RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 SPRR2DP22532 72 aa4.53□□□□□ -1.68
RFC4-202ENST00000392481 KRTAP4-11Q9BYQ6 195 aa4.53□□□□□ -1.68
RFC4-202ENST00000392481 A8MU10 97 aa4.48□□□□□ -1.69
RFC4-202ENST00000392481 KRTAP15-1Q3LI76 137 aa4.46□□□□□ -1.69
RFC4-202ENST00000392481 KRTAP2-2Q9BYT5 123 aa4.46□□□□□ -1.69
RFC4-202ENST00000392481 KRTAP2-1Q9BYU5 128 aa4.46□□□□□ -1.69
RFC4-202ENST00000392481 A6NED7 52 aa4.45□□□□□ -1.7
RFC4-202ENST00000392481 KRTAP19-7Q3SYF9 63 aa4.45□□□□□ -1.7
RFC4-202ENST00000392481 BRK1Q8WUW1 75 aa4.41□□□□□ -1.7
RFC4-202ENST00000392481 UQCR11O14957 56 aa4.4□□□□□ -1.7
RFC4-202ENST00000392481 MT1EP04732 61 aa4.4□□□□□ -1.7
RFC4-202ENST00000392481 MIR22HGQ0VDD5 57 aa4.37□□□□□ -1.71
RFC4-202ENST00000392481 CDC42SE1Q9NRR8 79 aa4.37□□□□□ -1.71
RFC4-202ENST00000392481 KRTAP19-3Q7Z4W3 81 aa4.36□□□□□ -1.71
RFC4-202ENST00000392481 C10orf95Q9H7T3 257 aa4.36□□□□□ -1.71
RFC4-202ENST00000392481 KRTAP19-5Q3LI72 72 aa4.35□□□□□ -1.71
RFC4-202ENST00000392481 TNP1P09430 55 aa4.34□□□□□ -1.71
RFC4-202ENST00000392481 PRO0628Q9UI54 55 aa4.31□□□□□ -1.72
RFC4-202ENST00000392481 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
RFC4-202ENST00000392481 MT1GP13640 62 aa4.27□□□□□ -1.73
RFC4-202ENST00000392481 PP632Q6XCG6 107 aa4.23□□□□□ -1.73
RFC4-202ENST00000392481 MT1LQ93083 61 aa4.22□□□□□ -1.73
RFC4-202ENST00000392481 DSTQ03001 7570 aaKnown RBP4.2□□□□□ -1.74
RFC4-202ENST00000392481 MT1MQ8N339 61 aa4.19□□□□□ -1.74
RFC4-202ENST00000392481 K7ERS5 55 aa4.18□□□□□ -1.74
RFC4-202ENST00000392481 PMAIP1Q13794 54 aa4.16□□□□□ -1.74
RFC4-202ENST00000392481 KRTAP25-1Q3LHN0 102 aa4.14□□□□□ -1.75
RFC4-202ENST00000392481 KRTAP12-3P60328 96 aa4.13□□□□□ -1.75
RFC4-202ENST00000392481 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
RFC4-202ENST00000392481 KRTAP4-3Q9BYR4 195 aa4.06□□□□□ -1.76
RFC4-202ENST00000392481 A0A0A0MQY5 61 aa4□□□□□ -1.77
RFC4-202ENST00000392481 ROMO1P60602 79 aa4□□□□□ -1.77
RFC4-202ENST00000392481 KTN1-AS1Q86SY8 53 aa3.99□□□□□ -1.77
RFC4-202ENST00000392481 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.77
RFC4-202ENST00000392481 HMCN1Q96RW7 5635 aa3.96□□□□□ -1.78
RFC4-202ENST00000392481 MT4P47944 62 aa3.95□□□□□ -1.78
RFC4-202ENST00000392481 PRAC1Q96KF2 57 aa3.91□□□□□ -1.78
RFC4-202ENST00000392481 GPR98Q8WXG9 6306 aa3.89□□□□□ -1.79
RFC4-202ENST00000392481 KRTAP5-5Q701N2 237 aaPredicted RBP3.84□□□□□ -1.79
RFC4-202ENST00000392481 LCE3CQ5T5A8 94 aa3.81□□□□□ -1.8
RFC4-202ENST00000392481 AHNAK2Q8IVF2 5795 aa3.77□□□□□ -1.81
RFC4-202ENST00000392481 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
RFC4-202ENST00000392481 KRTAP12-4P60329 112 aa3.73□□□□□ -1.81
RFC4-202ENST00000392481 KRTAP20-2Q3LI61 65 aa3.72□□□□□ -1.81
RFC4-202ENST00000392481 KRTAP5-10Q6L8G5 202 aa3.68□□□□□ -1.82
RFC4-202ENST00000392481 SYNE1Q8NF91 8797 aaKnown RBP3.62□□□□□ -1.83
RFC4-202ENST00000392481 MT1AP04731 61 aa3.6□□□□□ -1.83
RFC4-202ENST00000392481 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
RFC4-202ENST00000392481 MT3P25713 68 aa3.56□□□□□ -1.84
RFC4-202ENST00000392481 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
RFC4-202ENST00000392481 KRTAP5-7Q6L8G8 165 aa3.53□□□□□ -1.85
RFC4-202ENST00000392481 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
RFC4-202ENST00000392481 KRTAP6-2Q3LI66 62 aa3.39□□□□□ -1.87
RFC4-202ENST00000392481 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
RFC4-202ENST00000392481 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
RFC4-202ENST00000392481 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
RFC4-202ENST00000392481 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
RFC4-202ENST00000392481 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
RFC4-202ENST00000392481 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
RFC4-202ENST00000392481 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
RFC4-202ENST00000392481 MUC5BQ9HC84 5762 aaPredicted RBP3.1□□□□□ -1.91
RFC4-202ENST00000392481 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.91
RFC4-202ENST00000392481 MUC5ACP98088 5654 aa3.09□□□□□ -1.91
RFC4-202ENST00000392481 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.92
RFC4-202ENST00000392481 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
RFC4-202ENST00000392481 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
RFC4-202ENST00000392481 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
RFC4-202ENST00000392481 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
RFC4-202ENST00000392481 LCE3EQ5T5B0 92 aa2.67□□□□□ -1.98
RFC4-202ENST00000392481 INE1O15225 51 aa2.57□□□□□ -2
RFC4-202ENST00000392481 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
RFC4-202ENST00000392481 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
RFC4-202ENST00000392481 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
RFC4-202ENST00000392481 PRM1P04553 51 aa2.09□□□□□ -2.07
RFC4-202ENST00000392481 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
RFC4-202ENST00000392481 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
RFC4-202ENST00000392481 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 9.5 ms