RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 COA5Q86WW8 74 aa4.47□□□□□ -1.69
SOD1-202ENST00000389995 COX7CP15954 63 aa4.45□□□□□ -1.7
SOD1-202ENST00000389995 KRTAP19-3Q7Z4W3 81 aa4.45□□□□□ -1.7
SOD1-202ENST00000389995 KRTAP19-7Q3SYF9 63 aa4.44□□□□□ -1.7
SOD1-202ENST00000389995 MT1EP04732 61 aa4.41□□□□□ -1.7
SOD1-202ENST00000389995 KRTAP13-4Q3LI77 160 aa4.41□□□□□ -1.7
SOD1-202ENST00000389995 SERP1Q9Y6X1 66 aa4.4□□□□□ -1.71
SOD1-202ENST00000389995 CYSTM1Q9H1C7 97 aa4.39□□□□□ -1.71
SOD1-202ENST00000389995 A6NED7 52 aa4.37□□□□□ -1.71
SOD1-202ENST00000389995 H7BZZ5 65 aa4.37□□□□□ -1.71
SOD1-202ENST00000389995 MT3P25713 68 aa4.36□□□□□ -1.71
SOD1-202ENST00000389995 A0A0D9SG42 100 aa4.33□□□□□ -1.72
SOD1-202ENST00000389995 KRTAP5-7Q6L8G8 165 aa4.33□□□□□ -1.72
SOD1-202ENST00000389995 A0A1B0GU33 70 aa4.3□□□□□ -1.72
SOD1-202ENST00000389995 SPATA8Q6RVD6 105 aa4.3□□□□□ -1.72
SOD1-202ENST00000389995 MT1GP13640 62 aa4.27□□□□□ -1.73
SOD1-202ENST00000389995 KRTAP5-4Q6L8H1 288 aa4.27□□□□□ -1.73
SOD1-202ENST00000389995 SPINT4Q6UDR6 99 aa4.27□□□□□ -1.73
SOD1-202ENST00000389995 SPRR5A0A1B0GTR4 108 aa4.25□□□□□ -1.73
SOD1-202ENST00000389995 A0A1B0GU69 56 aa4.25□□□□□ -1.73
SOD1-202ENST00000389995 KRTAP4-3Q9BYR4 195 aa4.25□□□□□ -1.73
SOD1-202ENST00000389995 MT1MQ8N339 61 aa4.24□□□□□ -1.73
SOD1-202ENST00000389995 RPS28P62857 69 aaKnown RBP4.23□□□□□ -1.73
SOD1-202ENST00000389995 KRTAP19-5Q3LI72 72 aa4.23□□□□□ -1.73
SOD1-202ENST00000389995 CCDC179H3BU77 68 aa4.22□□□□□ -1.73
SOD1-202ENST00000389995 PP632Q6XCG6 107 aa4.21□□□□□ -1.74
SOD1-202ENST00000389995 KTN1-AS1Q86SY8 53 aa4.21□□□□□ -1.74
SOD1-202ENST00000389995 KRTAP12-1P59990 96 aa4.2□□□□□ -1.74
SOD1-202ENST00000389995 ATP5EP56381 51 aaPredicted RBP4.17□□□□□ -1.74
SOD1-202ENST00000389995 A8MU10 97 aa4.14□□□□□ -1.75
SOD1-202ENST00000389995 MT1LQ93083 61 aa4.14□□□□□ -1.75
SOD1-202ENST00000389995 PRR15LQ9BU68 103 aa4.14□□□□□ -1.75
SOD1-202ENST00000389995 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
SOD1-202ENST00000389995 TMEM258P61165 79 aa4.06□□□□□ -1.76
SOD1-202ENST00000389995 KRTAP25-1Q3LHN0 102 aa4.06□□□□□ -1.76
SOD1-202ENST00000389995 LINC01558Q9Y6Z2 57 aa4.06□□□□□ -1.76
SOD1-202ENST00000389995 TNP1P09430 55 aa4.02□□□□□ -1.77
SOD1-202ENST00000389995 LCE1FQ5T754 118 aa4□□□□□ -1.77
SOD1-202ENST00000389995 C10orf95Q9H7T3 257 aa4□□□□□ -1.77
SOD1-202ENST00000389995 UQCR11O14957 56 aa3.99□□□□□ -1.77
SOD1-202ENST00000389995 LCE3AQ5TA76 89 aa3.97□□□□□ -1.77
SOD1-202ENST00000389995 BRK1Q8WUW1 75 aa3.92□□□□□ -1.78
SOD1-202ENST00000389995 KRTAP5-5Q701N2 237 aaPredicted RBP3.91□□□□□ -1.78
SOD1-202ENST00000389995 MIR22HGQ0VDD5 57 aa3.9□□□□□ -1.79
SOD1-202ENST00000389995 KRTAP12-4P60329 112 aa3.89□□□□□ -1.79
SOD1-202ENST00000389995 AHNAKQ09666 5890 aaKnown RBP3.89□□□□□ -1.79
SOD1-202ENST00000389995 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
SOD1-202ENST00000389995 MUC5ACP98088 5654 aa3.86□□□□□ -1.79
SOD1-202ENST00000389995 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
SOD1-202ENST00000389995 MUC5BQ9HC84 5762 aaPredicted RBP3.82□□□□□ -1.8
SOD1-202ENST00000389995 KRTAP12-3P60328 96 aa3.82□□□□□ -1.8
SOD1-202ENST00000389995 Q1T7F1 81 aa3.8□□□□□ -1.8
SOD1-202ENST00000389995 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
SOD1-202ENST00000389995 KRTAP5-8O75690 187 aa3.75□□□□□ -1.81
SOD1-202ENST00000389995 ROMO1P60602 79 aa3.72□□□□□ -1.81
SOD1-202ENST00000389995 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.82
SOD1-202ENST00000389995 LCE3CQ5T5A8 94 aa3.69□□□□□ -1.82
SOD1-202ENST00000389995 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
SOD1-202ENST00000389995 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
SOD1-202ENST00000389995 CDC42SE1Q9NRR8 79 aa3.63□□□□□ -1.83
SOD1-202ENST00000389995 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
SOD1-202ENST00000389995 MT1AP04731 61 aa3.49□□□□□ -1.85
SOD1-202ENST00000389995 KRTAP6-2Q3LI66 62 aa3.48□□□□□ -1.85
SOD1-202ENST00000389995 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
SOD1-202ENST00000389995 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
SOD1-202ENST00000389995 KRTAP9-6A8MVA2 160 aa3.29□□□□□ -1.88
SOD1-202ENST00000389995 INE1O15225 51 aa3.19□□□□□ -1.9
SOD1-202ENST00000389995 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
SOD1-202ENST00000389995 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
SOD1-202ENST00000389995 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
SOD1-202ENST00000389995 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
SOD1-202ENST00000389995 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
SOD1-202ENST00000389995 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
SOD1-202ENST00000389995 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
SOD1-202ENST00000389995 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
SOD1-202ENST00000389995 PRM1P04553 51 aa1.82□□□□□ -2.12
SOD1-202ENST00000389995 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 365 ms