RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 KRTAP4-8A0A0G2JLE6 195 aa6.92□□□□□ -1.3
TNFSF13-205ENST00000396545 KRTAP4-8Q9BYQ9 185 aa6.92□□□□□ -1.3
TNFSF13-205ENST00000396545 SPRR2DP22532 72 aa6.9□□□□□ -1.31
TNFSF13-205ENST00000396545 KRTAP10-7P60409 375 aaPredicted RBP6.81□□□□□ -1.32
TNFSF13-205ENST00000396545 LCE3AQ5TA76 89 aa6.79□□□□□ -1.32
TNFSF13-205ENST00000396545 KRTAP10-12P60413 245 aa6.78□□□□□ -1.32
TNFSF13-205ENST00000396545 KRTAP15-1Q3LI76 137 aa6.75□□□□□ -1.33
TNFSF13-205ENST00000396545 LCE3BQ5TA77 95 aa6.74□□□□□ -1.33
TNFSF13-205ENST00000396545 KRTAP12-3P60328 96 aa6.51□□□□□ -1.37
TNFSF13-205ENST00000396545 GPR98Q8WXG9 6306 aa6.47□□□□□ -1.37
TNFSF13-205ENST00000396545 SPRR5A0A1B0GTR4 108 aa6.43□□□□□ -1.38
TNFSF13-205ENST00000396545 DSTQ03001 7570 aaKnown RBP6.42□□□□□ -1.38
TNFSF13-205ENST00000396545 LCE5AQ5TCM9 118 aa6.41□□□□□ -1.38
TNFSF13-205ENST00000396545 KRTAP19-5Q3LI72 72 aa6.4□□□□□ -1.39
TNFSF13-205ENST00000396545 KRTAP19-7Q3SYF9 63 aa6.4□□□□□ -1.39
TNFSF13-205ENST00000396545 MT1EP04732 61 aa6.35□□□□□ -1.39
TNFSF13-205ENST00000396545 KRTAP19-3Q7Z4W3 81 aa6.35□□□□□ -1.39
TNFSF13-205ENST00000396545 KRTAP4-9Q9BYQ8 210 aa6.34□□□□□ -1.39
TNFSF13-205ENST00000396545 NDUFAF8A1L188 74 aa6.28□□□□□ -1.4
TNFSF13-205ENST00000396545 KRTAP19-4Q3LI73 84 aa6.24□□□□□ -1.41
TNFSF13-205ENST00000396545 LUZP6Q538Z0 58 aa6.23□□□□□ -1.41
TNFSF13-205ENST00000396545 LCE1DQ5T752 114 aa6.17□□□□□ -1.42
TNFSF13-205ENST00000396545 MT1GP13640 62 aa6.15□□□□□ -1.42
TNFSF13-205ENST00000396545 HMCN1Q96RW7 5635 aa6.13□□□□□ -1.43
TNFSF13-205ENST00000396545 LCE3CQ5T5A8 94 aa6.1□□□□□ -1.43
TNFSF13-205ENST00000396545 MT1LQ93083 61 aa6.1□□□□□ -1.43
TNFSF13-205ENST00000396545 LCE4AQ5TA78 99 aa6.08□□□□□ -1.44
TNFSF13-205ENST00000396545 MT1MQ8N339 61 aa6.06□□□□□ -1.44
TNFSF13-205ENST00000396545 MT4P47944 62 aa6.05□□□□□ -1.44
TNFSF13-205ENST00000396545 AHNAK2Q8IVF2 5795 aa5.96□□□□□ -1.45
TNFSF13-205ENST00000396545 KRTAP5-4Q6L8H1 288 aa5.95□□□□□ -1.46
TNFSF13-205ENST00000396545 KRTAP4-3Q9BYR4 195 aa5.93□□□□□ -1.46
TNFSF13-205ENST00000396545 H3BS24 57 aa5.91□□□□□ -1.46
TNFSF13-205ENST00000396545 KRTAP5-10Q6L8G5 202 aa5.89□□□□□ -1.47
TNFSF13-205ENST00000396545 KRTAP4-7Q9BYR0 210 aa5.89□□□□□ -1.47
TNFSF13-205ENST00000396545 KRTAP4-6Q9BYQ5 205 aa5.87□□□□□ -1.47
TNFSF13-205ENST00000396545 KRTAP9-6A8MVA2 160 aa5.81□□□□□ -1.48
TNFSF13-205ENST00000396545 KRTAP5-7Q6L8G8 165 aa5.68□□□□□ -1.5
TNFSF13-205ENST00000396545 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
