RNA–Protein interactions for RNA: ENST00000390687.8

SNRPN-202, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-202ENST00000390687 SPINT4Q6UDR6 99 aa5.68□□□□□ -1.5
SNRPN-202ENST00000390687 KRTAP12-1P59990 96 aa5.66□□□□□ -1.5
SNRPN-202ENST00000390687 ROMO1P60602 79 aa5.65□□□□□ -1.5
SNRPN-202ENST00000390687 KRTAP19-7Q3SYF9 63 aa5.61□□□□□ -1.51
SNRPN-202ENST00000390687 LCE3BQ5TA77 95 aa5.6□□□□□ -1.51
SNRPN-202ENST00000390687 DSTQ03001 7570 aaKnown RBP5.56□□□□□ -1.52
SNRPN-202ENST00000390687 MT1EP04732 61 aa5.54□□□□□ -1.52
SNRPN-202ENST00000390687 LCE5AQ5TCM9 118 aa5.51□□□□□ -1.53
SNRPN-202ENST00000390687 KRTAP19-3Q7Z4W3 81 aa5.48□□□□□ -1.53
SNRPN-202ENST00000390687 KRTAP19-5Q3LI72 72 aa5.47□□□□□ -1.53
SNRPN-202ENST00000390687 C10orf95Q9H7T3 257 aa5.43□□□□□ -1.54
SNRPN-202ENST00000390687 H3BS24 57 aa5.41□□□□□ -1.54
SNRPN-202ENST00000390687 TNP1P09430 55 aa5.37□□□□□ -1.55
SNRPN-202ENST00000390687 MT1GP13640 62 aa5.37□□□□□ -1.55
SNRPN-202ENST00000390687 LCE3AQ5TA76 89 aa5.34□□□□□ -1.55
SNRPN-202ENST00000390687 MT1LQ93083 61 aa5.3□□□□□ -1.56
SNRPN-202ENST00000390687 PP632Q6XCG6 107 aa5.29□□□□□ -1.56
SNRPN-202ENST00000390687 MT1MQ8N339 61 aa5.28□□□□□ -1.56
SNRPN-202ENST00000390687 KRTAP15-1Q3LI76 137 aa5.26□□□□□ -1.57
SNRPN-202ENST00000390687 KRTAP9-9Q9BYP9 154 aa5.25□□□□□ -1.57
SNRPN-202ENST00000390687 KRTAP9-4Q9BYQ2 154 aa5.25□□□□□ -1.57
SNRPN-202ENST00000390687 KRTAP4-12Q9BQ66 201 aa5.23□□□□□ -1.57
SNRPN-202ENST00000390687 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
SNRPN-202ENST00000390687 KRTAP4-3Q9BYR4 195 aa5.18□□□□□ -1.58
SNRPN-202ENST00000390687 GPR98Q8WXG9 6306 aa5.14□□□□□ -1.59
SNRPN-202ENST00000390687 KRTAP12-3P60328 96 aa5.14□□□□□ -1.59
SNRPN-202ENST00000390687 HMCN1Q96RW7 5635 aa5.09□□□□□ -1.59
SNRPN-202ENST00000390687 LCE1DQ5T752 114 aa5.09□□□□□ -1.59
SNRPN-202ENST00000390687 LCE4AQ5TA78 99 aa5.08□□□□□ -1.6
SNRPN-202ENST00000390687 KRTAP4-7Q9BYR0 210 aa5.07□□□□□ -1.6
SNRPN-202ENST00000390687 NDUFAF8A1L188 74 aa5.07□□□□□ -1.6
SNRPN-202ENST00000390687 MT4P47944 62 aa5.04□□□□□ -1.6
SNRPN-202ENST00000390687 KRTAP5-4Q6L8H1 288 aa5.02□□□□□ -1.61
SNRPN-202ENST00000390687 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
SNRPN-202ENST00000390687 AHNAK2Q8IVF2 5795 aa4.9□□□□□ -1.63
SNRPN-202ENST00000390687 KRTAP5-5Q701N2 237 aaPredicted RBP4.85□□□□□ -1.63
SNRPN-202ENST00000390687 KRTAP19-4Q3LI73 84 aa4.83□□□□□ -1.64
SNRPN-202ENST00000390687 KRTAP4-2Q9BYR5 136 aa4.83□□□□□ -1.64
SNRPN-202ENST00000390687 LUZP6Q538Z0 58 aa4.82□□□□□ -1.64
SNRPN-202ENST00000390687 SYNE1Q8NF91 8797 aaKnown RBP4.78□□□□□ -1.64
SNRPN-202ENST00000390687 LCE3CQ5T5A8 94 aa4.75□□□□□ -1.65
SNRPN-202ENST00000390687 SPRR5A0A1B0GTR4 108 aa4.73□□□□□ -1.65
SNRPN-202ENST00000390687 KRTAP20-2Q3LI61 65 aa4.72□□□□□ -1.65
SNRPN-202ENST00000390687 KRTAP5-10Q6L8G5 202 aa4.72□□□□□ -1.65
SNRPN-202ENST00000390687 KRTAP12-4P60329 112 aa4.69□□□□□ -1.66
SNRPN-202ENST00000390687 A0A0A0MQY5 61 aa4.66□□□□□ -1.66
SNRPN-202ENST00000390687 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
SNRPN-202ENST00000390687 KRTAP5-3Q6L8H2 238 aa4.62□□□□□ -1.67
SNRPN-202ENST00000390687 KRTAP5-7Q6L8G8 165 aa4.51□□□□□ -1.69
SNRPN-202ENST00000390687 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
SNRPN-202ENST00000390687 MT1AP04731 61 aa4.5□□□□□ -1.69
SNRPN-202ENST00000390687 KRTAP6-1Q3LI64 71 aa4.49□□□□□ -1.69
SNRPN-202ENST00000390687 KRTAP5-2Q701N4 177 aa4.4□□□□□ -1.71
SNRPN-202ENST00000390687 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
SNRPN-202ENST00000390687 INE1O15225 51 aa4.28□□□□□ -1.72
SNRPN-202ENST00000390687 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
SNRPN-202ENST00000390687 KRTAP5-8O75690 187 aa4.17□□□□□ -1.74
SNRPN-202ENST00000390687 MT3P25713 68 aa4.12□□□□□ -1.75
SNRPN-202ENST00000390687 MUC5BQ9HC84 5762 aaPredicted RBP4.03□□□□□ -1.76
SNRPN-202ENST00000390687 AHNAKQ09666 5890 aaKnown RBP4.02□□□□□ -1.77
SNRPN-202ENST00000390687 MUC5ACP98088 5654 aa3.99□□□□□ -1.77
SNRPN-202ENST00000390687 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
SNRPN-202ENST00000390687 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
SNRPN-202ENST00000390687 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
SNRPN-202ENST00000390687 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
SNRPN-202ENST00000390687 LCE3DQ9BYE3 92 aa3.42□□□□□ -1.86
SNRPN-202ENST00000390687 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
SNRPN-202ENST00000390687 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
SNRPN-202ENST00000390687 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
SNRPN-202ENST00000390687 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
SNRPN-202ENST00000390687 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
SNRPN-202ENST00000390687 PRM1P04553 51 aa2.96□□□□□ -1.94
SNRPN-202ENST00000390687 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
SNRPN-202ENST00000390687 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
SNRPN-202ENST00000390687 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
SNRPN-202ENST00000390687 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
SNRPN-202ENST00000390687 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms