□□□□ -1.96
LINC00887-201ENST00000397644 KRTAP12-3P60328 96 aa2.81□□□□□ -1.96
LINC00887-201ENST00000397644 KRTAP19-7Q3SYF9 63 aa2.8□□□□□ -1.96
LINC00887-201ENST00000397644 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
LINC00887-201ENST00000397644 MT1EP04732 61 aa2.77□□□□□ -1.97
LINC00887-201ENST00000397644 KRTAP2-1Q9BYU5 128 aa2.73□□□□□ -1.97
LINC00887-201ENST00000397644 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
LINC00887-201ENST00000397644 MT1GP13640 62 aa2.7□□□□□ -1.98
LINC00887-201ENST00000397644 KRTAP19-3Q7Z4W3 81 aa2.7□□□□□ -1.98
LINC00887-201ENST00000397644 MT1LQ93083 61 aa2.7□□□□□ -1.98
LINC00887-201ENST00000397644 KRTAP4-3Q9BYR4 195 aa2.65□□□□□ -1.99
LINC00887-201ENST00000397644 MT1MQ8N339 61 aa2.62□□□□□ -1.99
LINC00887-201ENST00000397644 DSTQ03001 7570 aaKnown RBP2.55□□□□□ -2
LINC00887-201ENST00000397644 SPRR5A0A1B0GTR4 108 aa2.53□□□□□ -2
LINC00887-201ENST00000397644 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
LINC00887-201ENST00000397644 MT4P47944 62 aa2.47□□□□□ -2.01
LINC00887-201ENST00000397644 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
LINC00887-201ENST00000397644 HMCN1Q96RW7 5635 aa2.43□□□□□ -2.02
LINC00887-201ENST00000397644 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
LINC00887-201ENST00000397644 KRTAP5-5Q701N2 237 aaPredicted RBP2.41□□□□□ -2.02
LINC00887-201ENST00000397644 LCE3DQ9BYE3 92 aa2.36□□□□□ -2.03
LINC00887-201ENST00000397644 MT1AP04731 61 aa2.3□□□□□ -2.04
LINC00887-201ENST00000397644 KRTAP12-4P60329 112 aa2.29□□□□□ -2.04
LINC00887-201ENST00000397644 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
LINC00887-201ENST00000397644 KRTAP6-1Q3LI64 71 aa2.28□□□□□ -2.04
LINC00887-201ENST00000397644 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
LINC00887-201ENST00000397644 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
LINC00887-201ENST00000397644 KRTAP20-2Q3LI61 65 aa2.27□□□□□ -2.05
LINC00887-201ENST00000397644 SYNE1Q8NF91 8797 aaKnown RBP2.24□□□□□ -2.05
LINC00887-201ENST00000397644 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
LINC00887-201ENST00000397644 KRTAP6-2Q3LI66 62 aa2.14□□□□□ -2.07
LINC00887-201ENST00000397644 INE1O15225 51 aa2.07□□□□□ -2.08
LINC00887-201ENST00000397644 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
LINC00887-201ENST00000397644 AHNAKQ09666 5890 aaKnown RBP1.96□□□□□ -2.1
LINC00887-201ENST00000397644 MUC5ACP98088 5654 aa1.95□□□□□ -2.1
LINC00887-201ENST00000397644 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
LINC00887-201ENST00000397644 MUC5BQ9HC84 5762 aaPredicted RBP1.93□□□□□ -2.1
LINC00887-201ENST00000397644 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
LINC00887-201ENST00000397644 PRM1P04553 51 aa1.58□□□□□ -2.16
LINC00887-201ENST00000397644 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
LINC00887-201ENST00000397644 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
LINC00887-201ENST00000397644 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 69.2 ms