RNA–Protein interactions for RNA: ENST00000391089.1

SNORA48.4-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 134 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.4-201ENST00000391089 INE1O15225 51 aa1.98□□□□□ -2.09
SNORA48.4-201ENST00000391089 LCE3CQ5T5A8 94 aa1.97□□□□□ -2.09
SNORA48.4-201ENST00000391089 KMT2DO14686 5537 aa1.95□□□□□ -2.1
SNORA48.4-201ENST00000391089 KRTAP19-5Q3LI72 72 aa1.94□□□□□ -2.1
SNORA48.4-201ENST00000391089 KRTAP19-7Q3SYF9 63 aa1.9□□□□□ -2.11
SNORA48.4-201ENST00000391089 MT1EP04732 61 aa1.89□□□□□ -2.11
SNORA48.4-201ENST00000391089 KRTAP2-3P0C7H8 128 aa1.89□□□□□ -2.11
SNORA48.4-201ENST00000391089 KRTAP2-4Q9BYR9 128 aa1.89□□□□□ -2.11
SNORA48.4-201ENST00000391089 KRTAP5-9P26371 169 aa1.88□□□□□ -2.11
SNORA48.4-201ENST00000391089 MT1GP13640 62 aa1.87□□□□□ -2.11
SNORA48.4-201ENST00000391089 MT1LQ93083 61 aa1.87□□□□□ -2.11
SNORA48.4-201ENST00000391089 KRTAP4-8A0A0G2JLE6 195 aa1.83□□□□□ -2.12
SNORA48.4-201ENST00000391089 SPRR2EP22531 72 aa1.83□□□□□ -2.12
SNORA48.4-201ENST00000391089 SPRR2BP35325 72 aa1.83□□□□□ -2.12
SNORA48.4-201ENST00000391089 SPRR2AP35326 72 aa1.83□□□□□ -2.12
SNORA48.4-201ENST00000391089 SPRR2FQ96RM1 72 aa1.83□□□□□ -2.12
SNORA48.4-201ENST00000391089 KRTAP4-8Q9BYQ9 185 aa1.83□□□□□ -2.12
SNORA48.4-201ENST00000391089 KRTAP2-1Q9BYU5 128 aa1.83□□□□□ -2.12
SNORA48.4-201ENST00000391089 KRTAP2-2Q9BYT5 123 aa1.82□□□□□ -2.12
SNORA48.4-201ENST00000391089 GPR98Q8WXG9 6306 aa1.81□□□□□ -2.12
SNORA48.4-201ENST00000391089 KRTAP19-3Q7Z4W3 81 aa1.81□□□□□ -2.12
SNORA48.4-201ENST00000391089 SPRR2DP22532 72 aa1.78□□□□□ -2.12
SNORA48.4-201ENST00000391089 LCE5AQ5TCM9 118 aa1.77□□□□□ -2.13
SNORA48.4-201ENST00000391089 KRTAP9-6A8MVA2 160 aa1.75□□□□□ -2.13
SNORA48.4-201ENST00000391089 LCE1AQ5T7P2 110 aa1.75□□□□□ -2.13
SNORA48.4-201ENST00000391089 MT1MQ8N339 61 aa1.75□□□□□ -2.13
SNORA48.4-201ENST00000391089 LCE3BQ5TA77 95 aa1.74□□□□□ -2.13
SNORA48.4-201ENST00000391089 DSTQ03001 7570 aaKnown RBP1.73□□□□□ -2.13
SNORA48.4-201ENST00000391089 MT1AP04731 61 aa1.67□□□□□ -2.14
SNORA48.4-201ENST00000391089 KRTAP4-7Q9BYR0 210 aa1.66□□□□□ -2.14
SNORA48.4-201ENST00000391089 KRTAP4-9Q9BYQ8 210 aa1.64□□□□□ -2.15
SNORA48.4-201ENST00000391089 HMCN1Q96RW7 5635 aa1.64□□□□□ -2.15
SNORA48.4-201ENST00000391089 AHNAK2Q8IVF2 5795 aa1.61□□□□□ -2.15
SNORA48.4-201ENST00000391089 KRTAP5-5Q701N2 237 aaPredicted RBP1.6□□□□□ -2.15
SNORA48.4-201ENST00000391089 LCE1DQ5T752 114 aa1.58□□□□□ -2.16
SNORA48.4-201ENST00000391089 LOC100996750A0A140TA64 210 aa1.56□□□□□ -2.16
SNORA48.4-201ENST00000391089 MT4P47944 62 aa1.56□□□□□ -2.16
SNORA48.4-201ENST00000391089 KRTAP4-3Q9BYR4 195 aa1.56□□□□□ -2.16
SNORA48.4-201ENST00000391089 LCE4AQ5TA78 99 aa1.55□□□□□ -2.16
SNORA48.4-201ENST00000391089 KRTAP12-4P60329 112 aa1.54□□□□□ -2.16
SNORA48.4-201ENST00000391089 KRTAP5-10Q6L8G5 202 aa1.54□□□□□ -2.16
SNORA48.4-201ENST00000391089 KRTAP9-4Q9BYQ2 154 aa1.53□□□□□ -2.16
SNORA48.4-201ENST00000391089 LCE3DQ9BYE3 92 aa1.52□□□□□ -2.17
SNORA48.4-201ENST00000391089 MT3P25713 68 aa1.51□□□□□ -2.17
SNORA48.4-201ENST00000391089 KRTAP6-1Q3LI64 71 aa1.51□□□□□ -2.17
SNORA48.4-201ENST00000391089 LCE3EQ5T5B0 92 aa1.51□□□□□ -2.17
SNORA48.4-201ENST00000391089 KRTAP5-4Q6L8H1 288 aa1.5□□□□□ -2.17
SNORA48.4-201ENST00000391089 KRTAP5-7Q6L8G8 165 aa1.49□□□□□ -2.17
SNORA48.4-201ENST00000391089 KRTAP5-3Q6L8H2 238 aa1.47□□□□□ -2.17
SNORA48.4-201ENST00000391089 KRTAP4-6Q9BYQ5 205 aa1.47□□□□□ -2.17
SNORA48.4-201ENST00000391089 SYNE1Q8NF91 8797 aaKnown RBP1.43□□□□□ -2.18
SNORA48.4-201ENST00000391089 KRTAP20-2Q3LI61 65 aa1.4□□□□□ -2.19
SNORA48.4-201ENST00000391089 AHNAKQ09666 5890 aaKnown RBP1.39□□□□□ -2.19
SNORA48.4-201ENST00000391089 KRTAP9-9Q9BYP9 154 aa1.39□□□□□ -2.19
SNORA48.4-201ENST00000391089 KRTAP6-2Q3LI66 62 aa1.38□□□□□ -2.19
SNORA48.4-201ENST00000391089 KRTAP5-2Q701N4 177 aa1.38□□□□□ -2.19
SNORA48.4-201ENST00000391089 MUC5ACP98088 5654 aa1.36□□□□□ -2.19
SNORA48.4-201ENST00000391089 MUC5BQ9HC84 5762 aaPredicted RBP1.36□□□□□ -2.19
SNORA48.4-201ENST00000391089 LCE1EQ5T753 118 aa1.35□□□□□ -2.19
SNORA48.4-201ENST00000391089 KRTAP4-11Q9BYQ6 195 aa1.32□□□□□ -2.2
SNORA48.4-201ENST00000391089 OBSCNQ5VST9 7968 aa1.31□□□□□ -2.2
SNORA48.4-201ENST00000391089 LCE1FQ5T754 118 aa1.3□□□□□ -2.2
SNORA48.4-201ENST00000391089 PRM1P04553 51 aa1.29□□□□□ -2.2
SNORA48.4-201ENST00000391089 KRTAP5-8O75690 187 aa1.28□□□□□ -2.2
SNORA48.4-201ENST00000391089 LCE1CQ5T751 118 aa1.22□□□□□ -2.21
SNORA48.4-201ENST00000391089 LCE1BQ5T7P3 118 aa1.22□□□□□ -2.21
SNORA48.4-201ENST00000391089 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.19□□□□□ -2.22
SNORA48.4-201ENST00000391089 KRTAP4-12Q9BQ66 201 aa1.17□□□□□ -2.22
SNORA48.4-201ENST00000391089 KRTAP5-1Q6L8H4 278 aa1.16□□□□□ -2.22
SNORA48.4-201ENST00000391089 KRTAP4-2Q9BYR5 136 aa1.11□□□□□ -2.23
SNORA48.4-201ENST00000391089 KRTAP5-11Q6L8G4 156 aa1.06□□□□□ -2.24
SNORA48.4-201ENST00000391089 KRTAP21-2Q3LI59 83 aa1.02□□□□□ -2.25
SNORA48.4-201ENST00000391089 PHGR1C9JFL3 82 aa0.93□□□□□ -2.26
SNORA48.4-201ENST00000391089 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
SNORA48.4-201ENST00000391089 MUC19Q7Z5P9 8384 aa0.82□□□□□ -2.28
SNORA48.4-201ENST00000391089 KRTAP4-4Q9BYR3 166 aa0.77□□□□□ -2.29
SNORA48.4-201ENST00000391089 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 62.8 ms