RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 KRTAP4-7Q9BYR0 210 aa3.17□□□□□ -1.9
PTPRA-204ENST00000380393 KRTAP4-8A0A0G2JLE6 195 aa3.15□□□□□ -1.9
PTPRA-204ENST00000380393 KRTAP4-8Q9BYQ9 185 aa3.15□□□□□ -1.9
PTPRA-204ENST00000380393 LOC100996750A0A140TA64 210 aa3.13□□□□□ -1.91
PTPRA-204ENST00000380393 KRTAP19-6Q3LI70 58 aa3.13□□□□□ -1.91
PTPRA-204ENST00000380393 KRTAP4-6Q9BYQ5 205 aa3.13□□□□□ -1.91
PTPRA-204ENST00000380393 LCE1AQ5T7P2 110 aa3.12□□□□□ -1.91
PTPRA-204ENST00000380393 KRTAP6-3Q3LI67 103 aa3.12□□□□□ -1.91
PTPRA-204ENST00000380393 CRCT1Q9UGL9 99 aa3.11□□□□□ -1.91
PTPRA-204ENST00000380393 MUC12Q9UKN1 5478 aa3.11□□□□□ -1.91
PTPRA-204ENST00000380393 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
PTPRA-204ENST00000380393 KRTAP9-6A0A140TA67 174 aa3.05□□□□□ -1.92
PTPRA-204ENST00000380393 KRTAP9-7A8MTY7 169 aa3.04□□□□□ -1.92
PTPRA-204ENST00000380393 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
PTPRA-204ENST00000380393 KRTAP9-4Q9BYQ2 154 aa3.01□□□□□ -1.93
PTPRA-204ENST00000380393 LCE1EQ5T753 118 aa3□□□□□ -1.93
PTPRA-204ENST00000380393 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
PTPRA-204ENST00000380393 DSTQ03001 7570 aaKnown RBP2.96□□□□□ -1.94
PTPRA-204ENST00000380393 PRM1P04553 51 aa2.95□□□□□ -1.94
PTPRA-204ENST00000380393 SYNE1Q8NF91 8797 aaKnown RBP2.95□□□□□ -1.94
PTPRA-204ENST00000380393 KRTAP19-7Q3SYF9 63 aa2.94□□□□□ -1.94
PTPRA-204ENST00000380393 KRTAP19-4Q3LI73 84 aa2.9□□□□□ -1.94
PTPRA-204ENST00000380393 SPRR2FQ96RM1 72 aa2.89□□□□□ -1.95
PTPRA-204ENST00000380393 MT1LQ93083 61 aa2.89□□□□□ -1.95
PTPRA-204ENST00000380393 KRTAP4-3Q9BYR4 195 aa2.88□□□□□ -1.95
PTPRA-204ENST00000380393 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.88□□□□□ -1.95
PTPRA-204ENST00000380393 MT1GP13640 62 aa2.87□□□□□ -1.95
PTPRA-204ENST00000380393 LCE1DQ5T752 114 aa2.86□□□□□ -1.95
PTPRA-204ENST00000380393 MT1EP04732 61 aa2.85□□□□□ -1.95
PTPRA-204ENST00000380393 LCE5AQ5TCM9 118 aa2.85□□□□□ -1.95
PTPRA-204ENST00000380393 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
PTPRA-204ENST00000380393 KRTAP4-9Q9BYQ8 210 aa2.8□□□□□ -1.96
PTPRA-204ENST00000380393 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.97
PTPRA-204ENST00000380393 LCE3BQ5TA77 95 aa2.77□□□□□ -1.97
PTPRA-204ENST00000380393 KRTAP5-9P26371 169 aa2.74□□□□□ -1.97
PTPRA-204ENST00000380393 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
PTPRA-204ENST00000380393 KRTAP19-3Q7Z4W3 81 aa2.73□□□□□ -1.97
PTPRA-204ENST00000380393 SPRR2EP22531 72 aa2.73□□□□□ -1.97
