RNA–Protein interactions for RNA: ENST00000393417.7

MDM2-213, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5

Gene MDM2, Length 1,683 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-213ENST00000393417 CAMK2N1Q7Z7J9 78 aa3.02□□□□□ -1.93
MDM2-213ENST00000393417 A6NED7 52 aa3.01□□□□□ -1.93
MDM2-213ENST00000393417 KRTAP10-12P60413 245 aa3.01□□□□□ -1.93
MDM2-213ENST00000393417 DSTQ03001 7570 aaKnown RBP3.01□□□□□ -1.93
MDM2-213ENST00000393417 COA5Q86WW8 74 aa3□□□□□ -1.93
MDM2-213ENST00000393417 CYSTM1Q9H1C7 97 aa3□□□□□ -1.93
MDM2-213ENST00000393417 GPR98Q8WXG9 6306 aa2.97□□□□□ -1.93
MDM2-213ENST00000393417 ATP5EP56381 51 aaPredicted RBP2.97□□□□□ -1.93
MDM2-213ENST00000393417 H7BZZ5 65 aa2.95□□□□□ -1.94
MDM2-213ENST00000393417 SPATA8Q6RVD6 105 aa2.91□□□□□ -1.94
MDM2-213ENST00000393417 A0A0D9SG42 100 aa2.9□□□□□ -1.95
MDM2-213ENST00000393417 A0A1B0GU33 70 aa2.86□□□□□ -1.95
MDM2-213ENST00000393417 KRTAP12-1P59990 96 aa2.86□□□□□ -1.95
MDM2-213ENST00000393417 Q1T7F1 81 aa2.86□□□□□ -1.95
MDM2-213ENST00000393417 KRTAP19-7Q3SYF9 63 aa2.85□□□□□ -1.95
MDM2-213ENST00000393417 MT1EP04732 61 aa2.84□□□□□ -1.95
MDM2-213ENST00000393417 ROMO1P60602 79 aa2.84□□□□□ -1.95
MDM2-213ENST00000393417 SPINT4Q6UDR6 99 aa2.84□□□□□ -1.95
MDM2-213ENST00000393417 KRTAP19-3Q7Z4W3 81 aa2.82□□□□□ -1.96
MDM2-213ENST00000393417 HMCN1Q96RW7 5635 aa2.81□□□□□ -1.96
MDM2-213ENST00000393417 A0A1B0GU69 56 aa2.81□□□□□ -1.96
MDM2-213ENST00000393417 A8MU10 97 aa2.81□□□□□ -1.96
MDM2-213ENST00000393417 MT4P47944 62 aa2.79□□□□□ -1.96
MDM2-213ENST00000393417 KRTAP19-5Q3LI72 72 aa2.77□□□□□ -1.97
MDM2-213ENST00000393417 CDC42SE1Q9NRR8 79 aa2.77□□□□□ -1.97
MDM2-213ENST00000393417 MIR22HGQ0VDD5 57 aa2.76□□□□□ -1.97
MDM2-213ENST00000393417 AHNAK2Q8IVF2 5795 aa2.76□□□□□ -1.97
MDM2-213ENST00000393417 NDUFAF8A1L188 74 aa2.75□□□□□ -1.97
MDM2-213ENST00000393417 C10orf95Q9H7T3 257 aa2.74□□□□□ -1.97
MDM2-213ENST00000393417 LINC01558Q9Y6Z2 57 aa2.73□□□□□ -1.97
MDM2-213ENST00000393417 MT1MQ8N339 61 aa2.72□□□□□ -1.97
MDM2-213ENST00000393417 KRTAP4-3Q9BYR4 195 aa2.72□□□□□ -1.97
MDM2-213ENST00000393417 MT1GP13640 62 aa2.71□□□□□ -1.98
MDM2-213ENST00000393417 LCE3AQ5TA76 89 aa2.71□□□□□ -1.98
MDM2-213ENST00000393417 PRR15LQ9BU68 103 aa2.69□□□□□ -1.98
MDM2-213ENST00000393417 MT1LQ93083 61 aa2.69□□□□□ -1.98
MDM2-213ENST00000393417 PP632Q6XCG6 107 aa2.68□□□□□ -1.98
MDM2-213ENST00000393417 TNP1P09430 55 aa2.67□□□□□ -1.98
MDM2-213ENST00000393417 KRTAP25-1Q3LHN0 102 aa2.66□□□□□ -1.98
MDM2-213ENST00000393417 KRTAP5-10Q6L8G5 202 aa2.66□□□□□ -1.98
MDM2-213ENST00000393417 KRTAP5-4Q6L8H1 288 aa2.64□□□□□ -1.99
MDM2-213ENST00000393417 UQCR11O14957 56 aa2.63□□□□□ -1.99
MDM2-213ENST00000393417 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.63□□□□□ -1.99
MDM2-213ENST00000393417 KRTAP12-3P60328 96 aa2.59□□□□□ -2
MDM2-213ENST00000393417 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
MDM2-213ENST00000393417 MT3P25713 68 aa2.53□□□□□ -2
MDM2-213ENST00000393417 KRTAP20-2Q3LI61 65 aa2.53□□□□□ -2
MDM2-213ENST00000393417 SPRR5A0A1B0GTR4 108 aa2.5□□□□□ -2.01
MDM2-213ENST00000393417 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
MDM2-213ENST00000393417 SYNE1Q8NF91 8797 aaKnown RBP2.47□□□□□ -2.01
MDM2-213ENST00000393417 KRTAP12-4P60329 112 aa2.43□□□□□ -2.02
MDM2-213ENST00000393417 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
MDM2-213ENST00000393417 LCE3CQ5T5A8 94 aa2.38□□□□□ -2.03
MDM2-213ENST00000393417 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
MDM2-213ENST00000393417 LCE1FQ5T754 118 aa2.34□□□□□ -2.04
MDM2-213ENST00000393417 KRTAP9-6A8MVA2 160 aa2.31□□□□□ -2.04
MDM2-213ENST00000393417 INE1O15225 51 aa2.31□□□□□ -2.04
MDM2-213ENST00000393417 OBSCNQ5VST9 7968 aa2.3□□□□□ -2.04
MDM2-213ENST00000393417 KRTAP6-1Q3LI64 71 aa2.3□□□□□ -2.04
MDM2-213ENST00000393417 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
MDM2-213ENST00000393417 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
MDM2-213ENST00000393417 MT1AP04731 61 aa2.28□□□□□ -2.05
MDM2-213ENST00000393417 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
MDM2-213ENST00000393417 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
MDM2-213ENST00000393417 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
MDM2-213ENST00000393417 KRTAP6-2Q3LI66 62 aa2.22□□□□□ -2.05
MDM2-213ENST00000393417 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
MDM2-213ENST00000393417 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
MDM2-213ENST00000393417 LCE3EQ5T5B0 92 aa2.02□□□□□ -2.09
MDM2-213ENST00000393417 LCE1BQ5T7P3 118 aa1.89□□□□□ -2.11
MDM2-213ENST00000393417 LCE1CQ5T751 118 aa1.77□□□□□ -2.13
MDM2-213ENST00000393417 LCE3DQ9BYE3 92 aa1.71□□□□□ -2.14
MDM2-213ENST00000393417 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
MDM2-213ENST00000393417 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
MDM2-213ENST00000393417 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.18
MDM2-213ENST00000393417 PRM1P04553 51 aa1.23□□□□□ -2.21
MDM2-213ENST00000393417 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
MDM2-213ENST00000393417 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 97.5 ms