RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 TNP1P09430 55 aa7.46□□□□□ -1.21
GTF3A-201ENST00000381140 KRTAP25-1Q3LHN0 102 aa7.46□□□□□ -1.21
GTF3A-201ENST00000381140 MDN1Q9NU22 5596 aa7.46□□□□□ -1.22
GTF3A-201ENST00000381140 KRTAP4-2Q9BYR5 136 aa7.4□□□□□ -1.22
GTF3A-201ENST00000381140 LCE1AQ5T7P2 110 aa7.39□□□□□ -1.23
GTF3A-201ENST00000381140 KTN1-AS1Q86SY8 53 aa7.38□□□□□ -1.23
GTF3A-201ENST00000381140 KRTAP19-4Q3LI73 84 aa7.36□□□□□ -1.23
GTF3A-201ENST00000381140 KRTAP20-1Q3LI63 56 aa7.33□□□□□ -1.24
GTF3A-201ENST00000381140 KRTAP4-11Q9BYQ6 195 aa7.29□□□□□ -1.24
GTF3A-201ENST00000381140 KRTAP23-1A1A580 65 aa7.25□□□□□ -1.25
GTF3A-201ENST00000381140 SPRR2DP22532 72 aa7.24□□□□□ -1.25
GTF3A-201ENST00000381140 KRTAP19-7Q3SYF9 63 aa7.24□□□□□ -1.25
GTF3A-201ENST00000381140 PRAC1Q96KF2 57 aa7.23□□□□□ -1.25
GTF3A-201ENST00000381140 KRTAP2-3P0C7H8 128 aa7.19□□□□□ -1.26
GTF3A-201ENST00000381140 KRTAP19-5Q3LI72 72 aa7.19□□□□□ -1.26
GTF3A-201ENST00000381140 PP632Q6XCG6 107 aa7.19□□□□□ -1.26
GTF3A-201ENST00000381140 KRTAP2-4Q9BYR9 128 aa7.19□□□□□ -1.26
GTF3A-201ENST00000381140 MT1EP04732 61 aa7.18□□□□□ -1.26
GTF3A-201ENST00000381140 LCE3AQ5TA76 89 aa7.18□□□□□ -1.26
GTF3A-201ENST00000381140 H3BS24 57 aa7.15□□□□□ -1.26
GTF3A-201ENST00000381140 LCE5AQ5TCM9 118 aa7.15□□□□□ -1.26
GTF3A-201ENST00000381140 KRTAP19-3Q7Z4W3 81 aa7.06□□□□□ -1.28
GTF3A-201ENST00000381140 KRTAP2-2Q9BYT5 123 aa6.97□□□□□ -1.29
GTF3A-201ENST00000381140 KRTAP2-1Q9BYU5 128 aa6.97□□□□□ -1.29
GTF3A-201ENST00000381140 MT1GP13640 62 aa6.92□□□□□ -1.3
GTF3A-201ENST00000381140 SVIPQ8NHG7 77 aa6.92□□□□□ -1.3
GTF3A-201ENST00000381140 MT1LQ93083 61 aa6.92□□□□□ -1.3
GTF3A-201ENST00000381140 KRTAP12-3P60328 96 aa6.9□□□□□ -1.31
GTF3A-201ENST00000381140 MT1MQ8N339 61 aa6.82□□□□□ -1.32
GTF3A-201ENST00000381140 DSTQ03001 7570 aaKnown RBP6.76□□□□□ -1.33
GTF3A-201ENST00000381140 KRTAP15-1Q3LI76 137 aa6.72□□□□□ -1.33
GTF3A-201ENST00000381140 KRTAP4-3Q9BYR4 195 aa6.69□□□□□ -1.34
GTF3A-201ENST00000381140 KRTAP5-3Q6L8H2 238 aa6.61□□□□□ -1.35
GTF3A-201ENST00000381140 LCE3CQ5T5A8 94 aa6.43□□□□□ -1.38
GTF3A-201ENST00000381140 MT4P47944 62 aa6.33□□□□□ -1.4
GTF3A-201ENST00000381140 SPRR5A0A1B0GTR4 108 aa6.31□□□□□ -1.4
GTF3A-201ENST00000381140 KRTAP5-4Q6L8H1 288 aa6.28□□□□□ -1.4
GTF3A-201ENST00000381140 KRTAP5-5Q701N2 237 aaPredicted RBP6.18□□□□□ -1.42
GTF3A-201ENST00000381140 HMCN1Q96RW7 5635 aa6.15□□□□□ -1.42
