RNA–Protein interactions for RNA: ENST00000395388.6

HLA-DRA-202, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DRA, Length 1,280 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-202ENST00000395388 KRTAP5-9P26371 169 aa4.83□□□□□ -1.64
HLA-DRA-202ENST00000395388 KRTAP25-1Q3LHN0 102 aa4.82□□□□□ -1.64
HLA-DRA-202ENST00000395388 SPRR2FQ96RM1 72 aa4.81□□□□□ -1.64
HLA-DRA-202ENST00000395388 ROMO1P60602 79 aa4.78□□□□□ -1.64
HLA-DRA-202ENST00000395388 KMT2DO14686 5537 aa4.75□□□□□ -1.65
HLA-DRA-202ENST00000395388 LCE3AQ5TA76 89 aa4.72□□□□□ -1.65
HLA-DRA-202ENST00000395388 SPRR2EP22531 72 aa4.66□□□□□ -1.66
HLA-DRA-202ENST00000395388 SPRR2BP35325 72 aa4.66□□□□□ -1.66
HLA-DRA-202ENST00000395388 SPRR2AP35326 72 aa4.66□□□□□ -1.66
HLA-DRA-202ENST00000395388 KRTAP19-5Q3LI72 72 aa4.66□□□□□ -1.66
HLA-DRA-202ENST00000395388 KRTAP19-7Q3SYF9 63 aa4.65□□□□□ -1.67
HLA-DRA-202ENST00000395388 LCE1AQ5T7P2 110 aa4.63□□□□□ -1.67
HLA-DRA-202ENST00000395388 MT1EP04732 61 aa4.61□□□□□ -1.67
HLA-DRA-202ENST00000395388 PMAIP1Q13794 54 aa4.59□□□□□ -1.67
HLA-DRA-202ENST00000395388 PP632Q6XCG6 107 aa4.59□□□□□ -1.67
HLA-DRA-202ENST00000395388 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
HLA-DRA-202ENST00000395388 MUC12Q9UKN1 5478 aa4.55□□□□□ -1.68
HLA-DRA-202ENST00000395388 NEBP20929 6669 aa4.53□□□□□ -1.68
HLA-DRA-202ENST00000395388 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
HLA-DRA-202ENST00000395388 PRO0628Q9UI54 55 aa4.53□□□□□ -1.68
HLA-DRA-202ENST00000395388 SPRR2DP22532 72 aa4.51□□□□□ -1.69
HLA-DRA-202ENST00000395388 MT1GP13640 62 aa4.48□□□□□ -1.69
HLA-DRA-202ENST00000395388 MT1LQ93083 61 aa4.47□□□□□ -1.69
HLA-DRA-202ENST00000395388 MDN1Q9NU22 5596 aa4.46□□□□□ -1.7
HLA-DRA-202ENST00000395388 KRTAP20-1Q3LI63 56 aa4.44□□□□□ -1.7
HLA-DRA-202ENST00000395388 KRTAP2-3P0C7H8 128 aa4.43□□□□□ -1.7
HLA-DRA-202ENST00000395388 KRTAP2-4Q9BYR9 128 aa4.43□□□□□ -1.7
HLA-DRA-202ENST00000395388 MT1MQ8N339 61 aa4.38□□□□□ -1.71
HLA-DRA-202ENST00000395388 MT3P25713 68 aa4.34□□□□□ -1.71
HLA-DRA-202ENST00000395388 PRAC1Q96KF2 57 aa4.33□□□□□ -1.72
HLA-DRA-202ENST00000395388 KRTAP2-2Q9BYT5 123 aa4.31□□□□□ -1.72
HLA-DRA-202ENST00000395388 KRTAP2-1Q9BYU5 128 aa4.31□□□□□ -1.72
HLA-DRA-202ENST00000395388 KTN1-AS1Q86SY8 53 aa4.25□□□□□ -1.73
HLA-DRA-202ENST00000395388 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
HLA-DRA-202ENST00000395388 KRTAP4-3Q9BYR4 195 aa4.23□□□□□ -1.73
HLA-DRA-202ENST00000395388 DSTQ03001 7570 aaKnown RBP4.21□□□□□ -1.73
HLA-DRA-202ENST00000395388 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
HLA-DRA-202ENST00000395388 KRTAP5-4Q6L8H1 288 aa3.94□□□□□ -1.78
HLA-DRA-202ENST00000395388 KRTAP5-5Q701N2 237 aaPredicted RBP3.94□□□□□ -1.78
HLA-DRA-202ENST00000395388 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
HLA-DRA-202ENST00000395388 MT4P47944 62 aa3.91□□□□□ -1.78
HLA-DRA-202ENST00000395388 LCE1FQ5T754 118 aa3.91□□□□□ -1.78
HLA-DRA-202ENST00000395388 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
HLA-DRA-202ENST00000395388 MT1AP04731 61 aa3.83□□□□□ -1.8
HLA-DRA-202ENST00000395388 SPRR5A0A1B0GTR4 108 aa3.82□□□□□ -1.8
HLA-DRA-202ENST00000395388 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
HLA-DRA-202ENST00000395388 KRTAP20-2Q3LI61 65 aa3.72□□□□□ -1.81
HLA-DRA-202ENST00000395388 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.72□□□□□ -1.81
HLA-DRA-202ENST00000395388 SYNE1Q8NF91 8797 aaKnown RBP3.71□□□□□ -1.82
HLA-DRA-202ENST00000395388 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
HLA-DRA-202ENST00000395388 KRTAP5-11Q6L8G4 156 aa3.68□□□□□ -1.82
HLA-DRA-202ENST00000395388 HMCN1Q96RW7 5635 aa3.66□□□□□ -1.82
HLA-DRA-202ENST00000395388 LUZP6Q538Z0 58 aa3.66□□□□□ -1.82
HLA-DRA-202ENST00000395388 KRTAP6-2Q3LI66 62 aa3.54□□□□□ -1.84
HLA-DRA-202ENST00000395388 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
HLA-DRA-202ENST00000395388 KRTAP5-2Q701N4 177 aa3.5□□□□□ -1.85
HLA-DRA-202ENST00000395388 KRTAP5-10Q6L8G5 202 aa3.4□□□□□ -1.87
HLA-DRA-202ENST00000395388 AHNAK2Q8IVF2 5795 aa3.37□□□□□ -1.87
HLA-DRA-202ENST00000395388 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
HLA-DRA-202ENST00000395388 KRTAP5-7Q6L8G8 165 aa3.24□□□□□ -1.89
HLA-DRA-202ENST00000395388 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
HLA-DRA-202ENST00000395388 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
HLA-DRA-202ENST00000395388 KRTAP5-8O75690 187 aa3.18□□□□□ -1.9
HLA-DRA-202ENST00000395388 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.91
HLA-DRA-202ENST00000395388 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
HLA-DRA-202ENST00000395388 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
HLA-DRA-202ENST00000395388 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
HLA-DRA-202ENST00000395388 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
HLA-DRA-202ENST00000395388 MUC5BQ9HC84 5762 aaPredicted RBP2.72□□□□□ -1.97
HLA-DRA-202ENST00000395388 INE1O15225 51 aa2.69□□□□□ -1.98
HLA-DRA-202ENST00000395388 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
HLA-DRA-202ENST00000395388 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
HLA-DRA-202ENST00000395388 PRM1P04553 51 aa2.45□□□□□ -2.02
HLA-DRA-202ENST00000395388 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
HLA-DRA-202ENST00000395388 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
HLA-DRA-202ENST00000395388 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
HLA-DRA-202ENST00000395388 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 49.5 ms