RNA–Protein interactions for RNA: ENST00000392169.6

SDHC-203, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-203ENST00000392169 A6NED7 52 aa2.57□□□□□ -2
SDHC-203ENST00000392169 SPATA8Q6RVD6 105 aa2.57□□□□□ -2
SDHC-203ENST00000392169 A0A1B0GU33 70 aa2.56□□□□□ -2
SDHC-203ENST00000392169 SPINT4Q6UDR6 99 aa2.55□□□□□ -2
SDHC-203ENST00000392169 A8MU10 97 aa2.54□□□□□ -2
SDHC-203ENST00000392169 LCE5AQ5TCM9 118 aa2.54□□□□□ -2
SDHC-203ENST00000392169 KTN1-AS1Q86SY8 53 aa2.54□□□□□ -2
SDHC-203ENST00000392169 KRTAP19-7Q3SYF9 63 aa2.53□□□□□ -2
SDHC-203ENST00000392169 KRTAP12-1P59990 96 aa2.52□□□□□ -2.01
SDHC-203ENST00000392169 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
SDHC-203ENST00000392169 MT1EP04732 61 aa2.51□□□□□ -2.01
SDHC-203ENST00000392169 A0A1B0GU69 56 aa2.5□□□□□ -2.01
SDHC-203ENST00000392169 KRTAP19-3Q7Z4W3 81 aa2.5□□□□□ -2.01
SDHC-203ENST00000392169 UQCR11O14957 56 aa2.47□□□□□ -2.01
SDHC-203ENST00000392169 KRTAP19-5Q3LI72 72 aa2.47□□□□□ -2.01
SDHC-203ENST00000392169 MIR22HGQ0VDD5 57 aa2.46□□□□□ -2.02
SDHC-203ENST00000392169 MT1GP13640 62 aa2.44□□□□□ -2.02
SDHC-203ENST00000392169 DSTQ03001 7570 aaKnown RBP2.43□□□□□ -2.02
SDHC-203ENST00000392169 KRTAP4-9Q9BYQ8 210 aa2.43□□□□□ -2.02
SDHC-203ENST00000392169 PP632Q6XCG6 107 aa2.42□□□□□ -2.02
SDHC-203ENST00000392169 TNP1P09430 55 aa2.41□□□□□ -2.02
SDHC-203ENST00000392169 C10orf95Q9H7T3 257 aa2.41□□□□□ -2.02
SDHC-203ENST00000392169 LCE3AQ5TA76 89 aa2.4□□□□□ -2.03
SDHC-203ENST00000392169 MT1LQ93083 61 aa2.4□□□□□ -2.03
SDHC-203ENST00000392169 MT1MQ8N339 61 aa2.39□□□□□ -2.03
SDHC-203ENST00000392169 LCE1DQ5T752 114 aa2.37□□□□□ -2.03
SDHC-203ENST00000392169 KRTAP4-3Q9BYR4 195 aa2.35□□□□□ -2.03
SDHC-203ENST00000392169 MT4P47944 62 aa2.34□□□□□ -2.03
SDHC-203ENST00000392169 NDUFAF8A1L188 74 aa2.32□□□□□ -2.04
SDHC-203ENST00000392169 K7ERS5 55 aa2.32□□□□□ -2.04
SDHC-203ENST00000392169 KRTAP12-3P60328 96 aa2.31□□□□□ -2.04
SDHC-203ENST00000392169 KRTAP25-1Q3LHN0 102 aa2.29□□□□□ -2.04
SDHC-203ENST00000392169 KRTAP4-7Q9BYR0 210 aa2.29□□□□□ -2.04
SDHC-203ENST00000392169 HMCN1Q96RW7 5635 aa2.29□□□□□ -2.04
SDHC-203ENST00000392169 KRTAP5-4Q6L8H1 288 aa2.28□□□□□ -2.04
SDHC-203ENST00000392169 ROMO1P60602 79 aa2.26□□□□□ -2.05
SDHC-203ENST00000392169 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
SDHC-203ENST00000392169 SPRR5A0A1B0GTR4 108 aa2.25□□□□□ -2.05
SDHC-203ENST00000392169 KRTAP4-11Q9BYQ6 195 aa2.25□□□□□ -2.05
SDHC-203ENST00000392169 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