PTPRA-204ENST00000380393 SPRR2BP35325 72 aa2.73□□□□□ -1.97
PTPRA-204ENST00000380393 SPRR2AP35326 72 aa2.73□□□□□ -1.97
PTPRA-204ENST00000380393 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
PTPRA-204ENST00000380393 MT1MQ8N339 61 aa2.69□□□□□ -1.98
PTPRA-204ENST00000380393 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
PTPRA-204ENST00000380393 NEBP20929 6669 aa2.67□□□□□ -1.98
PTPRA-204ENST00000380393 MT1AP04731 61 aa2.64□□□□□ -1.99
PTPRA-204ENST00000380393 KRTAP6-2Q3LI66 62 aa2.62□□□□□ -1.99
PTPRA-204ENST00000380393 SPRR2DP22532 72 aa2.61□□□□□ -1.99
PTPRA-204ENST00000380393 KRTAP6-1Q3LI64 71 aa2.51□□□□□ -2.01
PTPRA-204ENST00000380393 KRTAP4-2Q9BYR5 136 aa2.43□□□□□ -2.02
PTPRA-204ENST00000380393 KRTAP20-1Q3LI63 56 aa2.38□□□□□ -2.03
PTPRA-204ENST00000380393 KRTAP4-11Q9BYQ6 195 aa2.38□□□□□ -2.03
PTPRA-204ENST00000380393 MT4P47944 62 aa2.37□□□□□ -2.03
PTPRA-204ENST00000380393 HMCN1Q96RW7 5635 aa2.35□□□□□ -2.03
PTPRA-204ENST00000380393 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
PTPRA-204ENST00000380393 KRTAP5-4Q6L8H1 288 aa2.27□□□□□ -2.05
PTPRA-204ENST00000380393 MT3P25713 68 aa2.22□□□□□ -2.05
PTPRA-204ENST00000380393 KRTAP20-2Q3LI61 65 aa2.18□□□□□ -2.06
PTPRA-204ENST00000380393 KRTAP5-3Q6L8H2 238 aa2.09□□□□□ -2.07
PTPRA-204ENST00000380393 KRTAP5-2Q701N4 177 aa2.04□□□□□ -2.08
PTPRA-204ENST00000380393 AHNAK2Q8IVF2 5795 aa2.03□□□□□ -2.08
PTPRA-204ENST00000380393 LCE1CQ5T751 118 aa1.99□□□□□ -2.09
PTPRA-204ENST00000380393 LCE1BQ5T7P3 118 aa1.99□□□□□ -2.09
PTPRA-204ENST00000380393 MUC5ACP98088 5654 aa1.93□□□□□ -2.1
PTPRA-204ENST00000380393 GPR98Q8WXG9 6306 aa1.91□□□□□ -2.1
PTPRA-204ENST00000380393 KRTAP5-10Q6L8G5 202 aa1.87□□□□□ -2.11
PTPRA-204ENST00000380393 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
PTPRA-204ENST00000380393 KRTAP5-8O75690 187 aa1.83□□□□□ -2.12
PTPRA-204ENST00000380393 KRTAP5-1Q6L8H4 278 aa1.83□□□□□ -2.12
PTPRA-204ENST00000380393 MUC5BQ9HC84 5762 aaPredicted RBP1.82□□□□□ -2.12
PTPRA-204ENST00000380393 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.71□□□□□ -2.14
PTPRA-204ENST00000380393 KRTAP4-4Q9BYR3 166 aa1.66□□□□□ -2.14
PTPRA-204ENST00000380393 KRTAP5-7Q6L8G8 165 aa1.65□□□□□ -2.14
PTPRA-204ENST00000380393 KRTAP5-11Q6L8G4 156 aa1.62□□□□□ -2.15
PTPRA-204ENST00000380393 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
PTPRA-204ENST00000380393 AHNAKQ09666 5890 aaKnown RBP1.53□□□□□ -2.16
PTPRA-204ENST00000380393 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
PTPRA-204ENST00000380393 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 12.5 ms