TNFSF13-205ENST00000396545 KRTAP20-2Q3LI61 65 aa5.63□□□□□ -1.51
TNFSF13-205ENST00000396545 KRTAP5-5Q701N2 237 aaPredicted RBP5.61□□□□□ -1.51
TNFSF13-205ENST00000396545 A0A0A0MQY5 61 aa5.56□□□□□ -1.52
TNFSF13-205ENST00000396545 LOC100996750A0A140TA64 210 aa5.51□□□□□ -1.53
TNFSF13-205ENST00000396545 KRTAP12-4P60329 112 aa5.49□□□□□ -1.53
TNFSF13-205ENST00000396545 SYNE1Q8NF91 8797 aaKnown RBP5.39□□□□□ -1.55
TNFSF13-205ENST00000396545 MT1AP04731 61 aa5.21□□□□□ -1.57
TNFSF13-205ENST00000396545 INE1O15225 51 aa5.21□□□□□ -1.58
TNFSF13-205ENST00000396545 KRTAP4-11Q9BYQ6 195 aa5.21□□□□□ -1.58
TNFSF13-205ENST00000396545 KRTAP5-2Q701N4 177 aa5.17□□□□□ -1.58
TNFSF13-205ENST00000396545 KRTAP6-1Q3LI64 71 aa5.11□□□□□ -1.59
TNFSF13-205ENST00000396545 KRTAP5-8O75690 187 aa5.04□□□□□ -1.6
TNFSF13-205ENST00000396545 MUC5BQ9HC84 5762 aaPredicted RBP4.98□□□□□ -1.61
TNFSF13-205ENST00000396545 MUC5ACP98088 5654 aa4.97□□□□□ -1.61
TNFSF13-205ENST00000396545 AHNAKQ09666 5890 aaKnown RBP4.96□□□□□ -1.61
TNFSF13-205ENST00000396545 KRTAP9-4Q9BYQ2 154 aa4.96□□□□□ -1.62
TNFSF13-205ENST00000396545 KRTAP6-2Q3LI66 62 aa4.93□□□□□ -1.62
TNFSF13-205ENST00000396545 OBSCNQ5VST9 7968 aa4.87□□□□□ -1.63
TNFSF13-205ENST00000396545 KRTAP9-9Q9BYP9 154 aa4.8□□□□□ -1.64
TNFSF13-205ENST00000396545 MT3P25713 68 aa4.75□□□□□ -1.65
TNFSF13-205ENST00000396545 KRTAP5-1Q6L8H4 278 aa4.69□□□□□ -1.66
TNFSF13-205ENST00000396545 LCE3DQ9BYE3 92 aa4.61□□□□□ -1.67
TNFSF13-205ENST00000396545 LCE3EQ5T5B0 92 aa4.52□□□□□ -1.69
TNFSF13-205ENST00000396545 LCE1EQ5T753 118 aa4.38□□□□□ -1.71
TNFSF13-205ENST00000396545 KRTAP4-2Q9BYR5 136 aa4.17□□□□□ -1.74
TNFSF13-205ENST00000396545 LCE1BQ5T7P3 118 aa4.12□□□□□ -1.75
TNFSF13-205ENST00000396545 LCE1CQ5T751 118 aa4.06□□□□□ -1.76
TNFSF13-205ENST00000396545 PRM1P04553 51 aa4.05□□□□□ -1.76
TNFSF13-205ENST00000396545 KRTAP4-12Q9BQ66 201 aa3.85□□□□□ -1.79
TNFSF13-205ENST00000396545 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
TNFSF13-205ENST00000396545 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
TNFSF13-205ENST00000396545 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
TNFSF13-205ENST00000396545 PHGR1C9JFL3 82 aa3.42□□□□□ -1.86
TNFSF13-205ENST00000396545 KRTAP21-2Q3LI59 83 aa3.38□□□□□ -1.87
TNFSF13-205ENST00000396545 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
TNFSF13-205ENST00000396545 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
TNFSF13-205ENST00000396545 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
TNFSF13-205ENST00000396545 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 62.7 ms