RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 MT2AP02795 61 aa2.06□□□□□ -2.08
SSR1-202ENST00000397511 SPRR2GQ9BYE4 73 aa2.06□□□□□ -2.08
SSR1-202ENST00000397511 LCE3AQ5TA76 89 aa2.05□□□□□ -2.08
SSR1-202ENST00000397511 KRTAP5-9P26371 169 aa2.03□□□□□ -2.08
SSR1-202ENST00000397511 MT1BP07438 61 aa1.98□□□□□ -2.09
SSR1-202ENST00000397511 KRTAP10-5P60370 271 aa1.98□□□□□ -2.09
SSR1-202ENST00000397511 MT1XP80297 61 aa1.97□□□□□ -2.09
SSR1-202ENST00000397511 KRTAP2-2Q9BYT5 123 aa1.97□□□□□ -2.09
SSR1-202ENST00000397511 KRTAP10-7P60409 375 aaPredicted RBP1.97□□□□□ -2.09
SSR1-202ENST00000397511 KRTAP8-1Q8IUC2 63 aa1.96□□□□□ -2.1
SSR1-202ENST00000397511 KRTAP10-12P60413 245 aa1.95□□□□□ -2.1
SSR1-202ENST00000397511 KRTAP19-8Q3LI54 63 aa1.94□□□□□ -2.1
SSR1-202ENST00000397511 KRTAP12-3P60328 96 aa1.93□□□□□ -2.1
SSR1-202ENST00000397511 CRCT1Q9UGL9 99 aa1.93□□□□□ -2.1
SSR1-202ENST00000397511 OBSCNQ5VST9 7968 aa1.92□□□□□ -2.1
SSR1-202ENST00000397511 KRTAP5-4Q6L8H1 288 aa1.87□□□□□ -2.11
SSR1-202ENST00000397511 DSTQ03001 7570 aaKnown RBP1.87□□□□□ -2.11
SSR1-202ENST00000397511 KRTAP19-5Q3LI72 72 aa1.87□□□□□ -2.11
SSR1-202ENST00000397511 KRTAP5-11Q6L8G4 156 aa1.87□□□□□ -2.11
SSR1-202ENST00000397511 SSPOA2VEC9 5147 aa1.85□□□□□ -2.11
SSR1-202ENST00000397511 MUC12Q9UKN1 5478 aa1.83□□□□□ -2.12
SSR1-202ENST00000397511 FCGBPQ9Y6R7 5405 aaPredicted RBP1.81□□□□□ -2.12
SSR1-202ENST00000397511 LCE3CQ5T5A8 94 aa1.81□□□□□ -2.12
SSR1-202ENST00000397511 KRTAP2-3P0C7H8 128 aa1.78□□□□□ -2.12
SSR1-202ENST00000397511 KRTAP2-4Q9BYR9 128 aa1.78□□□□□ -2.12
SSR1-202ENST00000397511 KRTAP2-1Q9BYU5 128 aa1.78□□□□□ -2.12
SSR1-202ENST00000397511 KRTAP9-6A8MVA2 160 aa1.78□□□□□ -2.12
SSR1-202ENST00000397511 KRTAP19-7Q3SYF9 63 aa1.76□□□□□ -2.13
SSR1-202ENST00000397511 LCE1FQ5T754 118 aa1.76□□□□□ -2.13
SSR1-202ENST00000397511 KRTAP5-1Q6L8H4 278 aa1.76□□□□□ -2.13
SSR1-202ENST00000397511 KRTAP4-4Q9BYR3 166 aa1.76□□□□□ -2.13
SSR1-202ENST00000397511 KRTAP20-1Q3LI63 56 aa1.75□□□□□ -2.13
SSR1-202ENST00000397511 SYNE2Q8WXH0 6885 aaKnown RBP1.75□□□□□ -2.13
SSR1-202ENST00000397511 SYNE1Q8NF91 8797 aaKnown RBP1.75□□□□□ -2.13
SSR1-202ENST00000397511 MACF1Q9UPN3 7388 aaKnown RBP1.73□□□□□ -2.13
SSR1-202ENST00000397511 KRTAP19-6Q3LI70 58 aa1.72□□□□□ -2.13
SSR1-202ENST00000397511 KRTAP4-3Q9BYR4 195 aa1.72□□□□□ -2.13
SSR1-202ENST00000397511 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
SSR1-202ENST00000397511 MT1LQ93083 61 aa1.7□□□□□ -2.14
SSR1-202ENST00000397511 MT1EP04732 61 aa1.69□□□□□ -2.14
SSR1-202ENST00000397511 LCE1AQ5T7P2 110 aa1.69□□□□□ -2.14
SSR1-202ENST00000397511 MDN1Q9NU22 5596 aa1.67□□□□□ -2.14
SSR1-202ENST00000397511 MT1GP13640 62 aa1.67□□□□□ -2.14
SSR1-202ENST00000397511 KRTAP6-3Q3LI67 103 aa1.66□□□□□ -2.14
SSR1-202ENST00000397511 KRTAP5-2Q701N4 177 aa1.66□□□□□ -2.14
SSR1-202ENST00000397511 KRTAP12-4P60329 112 aa1.64□□□□□ -2.15
SSR1-202ENST00000397511 MT3P25713 68 aa1.63□□□□□ -2.15
SSR1-202ENST00000397511 LCE1EQ5T753 118 aa1.62□□□□□ -2.15
SSR1-202ENST00000397511 SPRR2FQ96RM1 72 aa1.61□□□□□ -2.15
SSR1-202ENST00000397511 MT1MQ8N339 61 aa1.59□□□□□ -2.16
SSR1-202ENST00000397511 KRTAP19-3Q7Z4W3 81 aa1.59□□□□□ -2.16
SSR1-202ENST00000397511 NEBP20929 6669 aa1.58□□□□□ -2.16
SSR1-202ENST00000397511 KRTAP5-8O75690 187 aa1.57□□□□□ -2.16
SSR1-202ENST00000397511 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
SSR1-202ENST00000397511 PRM1P04553 51 aa1.49□□□□□ -2.17
SSR1-202ENST00000397511 KRTAP6-1Q3LI64 71 aa1.47□□□□□ -2.17
SSR1-202ENST00000397511 MT1AP04731 61 aa1.45□□□□□ -2.18
SSR1-202ENST00000397511 LCE3EQ5T5B0 92 aa1.45□□□□□ -2.18
SSR1-202ENST00000397511 LCE3DQ9BYE3 92 aa1.44□□□□□ -2.18
SSR1-202ENST00000397511 SPRR2EP22531 72 aa1.44□□□□□ -2.18
SSR1-202ENST00000397511 SPRR2BP35325 72 aa1.44□□□□□ -2.18
SSR1-202ENST00000397511 SPRR2AP35326 72 aa1.44□□□□□ -2.18
SSR1-202ENST00000397511 KRTAP5-5Q701N2 237 aaPredicted RBP1.43□□□□□ -2.18
SSR1-202ENST00000397511 KRTAP5-10Q6L8G5 202 aa1.41□□□□□ -2.18
SSR1-202ENST00000397511 AHNAK2Q8IVF2 5795 aa1.38□□□□□ -2.19
SSR1-202ENST00000397511 SPRR2DP22532 72 aa1.36□□□□□ -2.19
SSR1-202ENST00000397511 KRTAP6-2Q3LI66 62 aa1.36□□□□□ -2.19
SSR1-202ENST00000397511 MT4P47944 62 aa1.28□□□□□ -2.21
SSR1-202ENST00000397511 MUC19Q7Z5P9 8384 aa1.27□□□□□ -2.21
SSR1-202ENST00000397511 MUC5ACP98088 5654 aa1.21□□□□□ -2.22
SSR1-202ENST00000397511 KRTAP20-2Q3LI61 65 aa1.16□□□□□ -2.22
SSR1-202ENST00000397511 LCE1BQ5T7P3 118 aa1.13□□□□□ -2.23
SSR1-202ENST00000397511 LCE1CQ5T751 118 aa1.06□□□□□ -2.24
SSR1-202ENST00000397511 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
SSR1-202ENST00000397511 KRTAP21-2Q3LI59 83 aa0.92□□□□□ -2.26
SSR1-202ENST00000397511 PHGR1C9JFL3 82 aa0.79□□□□□ -2.28
SSR1-202ENST00000397511 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 321.6 ms