GTF3A-201ENST00000381140 KRTAP9-6A8MVA2 160 aa6.06□□□□□ -1.44
GTF3A-201ENST00000381140 GPR98Q8WXG9 6306 aa6.06□□□□□ -1.44
GTF3A-201ENST00000381140 KRTAP12-4P60329 112 aa5.99□□□□□ -1.45
GTF3A-201ENST00000381140 LUZP6Q538Z0 58 aa5.95□□□□□ -1.46
GTF3A-201ENST00000381140 KRTAP20-2Q3LI61 65 aa5.94□□□□□ -1.46
GTF3A-201ENST00000381140 SYNE1Q8NF91 8797 aaKnown RBP5.92□□□□□ -1.46
GTF3A-201ENST00000381140 AHNAK2Q8IVF2 5795 aa5.9□□□□□ -1.47
GTF3A-201ENST00000381140 MT1AP04731 61 aa5.89□□□□□ -1.47
GTF3A-201ENST00000381140 KRTAP6-1Q3LI64 71 aa5.85□□□□□ -1.47
GTF3A-201ENST00000381140 KRTAP5-10Q6L8G5 202 aa5.67□□□□□ -1.5
GTF3A-201ENST00000381140 NDUFAF8A1L188 74 aa5.66□□□□□ -1.5
GTF3A-201ENST00000381140 KRTAP5-2Q701N4 177 aa5.55□□□□□ -1.52
GTF3A-201ENST00000381140 KRTAP6-2Q3LI66 62 aa5.55□□□□□ -1.52
GTF3A-201ENST00000381140 KRTAP5-7Q6L8G8 165 aa5.41□□□□□ -1.54
GTF3A-201ENST00000381140 MT3P25713 68 aa5.37□□□□□ -1.55
GTF3A-201ENST00000381140 OBSCNQ5VST9 7968 aa5.15□□□□□ -1.59
GTF3A-201ENST00000381140 KRTAP5-8O75690 187 aa5.15□□□□□ -1.59
GTF3A-201ENST00000381140 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.97□□□□□ -1.61
GTF3A-201ENST00000381140 A0A0A0MQY5 61 aa4.94□□□□□ -1.62
GTF3A-201ENST00000381140 KRTAP5-1Q6L8H4 278 aa4.92□□□□□ -1.62
GTF3A-201ENST00000381140 KRTAP5-11Q6L8G4 156 aa4.91□□□□□ -1.62
GTF3A-201ENST00000381140 LCE1EQ5T753 118 aa4.81□□□□□ -1.64
GTF3A-201ENST00000381140 LCE3DQ9BYE3 92 aa4.79□□□□□ -1.64
GTF3A-201ENST00000381140 MUC5ACP98088 5654 aa4.79□□□□□ -1.64
GTF3A-201ENST00000381140 AHNAKQ09666 5890 aaKnown RBP4.76□□□□□ -1.65
GTF3A-201ENST00000381140 INE1O15225 51 aa4.72□□□□□ -1.65
GTF3A-201ENST00000381140 MUC5BQ9HC84 5762 aaPredicted RBP4.71□□□□□ -1.65
GTF3A-201ENST00000381140 LCE3EQ5T5B0 92 aa4.65□□□□□ -1.66
GTF3A-201ENST00000381140 LCE1BQ5T7P3 118 aa4.62□□□□□ -1.67
GTF3A-201ENST00000381140 LCE1CQ5T751 118 aa4.47□□□□□ -1.69
GTF3A-201ENST00000381140 KRTAP4-4Q9BYR3 166 aa4.13□□□□□ -1.75
GTF3A-201ENST00000381140 PRM1P04553 51 aa3.96□□□□□ -1.78
GTF3A-201ENST00000381140 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
GTF3A-201ENST00000381140 KRTAP21-2Q3LI59 83 aa3.82□□□□□ -1.8
GTF3A-201ENST00000381140 PHGR1C9JFL3 82 aa3.48□□□□□ -1.85
GTF3A-201ENST00000381140 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
GTF3A-201ENST00000381140 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
GTF3A-201ENST00000381140 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 134.4 ms