RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 VPS13CQ709C8 3753 aa-0.29□□□□□ -2.46
TRAJ39-201ENST00000390498 SMG1Q96Q15 3661 aaKnown RBP-0.29□□□□□ -2.46
TRAJ39-201ENST00000390498 NIPBLQ6KC79 2804 aaeCLIP-0.29□□□□□ -2.46
TRAJ39-201ENST00000390498 CFAP54Q96N23 3096 aa-0.29□□□□□ -2.46
TRAJ39-201ENST00000390498 MT1GP13640 62 aa-0.3□□□□□ -2.46
TRAJ39-201ENST00000390498 DEFB104AQ8WTQ1 72 aa-0.3□□□□□ -2.46
TRAJ39-201ENST00000390498 RYR2Q92736 4967 aa-0.3□□□□□ -2.46
TRAJ39-201ENST00000390498 K7EIM0 57 aa-0.31□□□□□ -2.46
TRAJ39-201ENST00000390498 MT2AP02795 61 aa-0.31□□□□□ -2.46
TRAJ39-201ENST00000390498 PRCDQ00LT1 54 aa-0.31□□□□□ -2.46
TRAJ39-201ENST00000390498 MT1MQ8N339 61 aa-0.31□□□□□ -2.46
TRAJ39-201ENST00000390498 CSMD2Q7Z408 3487 aa-0.31□□□□□ -2.46
TRAJ39-201ENST00000390498 CEP250Q9BV73 2442 aa-0.32□□□□□ -2.46
TRAJ39-201ENST00000390498 KIAA1109Q2LD37 5005 aa-0.32□□□□□ -2.46
TRAJ39-201ENST00000390498 TLN1Q9Y490 2541 aaKnown RBP-0.32□□□□□ -2.46
TRAJ39-201ENST00000390498 A0A096LNI7 61 aa-0.33□□□□□ -2.46
TRAJ39-201ENST00000390498 DEFB124Q8NES8 71 aa-0.33□□□□□ -2.46
TRAJ39-201ENST00000390498 ITPR2Q14571 2701 aa-0.34□□□□□ -2.46
TRAJ39-201ENST00000390498 H3BUX3 64 aa-0.34□□□□□ -2.46
TRAJ39-201ENST00000390498 DEFB133Q30KQ1 61 aa-0.34□□□□□ -2.46
TRAJ39-201ENST00000390498 RYR3Q15413 4870 aa-0.34□□□□□ -2.46
TRAJ39-201ENST00000390498 ATMQ13315 3056 aa-0.34□□□□□ -2.46
TRAJ39-201ENST00000390498 PRUNE2Q8WUY3 3088 aa-0.34□□□□□ -2.46
TRAJ39-201ENST00000390498 MYO15AQ9UKN7 3530 aa-0.35□□□□□ -2.47
TRAJ39-201ENST00000390498 CEP295Q9C0D2 2601 aa-0.35□□□□□ -2.47
TRAJ39-201ENST00000390498 FRYLO94915 3013 aa-0.35□□□□□ -2.47
TRAJ39-201ENST00000390498 RPS29P62273 56 aaKnown RBP-0.35□□□□□ -2.47
TRAJ39-201ENST00000390498 DMDP11532 3685 aa-0.36□□□□□ -2.47
TRAJ39-201ENST00000390498 HTN1P15515 57 aa-0.36□□□□□ -2.47
TRAJ39-201ENST00000390498 TTTY10Q9BZA0 68 aa-0.39□□□□□ -2.47
TRAJ39-201ENST00000390498 CD52P31358 61 aa-0.4□□□□□ -2.47
TRAJ39-201ENST00000390498 TMEM167AQ8TBQ9 72 aa-0.4□□□□□ -2.47
TRAJ39-201ENST00000390498 DNAH12Q6ZR08 3092 aa-0.41□□□□□ -2.47
TRAJ39-201ENST00000390498 WDFY4Q6ZS81 3184 aa-0.41□□□□□ -2.48
TRAJ39-201ENST00000390498 MT1BP07438 61 aa-0.41□□□□□ -2.48
TRAJ39-201ENST00000390498 FREM2Q5SZK8 3169 aa-0.42□□□□□ -2.48
TRAJ39-201ENST00000390498 PCNTO95613 3336 aa-0.42□□□□□ -2.48
TRAJ39-201ENST00000390498 MUC3AQ02505 3323 aa-0.42□□□□□ -2.48
TRAJ39-201ENST00000390498 H3BSH0 61 aa-0.43□□□□□ -2.48
TRAJ39-201ENST00000390498 SZT2Q5T011 3432 aa-0.44□□□□□ -2.48
TRAJ39-201ENST00000390498 CEP350Q5VT06 3117 aa-0.44□□□□□ -2.48
TRAJ39-201ENST00000390498 ABCA13Q86UQ4 5058 aa-0.45□□□□□ -2.48
TRAJ39-201ENST00000390498 XIRP2A4UGR9 3374 aa-0.45□□□□□ -2.48
TRAJ39-201ENST00000390498 WDFY3Q8IZQ1 3526 aa-0.46□□□□□ -2.48
TRAJ39-201ENST00000390498 MT1FP04733 61 aa-0.47□□□□□ -2.48
TRAJ39-201ENST00000390498 RPL39P5Q59GN2 51 aa-0.47□□□□□ -2.48
TRAJ39-201ENST00000390498 MKI67P46013 3256 aaKnown RBP-0.48□□□□□ -2.49
TRAJ39-201ENST00000390498 CENPEQ02224 2701 aa-0.49□□□□□ -2.49
TRAJ39-201ENST00000390498 DCHS1Q96JQ0 3298 aa-0.49□□□□□ -2.49
TRAJ39-201ENST00000390498 BOD1L1Q8NFC6 3051 aa-0.5□□□□□ -2.49
TRAJ39-201ENST00000390498 DEFB108AA8MXU0 73 aa-0.51□□□□□ -2.49
TRAJ39-201ENST00000390498 LINC01556Q5JQF7 62 aa-0.51□□□□□ -2.49
TRAJ39-201ENST00000390498 LOC400499M0QZD8 3231 aa-0.52□□□□□ -2.49
TRAJ39-201ENST00000390498 EP400Q96L91 3159 aa-0.53□□□□□ -2.49
TRAJ39-201ENST00000390498 SPEGQ15772 3267 aa-0.55□□□□□ -2.5
TRAJ39-201ENST00000390498 APELAP0DMC3 54 aa-0.55□□□□□ -2.5
TRAJ39-201ENST00000390498 ASPMQ8IZT6 3477 aa-0.57□□□□□ -2.5
TRAJ39-201ENST00000390498 A0A096LPF7 62 aa-0.57□□□□□ -2.5
TRAJ39-201ENST00000390498 USP34Q70CQ2 3546 aa-0.59□□□□□ -2.5
TRAJ39-201ENST00000390498 KRTAP20-1Q3LI63 56 aa-0.59□□□□□ -2.5
TRAJ39-201ENST00000390498 UNC80Q8N2C7 3258 aa-0.59□□□□□ -2.5
TRAJ39-201ENST00000390498 KRTAP19-2Q3LHN2 52 aa-0.6□□□□□ -2.51
TRAJ39-201ENST00000390498 Q9Y3F1 56 aa-0.6□□□□□ -2.51
TRAJ39-201ENST00000390498 CFAP47Q6ZTR5 3102 aa-0.6□□□□□ -2.51
TRAJ39-201ENST00000390498 BRCA2P51587 3418 aa-0.63□□□□□ -2.51
TRAJ39-201ENST00000390498 VCANP13611 3396 aa-0.68□□□□□ -2.52
TRAJ39-201ENST00000390498 HTN3P15516 51 aa-0.68□□□□□ -2.52
TRAJ39-201ENST00000390498 DNAH14Q0VDD8 3507 aa-0.68□□□□□ -2.52
TRAJ39-201ENST00000390498 CENPFP49454 3210 aa-0.7□□□□□ -2.52
TRAJ39-201ENST00000390498 DEFB108BQ8NET1 73 aa-0.73□□□□□ -2.53
TRAJ39-201ENST00000390498 COX14Q96I36 57 aa-0.73□□□□□ -2.53
TRAJ39-201ENST00000390498 KRTAP19-6Q3LI70 58 aa-0.74□□□□□ -2.53
TRAJ39-201ENST00000390498 UTRNP46939 3433 aa-0.75□□□□□ -2.53
TRAJ39-201ENST00000390498 CDH23Q9H251 3354 aa-0.76□□□□□ -2.53
TRAJ39-201ENST00000390498 VPS13AQ96RL7 3174 aa-0.76□□□□□ -2.53
TRAJ39-201ENST00000390498 GOLGB1Q14789 3259 aaKnown RBP-0.8□□□□□ -2.54
TRAJ39-201ENST00000390498 STATHP02808 62 aa-0.84□□□□□ -2.54
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms