RNA–Protein interactions for RNA: ENST00000395792.6

AFP-202, Transcript of alpha fetoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFP, Length 2,484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-202ENST00000395792 KRTAP10-5P60370 271 aa2.5□□□□□ -2.01
AFP-202ENST00000395792 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
AFP-202ENST00000395792 MT1XP80297 61 aa2.5□□□□□ -2.01
AFP-202ENST00000395792 LCE1AQ5T7P2 110 aa2.47□□□□□ -2.01
AFP-202ENST00000395792 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
AFP-202ENST00000395792 KRTAP10-12P60413 245 aa2.42□□□□□ -2.02
AFP-202ENST00000395792 KRTAP19-6Q3LI70 58 aa2.42□□□□□ -2.02
AFP-202ENST00000395792 KRTAP8-1Q8IUC2 63 aa2.42□□□□□ -2.02
AFP-202ENST00000395792 LCE3AQ5TA76 89 aa2.4□□□□□ -2.03
AFP-202ENST00000395792 KRTAP10-7P60409 375 aaPredicted RBP2.37□□□□□ -2.03
AFP-202ENST00000395792 USH2AO75445 5202 aa2.36□□□□□ -2.03
AFP-202ENST00000395792 KRTAP12-3P60328 96 aa2.33□□□□□ -2.04
AFP-202ENST00000395792 SSPOA2VEC9 5147 aa2.32□□□□□ -2.04
AFP-202ENST00000395792 LCE3CQ5T5A8 94 aa2.3□□□□□ -2.04
AFP-202ENST00000395792 KRTAP5-9P26371 169 aa2.29□□□□□ -2.04
AFP-202ENST00000395792 LCE1EQ5T753 118 aa2.28□□□□□ -2.04
AFP-202ENST00000395792 KRTAP19-5Q3LI72 72 aa2.26□□□□□ -2.05
AFP-202ENST00000395792 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
AFP-202ENST00000395792 KRTAP6-3Q3LI67 103 aa2.25□□□□□ -2.05
AFP-202ENST00000395792 KRTAP19-7Q3SYF9 63 aa2.23□□□□□ -2.05
AFP-202ENST00000395792 MT1EP04732 61 aa2.2□□□□□ -2.06
AFP-202ENST00000395792 KRTAP12-4P60329 112 aa2.2□□□□□ -2.06
AFP-202ENST00000395792 CRCT1Q9UGL9 99 aa2.19□□□□□ -2.06
AFP-202ENST00000395792 FCGBPQ9Y6R7 5405 aaPredicted RBP2.17□□□□□ -2.06
AFP-202ENST00000395792 MT1LQ93083 61 aa2.16□□□□□ -2.06
AFP-202ENST00000395792 MT1GP13640 62 aa2.14□□□□□ -2.07
AFP-202ENST00000395792 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
AFP-202ENST00000395792 KRTAP5-11Q6L8G4 156 aa2.12□□□□□ -2.07
AFP-202ENST00000395792 KRTAP19-3Q7Z4W3 81 aa2.12□□□□□ -2.07
AFP-202ENST00000395792 GPR98Q8WXG9 6306 aa2.12□□□□□ -2.07
AFP-202ENST00000395792 KMT2DO14686 5537 aa2.11□□□□□ -2.07
AFP-202ENST00000395792 KRTAP5-4Q6L8H1 288 aa2.08□□□□□ -2.08
AFP-202ENST00000395792 SPRR2FQ96RM1 72 aa2.08□□□□□ -2.08
AFP-202ENST00000395792 MT1MQ8N339 61 aa2.07□□□□□ -2.08
AFP-202ENST00000395792 FSIP2Q5CZC0 6907 aa2.05□□□□□ -2.08
AFP-202ENST00000395792 MACF1Q9UPN3 7388 aaKnown RBP2.01□□□□□ -2.09
AFP-202ENST00000395792 KRTAP5-1Q6L8H4 278 aa2.01□□□□□ -2.09
AFP-202ENST00000395792 KRTAP9-6A8MVA2 160 aa1.99□□□□□ -2.09
AFP-202ENST00000395792 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
AFP-202ENST00000395792 SPRR2EP22531 72 aa1.98□□□□□ -2.09
AFP-202ENST00000395792 SPRR2BP35325 72 aa1.98□□□□□ -2.09
AFP-202ENST00000395792 SPRR2AP35326 72 aa1.98□□□□□ -2.09
AFP-202ENST00000395792 KRTAP4-4Q9BYR3 166 aa1.97□□□□□ -2.09
AFP-202ENST00000395792 KRTAP2-3P0C7H8 128 aa1.96□□□□□ -2.1
AFP-202ENST00000395792 KRTAP2-4Q9BYR9 128 aa1.96□□□□□ -2.1
AFP-202ENST00000395792 KRTAP2-1Q9BYU5 128 aa1.96□□□□□ -2.1
AFP-202ENST00000395792 MUC12Q9UKN1 5478 aa1.94□□□□□ -2.1
AFP-202ENST00000395792 SYNE2Q8WXH0 6885 aaKnown RBP1.94□□□□□ -2.1
AFP-202ENST00000395792 KRTAP4-3Q9BYR4 195 aa1.93□□□□□ -2.1
AFP-202ENST00000395792 SPRR2DP22532 72 aa1.92□□□□□ -2.1
AFP-202ENST00000395792 KRTAP5-5Q701N2 237 aaPredicted RBP1.88□□□□□ -2.11
AFP-202ENST00000395792 MDN1Q9NU22 5596 aa1.87□□□□□ -2.11
AFP-202ENST00000395792 MT1AP04731 61 aa1.87□□□□□ -2.11
AFP-202ENST00000395792 NEBP20929 6669 aa1.86□□□□□ -2.11
AFP-202ENST00000395792 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
AFP-202ENST00000395792 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
AFP-202ENST00000395792 KRTAP6-1Q3LI64 71 aa1.79□□□□□ -2.12
AFP-202ENST00000395792 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
AFP-202ENST00000395792 KRTAP20-1Q3LI63 56 aa1.71□□□□□ -2.14
AFP-202ENST00000395792 DSTQ03001 7570 aaKnown RBP1.7□□□□□ -2.14
AFP-202ENST00000395792 SYNE1Q8NF91 8797 aaKnown RBP1.67□□□□□ -2.14
AFP-202ENST00000395792 KRTAP6-2Q3LI66 62 aa1.64□□□□□ -2.15
AFP-202ENST00000395792 KRTAP20-2Q3LI61 65 aa1.63□□□□□ -2.15
AFP-202ENST00000395792 PRM1P04553 51 aa1.62□□□□□ -2.15
AFP-202ENST00000395792 MT4P47944 62 aa1.6□□□□□ -2.15
AFP-202ENST00000395792 OBSCNQ5VST9 7968 aa1.51□□□□□ -2.17
AFP-202ENST00000395792 LCE1CQ5T751 118 aa1.47□□□□□ -2.17
AFP-202ENST00000395792 LCE1BQ5T7P3 118 aa1.47□□□□□ -2.17
AFP-202ENST00000395792 AHNAK2Q8IVF2 5795 aa1.39□□□□□ -2.19
AFP-202ENST00000395792 KRTAP5-10Q6L8G5 202 aa1.39□□□□□ -2.19
AFP-202ENST00000395792 KRTAP5-7Q6L8G8 165 aa1.39□□□□□ -2.19
AFP-202ENST00000395792 MUC5ACP98088 5654 aa1.31□□□□□ -2.2
AFP-202ENST00000395792 MUC19Q7Z5P9 8384 aa1.23□□□□□ -2.21
AFP-202ENST00000395792 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
AFP-202ENST00000395792 KRTAP21-2Q3LI59 83 aa1.19□□□□□ -2.22
AFP-202ENST00000395792 PHGR1C9JFL3 82 aa1.03□□□□□ -2.25
AFP-202ENST00000395792 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 102.4 ms