RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 KTN1-AS1Q86SY8 53 aa6.42□□□□□ -1.38
TSPAN4-205ENST00000397406 PRAC1Q96KF2 57 aa6.39□□□□□ -1.39
TSPAN4-205ENST00000397406 PP632Q6XCG6 107 aa6.38□□□□□ -1.39
TSPAN4-205ENST00000397406 KRTAP19-5Q3LI72 72 aa6.31□□□□□ -1.4
TSPAN4-205ENST00000397406 KRTAP19-7Q3SYF9 63 aa6.31□□□□□ -1.4
TSPAN4-205ENST00000397406 SPRR2DP22532 72 aa6.28□□□□□ -1.4
TSPAN4-205ENST00000397406 KRTAP2-2Q9BYT5 123 aa6.28□□□□□ -1.4
TSPAN4-205ENST00000397406 KRTAP2-1Q9BYU5 128 aa6.28□□□□□ -1.4
TSPAN4-205ENST00000397406 KRTAP12-3P60328 96 aa6.25□□□□□ -1.41
TSPAN4-205ENST00000397406 MT1EP04732 61 aa6.21□□□□□ -1.42
TSPAN4-205ENST00000397406 LCE3BQ5TA77 95 aa6.14□□□□□ -1.43
TSPAN4-205ENST00000397406 KRTAP15-1Q3LI76 137 aa6.06□□□□□ -1.44
TSPAN4-205ENST00000397406 MT1LQ93083 61 aa6.05□□□□□ -1.44
TSPAN4-205ENST00000397406 KRTAP19-3Q7Z4W3 81 aa6□□□□□ -1.45
TSPAN4-205ENST00000397406 LCE5AQ5TCM9 118 aa5.99□□□□□ -1.45
TSPAN4-205ENST00000397406 MT1GP13640 62 aa5.92□□□□□ -1.46
TSPAN4-205ENST00000397406 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
TSPAN4-205ENST00000397406 MT1MQ8N339 61 aa5.86□□□□□ -1.47
TSPAN4-205ENST00000397406 DSTQ03001 7570 aaKnown RBP5.86□□□□□ -1.47
TSPAN4-205ENST00000397406 LCE3CQ5T5A8 94 aa5.82□□□□□ -1.48
TSPAN4-205ENST00000397406 KRTAP4-7Q9BYR0 210 aa5.81□□□□□ -1.48
TSPAN4-205ENST00000397406 KRTAP4-9Q9BYQ8 210 aa5.8□□□□□ -1.48
TSPAN4-205ENST00000397406 KRTAP4-3Q9BYR4 195 aa5.73□□□□□ -1.49
TSPAN4-205ENST00000397406 LCE1DQ5T752 114 aa5.64□□□□□ -1.51
TSPAN4-205ENST00000397406 GPR98Q8WXG9 6306 aa5.61□□□□□ -1.51
TSPAN4-205ENST00000397406 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
TSPAN4-205ENST00000397406 LCE4AQ5TA78 99 aa5.54□□□□□ -1.52
TSPAN4-205ENST00000397406 MT4P47944 62 aa5.53□□□□□ -1.52
TSPAN4-205ENST00000397406 HMCN1Q96RW7 5635 aa5.53□□□□□ -1.52
TSPAN4-205ENST00000397406 KRTAP9-6A8MVA2 160 aa5.52□□□□□ -1.53
TSPAN4-205ENST00000397406 KRTAP5-4Q6L8H1 288 aa5.51□□□□□ -1.53
TSPAN4-205ENST00000397406 LOC100996750A0A140TA64 210 aa5.47□□□□□ -1.53
TSPAN4-205ENST00000397406 KRTAP4-6Q9BYQ5 205 aa5.44□□□□□ -1.54
TSPAN4-205ENST00000397406 AHNAK2Q8IVF2 5795 aa5.35□□□□□ -1.55
TSPAN4-205ENST00000397406 KRTAP5-5Q701N2 237 aaPredicted RBP5.32□□□□□ -1.56
TSPAN4-205ENST00000397406 KRTAP5-10Q6L8G5 202 aa5.31□□□□□ -1.56
TSPAN4-205ENST00000397406 LUZP6Q538Z0 58 aa5.21□□□□□ -1.58
TSPAN4-205ENST00000397406 KRTAP20-2Q3LI61 65 aa5.19□□□□□ -1.58
TSPAN4-205ENST00000397406 MT1AP04731 61 aa5.14□□□□□ -1.59
TSPAN4-205ENST00000397406 KRTAP5-3Q6L8H2 238 aa5.14□□□□□ -1.59
