RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 PP632Q6XCG6 107 aa5.23□□□□□ -1.57
SEC13-209ENST00000397117 KRTAP10-12P60413 245 aa5.19□□□□□ -1.58
SEC13-209ENST00000397117 KRTAP4-8A0A0G2JLE6 195 aa5.17□□□□□ -1.58
SEC13-209ENST00000397117 KRTAP4-8Q9BYQ9 185 aa5.17□□□□□ -1.58
SEC13-209ENST00000397117 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
SEC13-209ENST00000397117 LCE3BQ5TA77 95 aa5.15□□□□□ -1.59
SEC13-209ENST00000397117 GPR98Q8WXG9 6306 aa5.12□□□□□ -1.59
SEC13-209ENST00000397117 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
SEC13-209ENST00000397117 LCE3AQ5TA76 89 aa5.09□□□□□ -1.59
SEC13-209ENST00000397117 DSTQ03001 7570 aaKnown RBP4.94□□□□□ -1.62
SEC13-209ENST00000397117 KRTAP19-5Q3LI72 72 aa4.93□□□□□ -1.62
SEC13-209ENST00000397117 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
SEC13-209ENST00000397117 KRTAP4-9Q9BYQ8 210 aa4.9□□□□□ -1.63
SEC13-209ENST00000397117 KRTAP19-7Q3SYF9 63 aa4.87□□□□□ -1.63
SEC13-209ENST00000397117 H3BS24 57 aa4.86□□□□□ -1.63
SEC13-209ENST00000397117 NDUFAF8A1L188 74 aa4.83□□□□□ -1.64
SEC13-209ENST00000397117 MT1EP04732 61 aa4.81□□□□□ -1.64
SEC13-209ENST00000397117 LCE5AQ5TCM9 118 aa4.8□□□□□ -1.64
SEC13-209ENST00000397117 LUZP6Q538Z0 58 aa4.76□□□□□ -1.65
SEC13-209ENST00000397117 SPRR5A0A1B0GTR4 108 aa4.74□□□□□ -1.65
SEC13-209ENST00000397117 LCE1DQ5T752 114 aa4.74□□□□□ -1.65
SEC13-209ENST00000397117 KRTAP19-3Q7Z4W3 81 aa4.72□□□□□ -1.65
SEC13-209ENST00000397117 HMCN1Q96RW7 5635 aa4.7□□□□□ -1.66
SEC13-209ENST00000397117 MT1LQ93083 61 aa4.69□□□□□ -1.66
SEC13-209ENST00000397117 AHNAK2Q8IVF2 5795 aa4.65□□□□□ -1.66
SEC13-209ENST00000397117 LCE4AQ5TA78 99 aa4.64□□□□□ -1.67
SEC13-209ENST00000397117 MT4P47944 62 aa4.62□□□□□ -1.67
SEC13-209ENST00000397117 KRTAP19-4Q3LI73 84 aa4.62□□□□□ -1.67
SEC13-209ENST00000397117 MT1GP13640 62 aa4.61□□□□□ -1.67
SEC13-209ENST00000397117 KRTAP5-10Q6L8G5 202 aa4.59□□□□□ -1.67
SEC13-209ENST00000397117 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
SEC13-209ENST00000397117 MT1MQ8N339 61 aa4.54□□□□□ -1.68
SEC13-209ENST00000397117 KRTAP5-4Q6L8H1 288 aa4.52□□□□□ -1.69
SEC13-209ENST00000397117 KRTAP4-7Q9BYR0 210 aa4.5□□□□□ -1.69
SEC13-209ENST00000397117 KRTAP4-6Q9BYQ5 205 aa4.49□□□□□ -1.69
SEC13-209ENST00000397117 KRTAP5-7Q6L8G8 165 aa4.46□□□□□ -1.69
SEC13-209ENST00000397117 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
SEC13-209ENST00000397117 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.7
SEC13-209ENST00000397117 A0A0A0MQY5 61 aa4.39□□□□□ -1.71
SEC13-209ENST00000397117 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
SEC13-209ENST00000397117 KRTAP20-2Q3LI61 65 aa4.27□□□□□ -1.73
SEC13-209ENST00000397117 LOC100996750A0A140TA64 210 aa4.24□□□□□ -1.73
SEC13-209ENST00000397117 KRTAP5-5Q701N2 237 aaPredicted RBP4.17□□□□□ -1.74
SEC13-209ENST00000397117 KRTAP12-4P60329 112 aa4.12□□□□□ -1.75
SEC13-209ENST00000397117 SYNE1Q8NF91 8797 aaKnown RBP4.07□□□□□ -1.76
SEC13-209ENST00000397117 INE1O15225 51 aa4.06□□□□□ -1.76
SEC13-209ENST00000397117 MT1AP04731 61 aa3.99□□□□□ -1.77
SEC13-209ENST00000397117 KRTAP4-11Q9BYQ6 195 aa3.99□□□□□ -1.77
SEC13-209ENST00000397117 KRTAP6-1Q3LI64 71 aa3.95□□□□□ -1.78
SEC13-209ENST00000397117 AHNAKQ09666 5890 aaKnown RBP3.93□□□□□ -1.78
SEC13-209ENST00000397117 MUC5ACP98088 5654 aa3.89□□□□□ -1.79
SEC13-209ENST00000397117 KRTAP5-2Q701N4 177 aa3.89□□□□□ -1.79
SEC13-209ENST00000397117 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
SEC13-209ENST00000397117 MUC5BQ9HC84 5762 aaPredicted RBP3.86□□□□□ -1.79
SEC13-209ENST00000397117 KRTAP9-4Q9BYQ2 154 aa3.81□□□□□ -1.8
SEC13-209ENST00000397117 KRTAP9-9Q9BYP9 154 aa3.7□□□□□ -1.82
SEC13-209ENST00000397117 OBSCNQ5VST9 7968 aa3.69□□□□□ -1.82
SEC13-209ENST00000397117 KRTAP6-2Q3LI66 62 aa3.68□□□□□ -1.82
SEC13-209ENST00000397117 MT3P25713 68 aa3.65□□□□□ -1.83
SEC13-209ENST00000397117 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
SEC13-209ENST00000397117 LCE3DQ9BYE3 92 aa3.42□□□□□ -1.86
SEC13-209ENST00000397117 LCE3EQ5T5B0 92 aa3.3□□□□□ -1.88
SEC13-209ENST00000397117 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
SEC13-209ENST00000397117 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
SEC13-209ENST00000397117 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
SEC13-209ENST00000397117 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
SEC13-209ENST00000397117 PRM1P04553 51 aa2.97□□□□□ -1.93
SEC13-209ENST00000397117 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
SEC13-209ENST00000397117 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
SEC13-209ENST00000397117 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
SEC13-209ENST00000397117 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
SEC13-209ENST00000397117 PHGR1C9JFL3 82 aa2.67□□□□□ -1.98
SEC13-209ENST00000397117 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
SEC13-209ENST00000397117 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
SEC13-209ENST00000397117 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
SEC13-209ENST00000397117 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
SEC13-209ENST00000397117 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 9.7 ms