SDHC-203ENST00000392169 MT3P25713 68 aa2.19□□□□□ -2.06
SDHC-203ENST00000392169 KRTAP5-5Q701N2 237 aaPredicted RBP2.19□□□□□ -2.06
SDHC-203ENST00000392169 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
SDHC-203ENST00000392169 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
SDHC-203ENST00000392169 KRTAP12-4P60329 112 aa2.16□□□□□ -2.06
SDHC-203ENST00000392169 KRTAP5-3Q6L8H2 238 aa2.15□□□□□ -2.07
SDHC-203ENST00000392169 KRTAP4-2Q9BYR5 136 aa2.14□□□□□ -2.07
SDHC-203ENST00000392169 LCE3CQ5T5A8 94 aa2.12□□□□□ -2.07
SDHC-203ENST00000392169 SYNE1Q8NF91 8797 aaKnown RBP2.1□□□□□ -2.07
SDHC-203ENST00000392169 LCE1FQ5T754 118 aa2.08□□□□□ -2.08
SDHC-203ENST00000392169 MT1AP04731 61 aa2.03□□□□□ -2.08
SDHC-203ENST00000392169 KRTAP6-1Q3LI64 71 aa2.03□□□□□ -2.08
SDHC-203ENST00000392169 KRTAP9-6A8MVA2 160 aa2□□□□□ -2.09
SDHC-203ENST00000392169 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
SDHC-203ENST00000392169 KRTAP6-2Q3LI66 62 aa1.95□□□□□ -2.1
SDHC-203ENST00000392169 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
SDHC-203ENST00000392169 LUZP6Q538Z0 58 aa1.91□□□□□ -2.1
SDHC-203ENST00000392169 MUC5ACP98088 5654 aa1.87□□□□□ -2.11
SDHC-203ENST00000392169 AHNAKQ09666 5890 aaKnown RBP1.85□□□□□ -2.11
SDHC-203ENST00000392169 OBSCNQ5VST9 7968 aa1.84□□□□□ -2.11
SDHC-203ENST00000392169 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
SDHC-203ENST00000392169 KRTAP5-1Q6L8H4 278 aa1.8□□□□□ -2.12
SDHC-203ENST00000392169 LCE3EQ5T5B0 92 aa1.73□□□□□ -2.13
SDHC-203ENST00000392169 LCE1EQ5T753 118 aa1.72□□□□□ -2.13
SDHC-203ENST00000392169 INE1O15225 51 aa1.7□□□□□ -2.14
SDHC-203ENST00000392169 LCE1BQ5T7P3 118 aa1.64□□□□□ -2.15
SDHC-203ENST00000392169 LCE1CQ5T751 118 aa1.6□□□□□ -2.15
SDHC-203ENST00000392169 KRTAP5-11Q6L8G4 156 aa1.53□□□□□ -2.16
SDHC-203ENST00000392169 LCE3DQ9BYE3 92 aa1.53□□□□□ -2.16
SDHC-203ENST00000392169 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.44□□□□□ -2.18
SDHC-203ENST00000392169 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
SDHC-203ENST00000392169 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
SDHC-203ENST00000392169 KRTAP4-4Q9BYR3 166 aa1.24□□□□□ -2.21
SDHC-203ENST00000392169 PRM1P04553 51 aa1.18□□□□□ -2.22
SDHC-203ENST00000392169 MUC19Q7Z5P9 8384 aa1.15□□□□□ -2.23
SDHC-203ENST00000392169 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
SDHC-203ENST00000392169 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 96.1 ms