RNA–Protein interactions for RNA: ENST00000392919.4

GNPTAB-202, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 1 (best) BASIC

Gene GNPTAB, Length 760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-202ENST00000392919 KRTAP19-3Q7Z4W3 81 aa9.94□□□□□ -0.82
GNPTAB-202ENST00000392919 KRTAP25-1Q3LHN0 102 aa9.84□□□□□ -0.83
GNPTAB-202ENST00000392919 DSTQ03001 7570 aaKnown RBP9.82□□□□□ -0.84
GNPTAB-202ENST00000392919 CDC42SE1Q9NRR8 79 aa9.8□□□□□ -0.84
GNPTAB-202ENST00000392919 KRTAP4-9Q9BYQ8 210 aa9.71□□□□□ -0.86
GNPTAB-202ENST00000392919 MT1GP13640 62 aa9.68□□□□□ -0.86
GNPTAB-202ENST00000392919 MT1LQ93083 61 aa9.68□□□□□ -0.86
GNPTAB-202ENST00000392919 KRTAP12-3P60328 96 aa9.63□□□□□ -0.87
GNPTAB-202ENST00000392919 ROMO1P60602 79 aa9.56□□□□□ -0.88
GNPTAB-202ENST00000392919 PP632Q6XCG6 107 aa9.55□□□□□ -0.88
GNPTAB-202ENST00000392919 MT1MQ8N339 61 aa9.55□□□□□ -0.88
GNPTAB-202ENST00000392919 KRTAP23-1A1A580 65 aa9.51□□□□□ -0.89
GNPTAB-202ENST00000392919 LCE1DQ5T752 114 aa9.43□□□□□ -0.9
GNPTAB-202ENST00000392919 KRTAP4-3Q9BYR4 195 aa9.41□□□□□ -0.9
GNPTAB-202ENST00000392919 GPR98Q8WXG9 6306 aa9.39□□□□□ -0.91
GNPTAB-202ENST00000392919 LCE4AQ5TA78 99 aa9.34□□□□□ -0.91
GNPTAB-202ENST00000392919 MT4P47944 62 aa9.32□□□□□ -0.92
GNPTAB-202ENST00000392919 KRTAP4-7Q9BYR0 210 aa9.26□□□□□ -0.93
GNPTAB-202ENST00000392919 BRK1Q8WUW1 75 aa9.22□□□□□ -0.93
GNPTAB-202ENST00000392919 KRTAP5-4Q6L8H1 288 aa9.18□□□□□ -0.94
GNPTAB-202ENST00000392919 HMCN1Q96RW7 5635 aa9.17□□□□□ -0.94
GNPTAB-202ENST00000392919 KRTAP15-1Q3LI76 137 aa9.15□□□□□ -0.94
GNPTAB-202ENST00000392919 KRTAP19-4Q3LI73 84 aa9.08□□□□□ -0.96
GNPTAB-202ENST00000392919 KRTAP4-6Q9BYQ5 205 aa9.07□□□□□ -0.96
GNPTAB-202ENST00000392919 LCE3CQ5T5A8 94 aa8.92□□□□□ -0.98
GNPTAB-202ENST00000392919 AHNAK2Q8IVF2 5795 aa8.88□□□□□ -0.99
GNPTAB-202ENST00000392919 KRTAP5-10Q6L8G5 202 aa8.83□□□□□ -1
GNPTAB-202ENST00000392919 KRTAP5-5Q701N2 237 aaPredicted RBP8.77□□□□□ -1.01
GNPTAB-202ENST00000392919 LOC100996750A0A140TA64 210 aa8.74□□□□□ -1.01
GNPTAB-202ENST00000392919 PMAIP1Q13794 54 aa8.68□□□□□ -1.02
GNPTAB-202ENST00000392919 KRTAP20-2Q3LI61 65 aa8.68□□□□□ -1.02
GNPTAB-202ENST00000392919 KRTAP5-3Q6L8H2 238 aa8.6□□□□□ -1.03
GNPTAB-202ENST00000392919 SPRR5A0A1B0GTR4 108 aa8.58□□□□□ -1.04
GNPTAB-202ENST00000392919 KRTAP12-4P60329 112 aa8.52□□□□□ -1.05
GNPTAB-202ENST00000392919 KRTAP5-7Q6L8G8 165 aa8.47□□□□□ -1.05
GNPTAB-202ENST00000392919 KRTAP9-6A8MVA2 160 aa8.45□□□□□ -1.06
GNPTAB-202ENST00000392919 SYNE1Q8NF91 8797 aaKnown RBP8.44□□□□□ -1.06
