RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 MDN1Q9NU22 5596 aa4.95□□□□□ -1.62
SMN1-202ENST00000380707 KRTAP8-1Q8IUC2 63 aa4.93□□□□□ -1.62
SMN1-202ENST00000380707 CDC42SE1Q9NRR8 79 aa4.93□□□□□ -1.62
SMN1-202ENST00000380707 KRTAP5-11Q6L8G4 156 aa4.92□□□□□ -1.62
SMN1-202ENST00000380707 TNP1P09430 55 aa4.87□□□□□ -1.63
SMN1-202ENST00000380707 SPRR2FQ96RM1 72 aa4.86□□□□□ -1.63
SMN1-202ENST00000380707 NEBP20929 6669 aa4.8□□□□□ -1.64
SMN1-202ENST00000380707 KRTAP5-4Q6L8H1 288 aa4.77□□□□□ -1.65
SMN1-202ENST00000380707 LCE3AQ5TA76 89 aa4.77□□□□□ -1.65
SMN1-202ENST00000380707 KRTAP25-1Q3LHN0 102 aa4.76□□□□□ -1.65
SMN1-202ENST00000380707 BRK1Q8WUW1 75 aa4.75□□□□□ -1.65
SMN1-202ENST00000380707 KRTAP19-7Q3SYF9 63 aa4.74□□□□□ -1.65
SMN1-202ENST00000380707 ROMO1P60602 79 aa4.72□□□□□ -1.65
SMN1-202ENST00000380707 KRTAP19-5Q3LI72 72 aa4.72□□□□□ -1.65
SMN1-202ENST00000380707 KRTAP5-1Q6L8H4 278 aa4.71□□□□□ -1.66
SMN1-202ENST00000380707 SPRR2EP22531 72 aa4.69□□□□□ -1.66
SMN1-202ENST00000380707 SPRR2BP35325 72 aa4.69□□□□□ -1.66
SMN1-202ENST00000380707 SPRR2AP35326 72 aa4.69□□□□□ -1.66
SMN1-202ENST00000380707 LCE1AQ5T7P2 110 aa4.69□□□□□ -1.66
SMN1-202ENST00000380707 MT1EP04732 61 aa4.68□□□□□ -1.66
SMN1-202ENST00000380707 KRTAP4-4Q9BYR3 166 aa4.63□□□□□ -1.67
SMN1-202ENST00000380707 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
SMN1-202ENST00000380707 KRTAP19-3Q7Z4W3 81 aa4.56□□□□□ -1.68
SMN1-202ENST00000380707 SPRR2DP22532 72 aa4.53□□□□□ -1.68
SMN1-202ENST00000380707 MT1LQ93083 61 aa4.52□□□□□ -1.69
SMN1-202ENST00000380707 MT1GP13640 62 aa4.49□□□□□ -1.69
SMN1-202ENST00000380707 PP632Q6XCG6 107 aa4.49□□□□□ -1.69
SMN1-202ENST00000380707 PMAIP1Q13794 54 aa4.48□□□□□ -1.69
SMN1-202ENST00000380707 KRTAP20-1Q3LI63 56 aa4.46□□□□□ -1.69
SMN1-202ENST00000380707 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
SMN1-202ENST00000380707 KRTAP2-3P0C7H8 128 aa4.44□□□□□ -1.7
SMN1-202ENST00000380707 KRTAP2-4Q9BYR9 128 aa4.44□□□□□ -1.7
SMN1-202ENST00000380707 PRO0628Q9UI54 55 aa4.43□□□□□ -1.7
SMN1-202ENST00000380707 MT1MQ8N339 61 aa4.42□□□□□ -1.7
SMN1-202ENST00000380707 KRTAP4-3Q9BYR4 195 aa4.34□□□□□ -1.71
SMN1-202ENST00000380707 KRTAP2-2Q9BYT5 123 aa4.32□□□□□ -1.72
SMN1-202ENST00000380707 KRTAP2-1Q9BYU5 128 aa4.32□□□□□ -1.72
SMN1-202ENST00000380707 LCE3CQ5T5A8 94 aa4.26□□□□□ -1.73
SMN1-202ENST00000380707 PRAC1Q96KF2 57 aa4.26□□□□□ -1.73
SMN1-202ENST00000380707 KRTAP5-2Q701N4 177 aa4.17□□□□□ -1.74
SMN1-202ENST00000380707 KTN1-AS1Q86SY8 53 aa4.16□□□□□ -1.74
SMN1-202ENST00000380707 LCE1EQ5T753 118 aa4.11□□□□□ -1.75
SMN1-202ENST00000380707 KRTAP9-6A8MVA2 160 aa4.04□□□□□ -1.76
SMN1-202ENST00000380707 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
SMN1-202ENST00000380707 HMCN1Q96RW7 5635 aa4.01□□□□□ -1.77
SMN1-202ENST00000380707 MT3P25713 68 aa3.98□□□□□ -1.77
SMN1-202ENST00000380707 MT4P47944 62 aa3.95□□□□□ -1.78
SMN1-202ENST00000380707 SYNE1Q8NF91 8797 aaKnown RBP3.91□□□□□ -1.78
SMN1-202ENST00000380707 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
SMN1-202ENST00000380707 SPRR5A0A1B0GTR4 108 aa3.85□□□□□ -1.79
SMN1-202ENST00000380707 GPR98Q8WXG9 6306 aa3.84□□□□□ -1.79
SMN1-202ENST00000380707 MT1AP04731 61 aa3.84□□□□□ -1.8
SMN1-202ENST00000380707 KRTAP12-4P60329 112 aa3.82□□□□□ -1.8
SMN1-202ENST00000380707 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
SMN1-202ENST00000380707 LCE1FQ5T754 118 aa3.8□□□□□ -1.8
SMN1-202ENST00000380707 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
SMN1-202ENST00000380707 KRTAP20-2Q3LI61 65 aa3.78□□□□□ -1.8
SMN1-202ENST00000380707 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
SMN1-202ENST00000380707 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
SMN1-202ENST00000380707 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.84
SMN1-202ENST00000380707 KRTAP5-10Q6L8G5 202 aa3.5□□□□□ -1.85
SMN1-202ENST00000380707 LUZP6Q538Z0 58 aa3.49□□□□□ -1.85
SMN1-202ENST00000380707 KRTAP5-7Q6L8G8 165 aa3.3□□□□□ -1.88
SMN1-202ENST00000380707 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
SMN1-202ENST00000380707 MUC5ACP98088 5654 aa3.17□□□□□ -1.9
SMN1-202ENST00000380707 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
SMN1-202ENST00000380707 MUC5BQ9HC84 5762 aaPredicted RBP3.05□□□□□ -1.92
SMN1-202ENST00000380707 AHNAKQ09666 5890 aaKnown RBP2.97□□□□□ -1.93
SMN1-202ENST00000380707 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
SMN1-202ENST00000380707 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
SMN1-202ENST00000380707 INE1O15225 51 aa2.57□□□□□ -2
SMN1-202ENST00000380707 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
SMN1-202ENST00000380707 PRM1P04553 51 aa2.44□□□□□ -2.02
SMN1-202ENST00000380707 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
SMN1-202ENST00000380707 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
SMN1-202ENST00000380707 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
SMN1-202ENST00000380707 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 124.9 ms