RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 KRTAP10-7P60409 375 aaPredicted RBP3.73□□□□□ -1.81
HMGN1-202ENST00000380747 CAMK2N1Q7Z7J9 78 aa3.73□□□□□ -1.81
HMGN1-202ENST00000380747 TMEM258P61165 79 aa3.71□□□□□ -1.82
HMGN1-202ENST00000380747 KRTAP8-1Q8IUC2 63 aa3.7□□□□□ -1.82
HMGN1-202ENST00000380747 SPINT4Q6UDR6 99 aa3.69□□□□□ -1.82
HMGN1-202ENST00000380747 PRR15LQ9BU68 103 aa3.68□□□□□ -1.82
HMGN1-202ENST00000380747 SPRR2DP22532 72 aa3.67□□□□□ -1.82
HMGN1-202ENST00000380747 SMIM26A0A096LP01 95 aa3.66□□□□□ -1.82
HMGN1-202ENST00000380747 LCE3CQ5T5A8 94 aa3.66□□□□□ -1.82
HMGN1-202ENST00000380747 KRTAP12-1P59990 96 aa3.64□□□□□ -1.83
HMGN1-202ENST00000380747 LINC01558Q9Y6Z2 57 aa3.64□□□□□ -1.83
HMGN1-202ENST00000380747 A8MU10 97 aa3.63□□□□□ -1.83
HMGN1-202ENST00000380747 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
HMGN1-202ENST00000380747 UQCR11O14957 56 aa3.54□□□□□ -1.84
HMGN1-202ENST00000380747 DSTQ03001 7570 aaKnown RBP3.54□□□□□ -1.84
HMGN1-202ENST00000380747 V9GYY9 64 aa3.5□□□□□ -1.85
HMGN1-202ENST00000380747 PSPHP1O15172 72 aa3.48□□□□□ -1.85
HMGN1-202ENST00000380747 MIR22HGQ0VDD5 57 aa3.48□□□□□ -1.85
HMGN1-202ENST00000380747 C10orf95Q9H7T3 257 aa3.47□□□□□ -1.85
HMGN1-202ENST00000380747 Q1T7F1 81 aa3.46□□□□□ -1.86
HMGN1-202ENST00000380747 TNP1P09430 55 aa3.45□□□□□ -1.86
HMGN1-202ENST00000380747 KRTAP19-7Q3SYF9 63 aa3.45□□□□□ -1.86
HMGN1-202ENST00000380747 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
HMGN1-202ENST00000380747 MT1EP04732 61 aa3.42□□□□□ -1.86
HMGN1-202ENST00000380747 KRTAP19-5Q3LI72 72 aa3.41□□□□□ -1.86
HMGN1-202ENST00000380747 K7ERS5 55 aa3.4□□□□□ -1.87
HMGN1-202ENST00000380747 LCE3AQ5TA76 89 aa3.4□□□□□ -1.87
HMGN1-202ENST00000380747 AHNAK2Q8IVF2 5795 aa3.39□□□□□ -1.87
HMGN1-202ENST00000380747 A6NED7 52 aa3.38□□□□□ -1.87
HMGN1-202ENST00000380747 RPS28P62857 69 aaKnown RBP3.37□□□□□ -1.87
HMGN1-202ENST00000380747 KRTAP19-3Q7Z4W3 81 aa3.37□□□□□ -1.87
HMGN1-202ENST00000380747 LCE3EQ5T5B0 92 aa3.35□□□□□ -1.87
HMGN1-202ENST00000380747 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.87
HMGN1-202ENST00000380747 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
HMGN1-202ENST00000380747 KRTAP5-10Q6L8G5 202 aa3.31□□□□□ -1.88
HMGN1-202ENST00000380747 MT1GP13640 62 aa3.3□□□□□ -1.88
HMGN1-202ENST00000380747 KRTAP25-1Q3LHN0 102 aa3.3□□□□□ -1.88
HMGN1-202ENST00000380747 PP632Q6XCG6 107 aa3.29□□□□□ -1.88
HMGN1-202ENST00000380747 MT1LQ93083 61 aa3.29□□□□□ -1.88
HMGN1-202ENST00000380747 KRTAP12-3P60328 96 aa3.26□□□□□ -1.89
HMGN1-202ENST00000380747 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
HMGN1-202ENST00000380747 MT1MQ8N339 61 aa3.25□□□□□ -1.89
HMGN1-202ENST00000380747 CDC42SE1Q9NRR8 79 aa3.23□□□□□ -1.89
HMGN1-202ENST00000380747 SPRR5A0A1B0GTR4 108 aa3.22□□□□□ -1.89
HMGN1-202ENST00000380747 MT4P47944 62 aa3.22□□□□□ -1.89
HMGN1-202ENST00000380747 KRTAP5-7Q6L8G8 165 aa3.22□□□□□ -1.89
HMGN1-202ENST00000380747 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
HMGN1-202ENST00000380747 KRTAP4-3Q9BYR4 195 aa3.19□□□□□ -1.9
HMGN1-202ENST00000380747 ROMO1P60602 79 aa3.18□□□□□ -1.9
HMGN1-202ENST00000380747 BRK1Q8WUW1 75 aa3.02□□□□□ -1.93
HMGN1-202ENST00000380747 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
HMGN1-202ENST00000380747 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
HMGN1-202ENST00000380747 AHNAKQ09666 5890 aaKnown RBP2.93□□□□□ -1.94
HMGN1-202ENST00000380747 MUC5BQ9HC84 5762 aaPredicted RBP2.89□□□□□ -1.95
HMGN1-202ENST00000380747 KRTAP12-4P60329 112 aa2.88□□□□□ -1.95
HMGN1-202ENST00000380747 SYNE1Q8NF91 8797 aaKnown RBP2.87□□□□□ -1.95
HMGN1-202ENST00000380747 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
HMGN1-202ENST00000380747 PMAIP1Q13794 54 aa2.83□□□□□ -1.96
HMGN1-202ENST00000380747 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
HMGN1-202ENST00000380747 MT1AP04731 61 aa2.8□□□□□ -1.96
HMGN1-202ENST00000380747 OBSCNQ5VST9 7968 aa2.79□□□□□ -1.96
HMGN1-202ENST00000380747 KRTAP6-1Q3LI64 71 aa2.78□□□□□ -1.96
HMGN1-202ENST00000380747 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
HMGN1-202ENST00000380747 KRTAP5-8O75690 187 aa2.71□□□□□ -1.98
HMGN1-202ENST00000380747 PRO0628Q9UI54 55 aa2.7□□□□□ -1.98
HMGN1-202ENST00000380747 LUZP6Q538Z0 58 aa2.68□□□□□ -1.98
HMGN1-202ENST00000380747 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
HMGN1-202ENST00000380747 KTN1-AS1Q86SY8 53 aa2.56□□□□□ -2
HMGN1-202ENST00000380747 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
HMGN1-202ENST00000380747 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
HMGN1-202ENST00000380747 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
HMGN1-202ENST00000380747 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
HMGN1-202ENST00000380747 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
HMGN1-202ENST00000380747 PRM1P04553 51 aa1.64□□□□□ -2.15
HMGN1-202ENST00000380747 INE1O15225 51 aa1.55□□□□□ -2.16
HMGN1-202ENST00000380747 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
HMGN1-202ENST00000380747 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms