RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 MT1GP13640 62 aa9.61□□□□□ -0.87
NPHP3-202ENST00000383282 KRTAP19-5Q3LI72 72 aa9.58□□□□□ -0.88
NPHP3-202ENST00000383282 PP632Q6XCG6 107 aa9.58□□□□□ -0.88
NPHP3-202ENST00000383282 LCE1DQ5T752 114 aa9.53□□□□□ -0.88
NPHP3-202ENST00000383282 C10orf95Q9H7T3 257 aa9.51□□□□□ -0.89
NPHP3-202ENST00000383282 TNP1P09430 55 aa9.47□□□□□ -0.89
NPHP3-202ENST00000383282 LCE4AQ5TA78 99 aa9.46□□□□□ -0.9
NPHP3-202ENST00000383282 MT1MQ8N339 61 aa9.41□□□□□ -0.9
NPHP3-202ENST00000383282 MT4P47944 62 aa9.4□□□□□ -0.9
NPHP3-202ENST00000383282 CDC42SE1Q9NRR8 79 aa9.37□□□□□ -0.91
NPHP3-202ENST00000383282 HMCN1Q96RW7 5635 aa9.37□□□□□ -0.91
NPHP3-202ENST00000383282 MT1LQ93083 61 aa9.36□□□□□ -0.91
NPHP3-202ENST00000383282 KRTAP25-1Q3LHN0 102 aa9.19□□□□□ -0.94
NPHP3-202ENST00000383282 LCE3AQ5TA76 89 aa9.19□□□□□ -0.94
NPHP3-202ENST00000383282 KRTAP5-4Q6L8H1 288 aa9.17□□□□□ -0.94
NPHP3-202ENST00000383282 KRTAP4-3Q9BYR4 195 aa9.17□□□□□ -0.94
NPHP3-202ENST00000383282 AHNAK2Q8IVF2 5795 aa9.11□□□□□ -0.95
NPHP3-202ENST00000383282 KRTAP4-6Q9BYQ5 205 aa9.06□□□□□ -0.96
NPHP3-202ENST00000383282 ROMO1P60602 79 aa9.03□□□□□ -0.96
NPHP3-202ENST00000383282 KRTAP5-10Q6L8G5 202 aa9.03□□□□□ -0.96
NPHP3-202ENST00000383282 BRK1Q8WUW1 75 aa8.99□□□□□ -0.97
NPHP3-202ENST00000383282 KRTAP12-3P60328 96 aa8.86□□□□□ -0.99
NPHP3-202ENST00000383282 KRTAP4-7Q9BYR0 210 aa8.86□□□□□ -0.99
NPHP3-202ENST00000383282 KRTAP23-1A1A580 65 aa8.83□□□□□ -1
NPHP3-202ENST00000383282 KRTAP5-3Q6L8H2 238 aa8.76□□□□□ -1.01
NPHP3-202ENST00000383282 KRTAP5-7Q6L8G8 165 aa8.74□□□□□ -1.01
NPHP3-202ENST00000383282 KRTAP20-2Q3LI61 65 aa8.7□□□□□ -1.02
NPHP3-202ENST00000383282 KRTAP5-5Q701N2 237 aaPredicted RBP8.64□□□□□ -1.03
NPHP3-202ENST00000383282 SPRR5A0A1B0GTR4 108 aa8.63□□□□□ -1.03
NPHP3-202ENST00000383282 KRTAP12-4P60329 112 aa8.59□□□□□ -1.03
NPHP3-202ENST00000383282 PMAIP1Q13794 54 aa8.47□□□□□ -1.05
NPHP3-202ENST00000383282 KRTAP15-1Q3LI76 137 aa8.45□□□□□ -1.06
NPHP3-202ENST00000383282 LOC100996750A0A140TA64 210 aa8.41□□□□□ -1.06
NPHP3-202ENST00000383282 SYNE1Q8NF91 8797 aaKnown RBP8.39□□□□□ -1.07
NPHP3-202ENST00000383282 KRTAP19-4Q3LI73 84 aa8.37□□□□□ -1.07
NPHP3-202ENST00000383282 PRO0628Q9UI54 55 aa8.29□□□□□ -1.08
NPHP3-202ENST00000383282 LCE3CQ5T5A8 94 aa8.18□□□□□ -1.1
NPHP3-202ENST00000383282 KRTAP4-11Q9BYQ6 195 aa8.04□□□□□ -1.12
NPHP3-202ENST00000383282 PRAC1Q96KF2 57 aa7.99□□□□□ -1.13
NPHP3-202ENST00000383282 MT1AP04731 61 aa7.97□□□□□ -1.13
NPHP3-202ENST00000383282 KRTAP5-2Q701N4 177 aa7.96□□□□□ -1.14
NPHP3-202ENST00000383282 KRTAP6-1Q3LI64 71 aa7.93□□□□□ -1.14
NPHP3-202ENST00000383282 KTN1-AS1Q86SY8 53 aa7.82□□□□□ -1.16
NPHP3-202ENST00000383282 KRTAP5-8O75690 187 aa7.76□□□□□ -1.17
NPHP3-202ENST00000383282 KRTAP9-4Q9BYQ2 154 aa7.74□□□□□ -1.17
NPHP3-202ENST00000383282 KRTAP6-2Q3LI66 62 aa7.65□□□□□ -1.18
NPHP3-202ENST00000383282 KRTAP9-6A8MVA2 160 aa7.63□□□□□ -1.19
NPHP3-202ENST00000383282 OBSCNQ5VST9 7968 aa7.62□□□□□ -1.19
NPHP3-202ENST00000383282 AHNAKQ09666 5890 aaKnown RBP7.6□□□□□ -1.19
NPHP3-202ENST00000383282 MUC5BQ9HC84 5762 aaPredicted RBP7.57□□□□□ -1.2
NPHP3-202ENST00000383282 MUC5ACP98088 5654 aa7.57□□□□□ -1.2
NPHP3-202ENST00000383282 SVIPQ8NHG7 77 aa7.52□□□□□ -1.21
NPHP3-202ENST00000383282 KRTAP9-9Q9BYP9 154 aa7.48□□□□□ -1.21
NPHP3-202ENST00000383282 MT3P25713 68 aa7.34□□□□□ -1.23
NPHP3-202ENST00000383282 KRTAP5-1Q6L8H4 278 aa7.21□□□□□ -1.26
NPHP3-202ENST00000383282 LCE1EQ5T753 118 aa6.81□□□□□ -1.32
NPHP3-202ENST00000383282 LUZP6Q538Z0 58 aa6.75□□□□□ -1.33
NPHP3-202ENST00000383282 LCE1BQ5T7P3 118 aa6.46□□□□□ -1.38
NPHP3-202ENST00000383282 KRTAP4-2Q9BYR5 136 aa6.43□□□□□ -1.38
NPHP3-202ENST00000383282 LCE1CQ5T751 118 aa6.31□□□□□ -1.4
NPHP3-202ENST00000383282 LCE3DQ9BYE3 92 aa6.03□□□□□ -1.44
NPHP3-202ENST00000383282 KRTAP4-12Q9BQ66 201 aa5.97□□□□□ -1.45
NPHP3-202ENST00000383282 NDUFAF8A1L188 74 aa5.91□□□□□ -1.46
NPHP3-202ENST00000383282 LCE3EQ5T5B0 92 aa5.77□□□□□ -1.49
NPHP3-202ENST00000383282 KRTAP5-11Q6L8G4 156 aa5.75□□□□□ -1.49
NPHP3-202ENST00000383282 LCE1FQ5T754 118 aa5.7□□□□□ -1.5
NPHP3-202ENST00000383282 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.69□□□□□ -1.5
NPHP3-202ENST00000383282 PHGR1C9JFL3 82 aa5.31□□□□□ -1.56
NPHP3-202ENST00000383282 KRTAP21-2Q3LI59 83 aa5.21□□□□□ -1.58
NPHP3-202ENST00000383282 A0A0A0MQY5 61 aa5.02□□□□□ -1.61
NPHP3-202ENST00000383282 INE1O15225 51 aa4.85□□□□□ -1.63
NPHP3-202ENST00000383282 KRTAP4-4Q9BYR3 166 aa4.84□□□□□ -1.63
NPHP3-202ENST00000383282 MUC19Q7Z5P9 8384 aa4.68□□□□□ -1.66
NPHP3-202ENST00000383282 PRM1P04553 51 aa4.65□□□□□ -1.67
NPHP3-202ENST00000383282 H3BS24 57 aa4.11□□□□□ -1.75
NPHP3-202ENST00000383282 KRTAP21-1Q3LI58 79 aa4.05□□□□□ -1.76
NPHP3-202ENST00000383282 MUC16Q8WXI7 14507 aa3.32□□□□□ -1.88
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms