RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 ATP5EP56381 51 aaPredicted RBP3.47□□□□□ -1.85
IFT88-203ENST00000389373 MT1MQ8N339 61 aa3.46□□□□□ -1.86
IFT88-203ENST00000389373 KRTAP15-1Q3LI76 137 aa3.45□□□□□ -1.86
IFT88-203ENST00000389373 CAMK2N1Q7Z7J9 78 aa3.45□□□□□ -1.86
IFT88-203ENST00000389373 CCDC179H3BU77 68 aa3.44□□□□□ -1.86
IFT88-203ENST00000389373 KRTAP19-5Q3LI72 72 aa3.44□□□□□ -1.86
IFT88-203ENST00000389373 KRTAP4-3Q9BYR4 195 aa3.43□□□□□ -1.86
IFT88-203ENST00000389373 A0A0D9SG42 100 aa3.39□□□□□ -1.87
IFT88-203ENST00000389373 A0A1B0GU33 70 aa3.39□□□□□ -1.87
IFT88-203ENST00000389373 A0A1B0GU69 56 aa3.39□□□□□ -1.87
IFT88-203ENST00000389373 TMEM258P61165 79 aa3.39□□□□□ -1.87
IFT88-203ENST00000389373 KRTAP13-4Q3LI77 160 aa3.37□□□□□ -1.87
IFT88-203ENST00000389373 MT1LQ93083 61 aa3.37□□□□□ -1.87
IFT88-203ENST00000389373 PRR15LQ9BU68 103 aa3.37□□□□□ -1.87
IFT88-203ENST00000389373 KRTAP20-2Q3LI61 65 aa3.35□□□□□ -1.87
IFT88-203ENST00000389373 SMIM26A0A096LP01 95 aa3.33□□□□□ -1.88
IFT88-203ENST00000389373 SPATA8Q6RVD6 105 aa3.32□□□□□ -1.88
IFT88-203ENST00000389373 SPINT4Q6UDR6 99 aa3.29□□□□□ -1.88
IFT88-203ENST00000389373 LINC01558Q9Y6Z2 57 aa3.28□□□□□ -1.88
IFT88-203ENST00000389373 KRTAP12-1P59990 96 aa3.25□□□□□ -1.89
IFT88-203ENST00000389373 KRTAP12-4P60329 112 aa3.24□□□□□ -1.89
IFT88-203ENST00000389373 UQCR11O14957 56 aa3.23□□□□□ -1.89
IFT88-203ENST00000389373 V9GYY9 64 aa3.23□□□□□ -1.89
IFT88-203ENST00000389373 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.22□□□□□ -1.89
IFT88-203ENST00000389373 C10orf95Q9H7T3 257 aa3.22□□□□□ -1.89
IFT88-203ENST00000389373 A8MU10 97 aa3.21□□□□□ -1.9
IFT88-203ENST00000389373 LCE3AQ5TA76 89 aa3.17□□□□□ -1.9
IFT88-203ENST00000389373 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
IFT88-203ENST00000389373 K7ERS5 55 aa3.14□□□□□ -1.91
IFT88-203ENST00000389373 MIR22HGQ0VDD5 57 aa3.14□□□□□ -1.91
IFT88-203ENST00000389373 Q1T7F1 81 aa3.14□□□□□ -1.91
IFT88-203ENST00000389373 PCP4P48539 62 aa3.13□□□□□ -1.91
IFT88-203ENST00000389373 PSPHP1O15172 72 aa3.12□□□□□ -1.91
IFT88-203ENST00000389373 TNP1P09430 55 aa3.12□□□□□ -1.91
IFT88-203ENST00000389373 KRTAP5-8O75690 187 aa3.09□□□□□ -1.91
IFT88-203ENST00000389373 RPS28P62857 69 aaKnown RBP3.09□□□□□ -1.91
IFT88-203ENST00000389373 KRTAP5-11Q6L8G4 156 aa3.09□□□□□ -1.91
IFT88-203ENST00000389373 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
IFT88-203ENST00000389373 A6NED7 52 aa3.07□□□□□ -1.92
IFT88-203ENST00000389373 MUC5ACP98088 5654 aa3.05□□□□□ -1.92
IFT88-203ENST00000389373 KRTAP12-3P60328 96 aa3.03□□□□□ -1.92
IFT88-203ENST00000389373 AHNAKQ09666 5890 aaKnown RBP3.02□□□□□ -1.93
IFT88-203ENST00000389373 KRTAP25-1Q3LHN0 102 aa3.01□□□□□ -1.93
IFT88-203ENST00000389373 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
IFT88-203ENST00000389373 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
IFT88-203ENST00000389373 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
IFT88-203ENST00000389373 CDC42SE1Q9NRR8 79 aa2.95□□□□□ -1.94
IFT88-203ENST00000389373 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
IFT88-203ENST00000389373 ROMO1P60602 79 aa2.88□□□□□ -1.95
IFT88-203ENST00000389373 MT1AP04731 61 aa2.86□□□□□ -1.95
IFT88-203ENST00000389373 KRTAP6-2Q3LI66 62 aa2.84□□□□□ -1.95
IFT88-203ENST00000389373 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
IFT88-203ENST00000389373 SVIPQ8NHG7 77 aa2.78□□□□□ -1.96
IFT88-203ENST00000389373 KRTAP5-1Q6L8H4 278 aa2.76□□□□□ -1.97
IFT88-203ENST00000389373 LCE3CQ5T5A8 94 aa2.75□□□□□ -1.97
IFT88-203ENST00000389373 BRK1Q8WUW1 75 aa2.75□□□□□ -1.97
IFT88-203ENST00000389373 MT3P25713 68 aa2.74□□□□□ -1.97
IFT88-203ENST00000389373 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
IFT88-203ENST00000389373 KRTAP9-6A8MVA2 160 aa2.59□□□□□ -1.99
IFT88-203ENST00000389373 PMAIP1Q13794 54 aa2.59□□□□□ -1.99
IFT88-203ENST00000389373 PRO0628Q9UI54 55 aa2.48□□□□□ -2.01
IFT88-203ENST00000389373 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
IFT88-203ENST00000389373 PRAC1Q96KF2 57 aa2.41□□□□□ -2.02
IFT88-203ENST00000389373 KTN1-AS1Q86SY8 53 aa2.36□□□□□ -2.03
IFT88-203ENST00000389373 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
IFT88-203ENST00000389373 A0A0A0MQY5 61 aa2.3□□□□□ -2.04
IFT88-203ENST00000389373 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
IFT88-203ENST00000389373 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
IFT88-203ENST00000389373 LUZP6Q538Z0 58 aa2.14□□□□□ -2.07
IFT88-203ENST00000389373 LCE3DQ9BYE3 92 aa1.98□□□□□ -2.09
IFT88-203ENST00000389373 LCE3EQ5T5B0 92 aa1.92□□□□□ -2.1
IFT88-203ENST00000389373 NDUFAF8A1L188 74 aa1.88□□□□□ -2.11
IFT88-203ENST00000389373 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
IFT88-203ENST00000389373 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
IFT88-203ENST00000389373 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
IFT88-203ENST00000389373 INE1O15225 51 aa1.46□□□□□ -2.18
IFT88-203ENST00000389373 PRM1P04553 51 aa1.45□□□□□ -2.18
IFT88-203ENST00000389373 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 68.3 ms