RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 K7ERS5 55 aa3.44□□□□□ -1.86
ATG4A-205ENST00000394892 LUZP6Q538Z0 58 aa3.44□□□□□ -1.86
ATG4A-205ENST00000394892 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
ATG4A-205ENST00000394892 SPTSSBQ8NFR3 76 aa3.42□□□□□ -1.86
ATG4A-205ENST00000394892 CHKB-CPT1BH3BT56 60 aa3.41□□□□□ -1.86
ATG4A-205ENST00000394892 CAMK2N1Q7Z7J9 78 aa3.41□□□□□ -1.86
ATG4A-205ENST00000394892 SPANXA2-OT1Q8N9U9 137 aa3.41□□□□□ -1.86
ATG4A-205ENST00000394892 CDC42SE1Q9NRR8 79 aa3.39□□□□□ -1.87
ATG4A-205ENST00000394892 A6NED7 52 aa3.38□□□□□ -1.87
ATG4A-205ENST00000394892 ROMO1P60602 79 aa3.38□□□□□ -1.87
ATG4A-205ENST00000394892 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
ATG4A-205ENST00000394892 DSTQ03001 7570 aaKnown RBP3.34□□□□□ -1.87
ATG4A-205ENST00000394892 COA5Q86WW8 74 aa3.34□□□□□ -1.87
ATG4A-205ENST00000394892 MT1EP04732 61 aa3.32□□□□□ -1.88
ATG4A-205ENST00000394892 A0A0D9SG42 100 aa3.29□□□□□ -1.88
ATG4A-205ENST00000394892 SPATA8Q6RVD6 105 aa3.29□□□□□ -1.88
ATG4A-205ENST00000394892 KRTAP12-1P59990 96 aa3.27□□□□□ -1.89
ATG4A-205ENST00000394892 KRTAP19-3Q7Z4W3 81 aa3.27□□□□□ -1.89
ATG4A-205ENST00000394892 A8MU10 97 aa3.26□□□□□ -1.89
ATG4A-205ENST00000394892 MIR22HGQ0VDD5 57 aa3.25□□□□□ -1.89
ATG4A-205ENST00000394892 KRTAP19-5Q3LI72 72 aa3.24□□□□□ -1.89
ATG4A-205ENST00000394892 A0A1B0GU33 70 aa3.22□□□□□ -1.89
ATG4A-205ENST00000394892 SPINT4Q6UDR6 99 aa3.21□□□□□ -1.9
ATG4A-205ENST00000394892 PRR15LQ9BU68 103 aa3.18□□□□□ -1.9
ATG4A-205ENST00000394892 MT1GP13640 62 aa3.17□□□□□ -1.9
ATG4A-205ENST00000394892 MT4P47944 62 aa3.17□□□□□ -1.9
ATG4A-205ENST00000394892 PP632Q6XCG6 107 aa3.17□□□□□ -1.9
ATG4A-205ENST00000394892 MT1LQ93083 61 aa3.17□□□□□ -1.9
ATG4A-205ENST00000394892 MT1MQ8N339 61 aa3.16□□□□□ -1.9
ATG4A-205ENST00000394892 C10orf95Q9H7T3 257 aa3.15□□□□□ -1.91
ATG4A-205ENST00000394892 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
ATG4A-205ENST00000394892 KRTAP4-3Q9BYR4 195 aa3.14□□□□□ -1.91
ATG4A-205ENST00000394892 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
ATG4A-205ENST00000394892 A0A1B0GU69 56 aa3.11□□□□□ -1.91
ATG4A-205ENST00000394892 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
ATG4A-205ENST00000394892 KRTAP25-1Q3LHN0 102 aa3.1□□□□□ -1.91
ATG4A-205ENST00000394892 KRTAP5-10Q6L8G5 202 aa3.1□□□□□ -1.91
ATG4A-205ENST00000394892 LINC01558Q9Y6Z2 57 aa3.1□□□□□ -1.91
ATG4A-205ENST00000394892 KRTAP5-4Q6L8H1 288 aa3.06□□□□□ -1.92
ATG4A-205ENST00000394892 TNP1P09430 55 aa3.04□□□□□ -1.92
ATG4A-205ENST00000394892 KRTAP5-7Q6L8G8 165 aa3.03□□□□□ -1.92
ATG4A-205ENST00000394892 AHNAK2Q8IVF2 5795 aa3.03□□□□□ -1.92
ATG4A-205ENST00000394892 UQCR11O14957 56 aa3.02□□□□□ -1.93
ATG4A-205ENST00000394892 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.01□□□□□ -1.93
ATG4A-205ENST00000394892 MT3P25713 68 aa3□□□□□ -1.93
ATG4A-205ENST00000394892 KRTAP12-3P60328 96 aa2.98□□□□□ -1.93
ATG4A-205ENST00000394892 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
ATG4A-205ENST00000394892 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
ATG4A-205ENST00000394892 KRTAP5-5Q701N2 237 aaPredicted RBP2.93□□□□□ -1.94
ATG4A-205ENST00000394892 KRTAP20-2Q3LI61 65 aa2.89□□□□□ -1.95
ATG4A-205ENST00000394892 KRTAP12-4P60329 112 aa2.88□□□□□ -1.95
ATG4A-205ENST00000394892 SYNE1Q8NF91 8797 aaKnown RBP2.84□□□□□ -1.95
ATG4A-205ENST00000394892 LCE1EQ5T753 118 aa2.81□□□□□ -1.96
ATG4A-205ENST00000394892 LCE3CQ5T5A8 94 aa2.75□□□□□ -1.97
ATG4A-205ENST00000394892 INE1O15225 51 aa2.73□□□□□ -1.97
ATG4A-205ENST00000394892 KRTAP9-6A8MVA2 160 aa2.7□□□□□ -1.98
ATG4A-205ENST00000394892 KRTAP6-1Q3LI64 71 aa2.7□□□□□ -1.98
ATG4A-205ENST00000394892 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
ATG4A-205ENST00000394892 MT1AP04731 61 aa2.67□□□□□ -1.98
ATG4A-205ENST00000394892 AHNAKQ09666 5890 aaKnown RBP2.62□□□□□ -1.99
ATG4A-205ENST00000394892 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
ATG4A-205ENST00000394892 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
ATG4A-205ENST00000394892 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
ATG4A-205ENST00000394892 KRTAP6-2Q3LI66 62 aa2.57□□□□□ -2
ATG4A-205ENST00000394892 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
ATG4A-205ENST00000394892 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
ATG4A-205ENST00000394892 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
ATG4A-205ENST00000394892 OBSCNQ5VST9 7968 aa2.46□□□□□ -2.02
ATG4A-205ENST00000394892 LCE1BQ5T7P3 118 aa2.14□□□□□ -2.07
ATG4A-205ENST00000394892 LCE3EQ5T5B0 92 aa2.11□□□□□ -2.07
ATG4A-205ENST00000394892 LCE1CQ5T751 118 aa2.09□□□□□ -2.07
ATG4A-205ENST00000394892 LCE3DQ9BYE3 92 aa1.94□□□□□ -2.1
ATG4A-205ENST00000394892 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
ATG4A-205ENST00000394892 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
ATG4A-205ENST00000394892 MUC19Q7Z5P9 8384 aa1.54□□□□□ -2.16
ATG4A-205ENST00000394892 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
ATG4A-205ENST00000394892 PRM1P04553 51 aa1.39□□□□□ -2.19
ATG4A-205ENST00000394892 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 84.9 ms