TSPAN4-205ENST00000397406 H3BS24 57 aa5.12□□□□□ -1.59
TSPAN4-205ENST00000397406 KRTAP6-1Q3LI64 71 aa5.09□□□□□ -1.59
TSPAN4-205ENST00000397406 KRTAP5-7Q6L8G8 165 aa5.08□□□□□ -1.6
TSPAN4-205ENST00000397406 SYNE1Q8NF91 8797 aaKnown RBP5.06□□□□□ -1.6
TSPAN4-205ENST00000397406 KRTAP12-4P60329 112 aa5.02□□□□□ -1.61
TSPAN4-205ENST00000397406 NDUFAF8A1L188 74 aa4.92□□□□□ -1.62
TSPAN4-205ENST00000397406 KRTAP9-4Q9BYQ2 154 aa4.9□□□□□ -1.62
TSPAN4-205ENST00000397406 KRTAP5-2Q701N4 177 aa4.82□□□□□ -1.64
TSPAN4-205ENST00000397406 KRTAP4-11Q9BYQ6 195 aa4.74□□□□□ -1.65
TSPAN4-205ENST00000397406 KRTAP6-2Q3LI66 62 aa4.72□□□□□ -1.65
TSPAN4-205ENST00000397406 MT3P25713 68 aa4.65□□□□□ -1.66
TSPAN4-205ENST00000397406 KRTAP5-8O75690 187 aa4.63□□□□□ -1.67
TSPAN4-205ENST00000397406 OBSCNQ5VST9 7968 aa4.46□□□□□ -1.7
TSPAN4-205ENST00000397406 MUC5BQ9HC84 5762 aaPredicted RBP4.41□□□□□ -1.7
TSPAN4-205ENST00000397406 MUC5ACP98088 5654 aa4.4□□□□□ -1.71
TSPAN4-205ENST00000397406 AHNAKQ09666 5890 aaKnown RBP4.37□□□□□ -1.71
TSPAN4-205ENST00000397406 KRTAP5-1Q6L8H4 278 aa4.36□□□□□ -1.71
TSPAN4-205ENST00000397406 A0A0A0MQY5 61 aa4.34□□□□□ -1.71
TSPAN4-205ENST00000397406 LCE3DQ9BYE3 92 aa4.32□□□□□ -1.72
TSPAN4-205ENST00000397406 KRTAP9-9Q9BYP9 154 aa4.29□□□□□ -1.72
TSPAN4-205ENST00000397406 LCE3EQ5T5B0 92 aa4.18□□□□□ -1.74
TSPAN4-205ENST00000397406 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
TSPAN4-205ENST00000397406 INE1O15225 51 aa4.06□□□□□ -1.76
TSPAN4-205ENST00000397406 KRTAP4-2Q9BYR5 136 aa3.93□□□□□ -1.78
TSPAN4-205ENST00000397406 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
TSPAN4-205ENST00000397406 LCE1BQ5T7P3 118 aa3.83□□□□□ -1.8
TSPAN4-205ENST00000397406 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
TSPAN4-205ENST00000397406 KRTAP4-12Q9BQ66 201 aa3.58□□□□□ -1.84
TSPAN4-205ENST00000397406 PRM1P04553 51 aa3.53□□□□□ -1.84
TSPAN4-205ENST00000397406 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
TSPAN4-205ENST00000397406 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
TSPAN4-205ENST00000397406 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
TSPAN4-205ENST00000397406 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
TSPAN4-205ENST00000397406 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
TSPAN4-205ENST00000397406 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
TSPAN4-205ENST00000397406 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
TSPAN4-205ENST00000397406 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 120.5 ms