RNA–Protein interactions for RNA: ENST00000397370.3

RBM39-205, Transcript of RNA binding motif protein 39, humanhuman

TSL 2 BASIC

Gene RBM39, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-205ENST00000397370 SPRR2AP35326 72 aa6.13□□□□□ -1.43
RBM39-205ENST00000397370 TNP1P09430 55 aa6.12□□□□□ -1.43
RBM39-205ENST00000397370 LCE1AQ5T7P2 110 aa6.1□□□□□ -1.43
RBM39-205ENST00000397370 MDN1Q9NU22 5596 aa6.1□□□□□ -1.43
RBM39-205ENST00000397370 KRTAP19-7Q3SYF9 63 aa6.05□□□□□ -1.44
RBM39-205ENST00000397370 KRTAP23-1A1A580 65 aa5.99□□□□□ -1.45
RBM39-205ENST00000397370 LCE3AQ5TA76 89 aa5.99□□□□□ -1.45
RBM39-205ENST00000397370 MT1EP04732 61 aa5.98□□□□□ -1.45
RBM39-205ENST00000397370 KRTAP19-5Q3LI72 72 aa5.97□□□□□ -1.45
RBM39-205ENST00000397370 KRTAP20-1Q3LI63 56 aa5.95□□□□□ -1.46
RBM39-205ENST00000397370 CDC42SE1Q9NRR8 79 aa5.95□□□□□ -1.46
RBM39-205ENST00000397370 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
RBM39-205ENST00000397370 SPRR2DP22532 72 aa5.92□□□□□ -1.46
RBM39-205ENST00000397370 KRTAP2-3P0C7H8 128 aa5.89□□□□□ -1.47
RBM39-205ENST00000397370 KRTAP2-4Q9BYR9 128 aa5.89□□□□□ -1.47
RBM39-205ENST00000397370 KRTAP19-3Q7Z4W3 81 aa5.86□□□□□ -1.47
RBM39-205ENST00000397370 ROMO1P60602 79 aa5.78□□□□□ -1.48
RBM39-205ENST00000397370 MT1GP13640 62 aa5.76□□□□□ -1.49
RBM39-205ENST00000397370 KRTAP12-3P60328 96 aa5.76□□□□□ -1.49
RBM39-205ENST00000397370 KRTAP5-3Q6L8H2 238 aa5.76□□□□□ -1.49
RBM39-205ENST00000397370 MT1LQ93083 61 aa5.76□□□□□ -1.49
RBM39-205ENST00000397370 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
RBM39-205ENST00000397370 KRTAP2-2Q9BYT5 123 aa5.72□□□□□ -1.49
RBM39-205ENST00000397370 KRTAP2-1Q9BYU5 128 aa5.72□□□□□ -1.49
RBM39-205ENST00000397370 PP632Q6XCG6 107 aa5.7□□□□□ -1.5
RBM39-205ENST00000397370 MT1MQ8N339 61 aa5.67□□□□□ -1.5
RBM39-205ENST00000397370 BRK1Q8WUW1 75 aa5.63□□□□□ -1.51
RBM39-205ENST00000397370 A0A0A0MQY5 61 aa5.61□□□□□ -1.51
RBM39-205ENST00000397370 DSTQ03001 7570 aaKnown RBP5.6□□□□□ -1.51
RBM39-205ENST00000397370 KRTAP4-3Q9BYR4 195 aa5.53□□□□□ -1.52
RBM39-205ENST00000397370 GPR98Q8WXG9 6306 aa5.4□□□□□ -1.54
RBM39-205ENST00000397370 LCE3CQ5T5A8 94 aa5.34□□□□□ -1.55
RBM39-205ENST00000397370 PMAIP1Q13794 54 aa5.31□□□□□ -1.56
RBM39-205ENST00000397370 KRTAP5-4Q6L8H1 288 aa5.22□□□□□ -1.57
RBM39-205ENST00000397370 KRTAP5-5Q701N2 237 aaPredicted RBP5.17□□□□□ -1.58
RBM39-205ENST00000397370 PRO0628Q9UI54 55 aa5.17□□□□□ -1.58
RBM39-205ENST00000397370 MT4P47944 62 aa5.16□□□□□ -1.58
RBM39-205ENST00000397370 PRAC1Q96KF2 57 aa5.05□□□□□ -1.6
RBM39-205ENST00000397370 KRTAP9-6A8MVA2 160 aa5.03□□□□□ -1.6
RBM39-205ENST00000397370 HMCN1Q96RW7 5635 aa4.98□□□□□ -1.61
RBM39-205ENST00000397370 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
RBM39-205ENST00000397370 SYNE1Q8NF91 8797 aaKnown RBP4.92□□□□□ -1.62
RBM39-205ENST00000397370 SPRR5A0A1B0GTR4 108 aa4.91□□□□□ -1.62
RBM39-205ENST00000397370 MT1AP04731 61 aa4.91□□□□□ -1.62
RBM39-205ENST00000397370 KRTAP20-2Q3LI61 65 aa4.91□□□□□ -1.62
RBM39-205ENST00000397370 KTN1-AS1Q86SY8 53 aa4.88□□□□□ -1.63
RBM39-205ENST00000397370 KRTAP6-1Q3LI64 71 aa4.86□□□□□ -1.63
RBM39-205ENST00000397370 AHNAK2Q8IVF2 5795 aa4.72□□□□□ -1.65
RBM39-205ENST00000397370 MT3P25713 68 aa4.68□□□□□ -1.66
RBM39-205ENST00000397370 KRTAP5-10Q6L8G5 202 aa4.68□□□□□ -1.66
RBM39-205ENST00000397370 KRTAP5-2Q701N4 177 aa4.63□□□□□ -1.67
RBM39-205ENST00000397370 KRTAP5-7Q6L8G8 165 aa4.61□□□□□ -1.67
RBM39-205ENST00000397370 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
RBM39-205ENST00000397370 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
RBM39-205ENST00000397370 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.38□□□□□ -1.71
RBM39-205ENST00000397370 KRTAP5-11Q6L8G4 156 aa4.36□□□□□ -1.71
RBM39-205ENST00000397370 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
RBM39-205ENST00000397370 KRTAP5-8O75690 187 aa4.25□□□□□ -1.73
RBM39-205ENST00000397370 LUZP6Q538Z0 58 aa4.21□□□□□ -1.74
RBM39-205ENST00000397370 AHNAKQ09666 5890 aaKnown RBP4.13□□□□□ -1.75
RBM39-205ENST00000397370 KRTAP5-1Q6L8H4 278 aa4.1□□□□□ -1.75
RBM39-205ENST00000397370 MUC5ACP98088 5654 aa4.03□□□□□ -1.76
RBM39-205ENST00000397370 MUC5BQ9HC84 5762 aaPredicted RBP4□□□□□ -1.77
RBM39-205ENST00000397370 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
RBM39-205ENST00000397370 LCE3DQ9BYE3 92 aa3.91□□□□□ -1.78
RBM39-205ENST00000397370 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
RBM39-205ENST00000397370 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
RBM39-205ENST00000397370 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
RBM39-205ENST00000397370 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
RBM39-205ENST00000397370 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
RBM39-205ENST00000397370 KRTAP21-2Q3LI59 83 aa3.2□□□□□ -1.9
RBM39-205ENST00000397370 INE1O15225 51 aa2.99□□□□□ -1.93
RBM39-205ENST00000397370 PRM1P04553 51 aa2.98□□□□□ -1.93
RBM39-205ENST00000397370 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
RBM39-205ENST00000397370 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
RBM39-205ENST00000397370 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
RBM39-205ENST00000397370 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 17.2 ms