GNPTAB-202ENST00000392919 PRO0628Q9UI54 55 aa8.42□□□□□ -1.06
GNPTAB-202ENST00000392919 PRAC1Q96KF2 57 aa8.31□□□□□ -1.08
GNPTAB-202ENST00000392919 MT1AP04731 61 aa8.24□□□□□ -1.09
GNPTAB-202ENST00000392919 KRTAP6-1Q3LI64 71 aa8.18□□□□□ -1.1
GNPTAB-202ENST00000392919 KRTAP5-2Q701N4 177 aa8.02□□□□□ -1.13
GNPTAB-202ENST00000392919 KTN1-AS1Q86SY8 53 aa7.95□□□□□ -1.14
GNPTAB-202ENST00000392919 KRTAP4-11Q9BYQ6 195 aa7.95□□□□□ -1.14
GNPTAB-202ENST00000392919 KRTAP9-4Q9BYQ2 154 aa7.91□□□□□ -1.14
GNPTAB-202ENST00000392919 KRTAP6-2Q3LI66 62 aa7.77□□□□□ -1.17
GNPTAB-202ENST00000392919 KRTAP5-8O75690 187 aa7.71□□□□□ -1.18
GNPTAB-202ENST00000392919 SVIPQ8NHG7 77 aa7.55□□□□□ -1.2
GNPTAB-202ENST00000392919 MT3P25713 68 aa7.5□□□□□ -1.21
GNPTAB-202ENST00000392919 OBSCNQ5VST9 7968 aa7.48□□□□□ -1.21
GNPTAB-202ENST00000392919 MUC5ACP98088 5654 aa7.34□□□□□ -1.23
GNPTAB-202ENST00000392919 MUC5BQ9HC84 5762 aaPredicted RBP7.3□□□□□ -1.24
GNPTAB-202ENST00000392919 AHNAKQ09666 5890 aaKnown RBP7.29□□□□□ -1.24
GNPTAB-202ENST00000392919 KRTAP9-9Q9BYP9 154 aa7.28□□□□□ -1.24
GNPTAB-202ENST00000392919 KRTAP5-1Q6L8H4 278 aa7.23□□□□□ -1.25
GNPTAB-202ENST00000392919 LUZP6Q538Z0 58 aa6.87□□□□□ -1.31
GNPTAB-202ENST00000392919 LCE1EQ5T753 118 aa6.81□□□□□ -1.32
GNPTAB-202ENST00000392919 KRTAP4-2Q9BYR5 136 aa6.52□□□□□ -1.37
GNPTAB-202ENST00000392919 LCE3DQ9BYE3 92 aa6.51□□□□□ -1.37
GNPTAB-202ENST00000392919 LCE1BQ5T7P3 118 aa6.49□□□□□ -1.37
GNPTAB-202ENST00000392919 LCE1CQ5T751 118 aa6.34□□□□□ -1.39
GNPTAB-202ENST00000392919 LCE3EQ5T5B0 92 aa6.2□□□□□ -1.42
GNPTAB-202ENST00000392919 KRTAP4-12Q9BQ66 201 aa5.99□□□□□ -1.45
GNPTAB-202ENST00000392919 NDUFAF8A1L188 74 aa5.97□□□□□ -1.45
GNPTAB-202ENST00000392919 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.8□□□□□ -1.48
GNPTAB-202ENST00000392919 KRTAP5-11Q6L8G4 156 aa5.75□□□□□ -1.49
GNPTAB-202ENST00000392919 LCE1FQ5T754 118 aa5.59□□□□□ -1.51
GNPTAB-202ENST00000392919 KRTAP21-2Q3LI59 83 aa5.39□□□□□ -1.55
GNPTAB-202ENST00000392919 H3BS24 57 aa5.17□□□□□ -1.58
GNPTAB-202ENST00000392919 PHGR1C9JFL3 82 aa5.14□□□□□ -1.59
GNPTAB-202ENST00000392919 KRTAP4-4Q9BYR3 166 aa4.96□□□□□ -1.62
GNPTAB-202ENST00000392919 PRM1P04553 51 aa4.92□□□□□ -1.62
GNPTAB-202ENST00000392919 A0A0A0MQY5 61 aa4.86□□□□□ -1.63
GNPTAB-202ENST00000392919 INE1O15225 51 aa4.83□□□□□ -1.64
GNPTAB-202ENST00000392919 MUC19Q7Z5P9 8384 aa4.64□□□□□ -1.67
GNPTAB-202ENST00000392919 KRTAP21-1Q3LI58 79 aa3.86□□□□□ -1.79
GNPTAB-202ENST00000392919 MUC16Q8WXI7 14507 aa3.25□□□□□ -1.89
Retrieved 77 of 20,778 RNA–protein pairs in 10.4 ms