RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 KRTAP20-1Q3LI63 56 aa4.31□□□□□ -1.72
POLR2J3-201ENST00000379340 NDUFAF8A1L188 74 aa4.27□□□□□ -1.73
POLR2J3-201ENST00000379340 KRTAP10-5P60370 271 aa4.26□□□□□ -1.73
POLR2J3-201ENST00000379340 MT1XP80297 61 aa4.26□□□□□ -1.73
POLR2J3-201ENST00000379340 MUC12Q9UKN1 5478 aa4.24□□□□□ -1.73
POLR2J3-201ENST00000379340 PRO2289Q9P1D8 64 aa4.23□□□□□ -1.73
POLR2J3-201ENST00000379340 LCE4AQ5TA78 99 aa4.22□□□□□ -1.73
POLR2J3-201ENST00000379340 KRTAP4-11Q9BYQ6 195 aa4.2□□□□□ -1.74
POLR2J3-201ENST00000379340 LCE3AQ5TA76 89 aa4.19□□□□□ -1.74
POLR2J3-201ENST00000379340 KRTAP8-1Q8IUC2 63 aa4.15□□□□□ -1.74
POLR2J3-201ENST00000379340 KRTAP10-12P60413 245 aa4.14□□□□□ -1.75
POLR2J3-201ENST00000379340 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
POLR2J3-201ENST00000379340 KMT2DO14686 5537 aa4.09□□□□□ -1.75
POLR2J3-201ENST00000379340 MDN1Q9NU22 5596 aa4.08□□□□□ -1.76
POLR2J3-201ENST00000379340 SPRR5A0A1B0GTR4 108 aa4.08□□□□□ -1.76
POLR2J3-201ENST00000379340 KRTAP10-7P60409 375 aaPredicted RBP4.08□□□□□ -1.76
POLR2J3-201ENST00000379340 KRTAP2-3P0C7H8 128 aa4.07□□□□□ -1.76
POLR2J3-201ENST00000379340 KRTAP5-9P26371 169 aa4.07□□□□□ -1.76
POLR2J3-201ENST00000379340 KRTAP2-4Q9BYR9 128 aa4.07□□□□□ -1.76
POLR2J3-201ENST00000379340 KRTAP12-3P60328 96 aa4.03□□□□□ -1.76
POLR2J3-201ENST00000379340 GPR98Q8WXG9 6306 aa3.93□□□□□ -1.78
POLR2J3-201ENST00000379340 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
POLR2J3-201ENST00000379340 KRTAP2-1Q9BYU5 128 aa3.91□□□□□ -1.78
POLR2J3-201ENST00000379340 SPRR2EP22531 72 aa3.9□□□□□ -1.78
POLR2J3-201ENST00000379340 SPRR2BP35325 72 aa3.9□□□□□ -1.78
POLR2J3-201ENST00000379340 SPRR2AP35326 72 aa3.9□□□□□ -1.78
POLR2J3-201ENST00000379340 KRTAP19-5Q3LI72 72 aa3.9□□□□□ -1.78
POLR2J3-201ENST00000379340 LCE5AQ5TCM9 118 aa3.86□□□□□ -1.79
POLR2J3-201ENST00000379340 SPRR2FQ96RM1 72 aa3.86□□□□□ -1.79
POLR2J3-201ENST00000379340 LCE1AQ5T7P2 110 aa3.82□□□□□ -1.8
POLR2J3-201ENST00000379340 KRTAP19-7Q3SYF9 63 aa3.79□□□□□ -1.8
POLR2J3-201ENST00000379340 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
POLR2J3-201ENST00000379340 SPRR2DP22532 72 aa3.76□□□□□ -1.81
POLR2J3-201ENST00000379340 MT1EP04732 61 aa3.72□□□□□ -1.81
POLR2J3-201ENST00000379340 MT1LQ93083 61 aa3.68□□□□□ -1.82
POLR2J3-201ENST00000379340 DSTQ03001 7570 aaKnown RBP3.61□□□□□ -1.83
POLR2J3-201ENST00000379340 KRTAP9-6A8MVA2 160 aa3.55□□□□□ -1.84
POLR2J3-201ENST00000379340 MT1GP13640 62 aa3.54□□□□□ -1.84
POLR2J3-201ENST00000379340 KRTAP19-3Q7Z4W3 81 aa3.54□□□□□ -1.84
POLR2J3-201ENST00000379340 INE1O15225 51 aa3.53□□□□□ -1.84
POLR2J3-201ENST00000379340 MT1MQ8N339 61 aa3.49□□□□□ -1.85
POLR2J3-201ENST00000379340 HMCN1Q96RW7 5635 aa3.47□□□□□ -1.85
POLR2J3-201ENST00000379340 AHNAK2Q8IVF2 5795 aa3.43□□□□□ -1.86
POLR2J3-201ENST00000379340 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
POLR2J3-201ENST00000379340 KRTAP4-3Q9BYR4 195 aa3.38□□□□□ -1.87
POLR2J3-201ENST00000379340 MT4P47944 62 aa3.37□□□□□ -1.87
POLR2J3-201ENST00000379340 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
POLR2J3-201ENST00000379340 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
POLR2J3-201ENST00000379340 KRTAP5-4Q6L8H1 288 aa3.19□□□□□ -1.9
POLR2J3-201ENST00000379340 MT1AP04731 61 aa3.15□□□□□ -1.91
POLR2J3-201ENST00000379340 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
POLR2J3-201ENST00000379340 KRTAP6-1Q3LI64 71 aa3.08□□□□□ -1.92
POLR2J3-201ENST00000379340 MT3P25713 68 aa3.05□□□□□ -1.92
POLR2J3-201ENST00000379340 KRTAP20-2Q3LI61 65 aa3.04□□□□□ -1.92
POLR2J3-201ENST00000379340 AHNAKQ09666 5890 aaKnown RBP3□□□□□ -1.93
POLR2J3-201ENST00000379340 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
POLR2J3-201ENST00000379340 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
POLR2J3-201ENST00000379340 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
POLR2J3-201ENST00000379340 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
POLR2J3-201ENST00000379340 MUC5BQ9HC84 5762 aaPredicted RBP2.89□□□□□ -1.95
POLR2J3-201ENST00000379340 SYNE1Q8NF91 8797 aaKnown RBP2.87□□□□□ -1.95
POLR2J3-201ENST00000379340 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
POLR2J3-201ENST00000379340 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
POLR2J3-201ENST00000379340 KRTAP6-2Q3LI66 62 aa2.8□□□□□ -1.96
POLR2J3-201ENST00000379340 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
POLR2J3-201ENST00000379340 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
POLR2J3-201ENST00000379340 KRTAP5-1Q6L8H4 278 aa2.68□□□□□ -1.98
POLR2J3-201ENST00000379340 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
POLR2J3-201ENST00000379340 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
POLR2J3-201ENST00000379340 PRM1P04553 51 aa2.57□□□□□ -2
POLR2J3-201ENST00000379340 LCE1EQ5T753 118 aa2.57□□□□□ -2
POLR2J3-201ENST00000379340 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
POLR2J3-201ENST00000379340 LCE1BQ5T7P3 118 aa2.25□□□□□ -2.05
POLR2J3-201ENST00000379340 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
POLR2J3-201ENST00000379340 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
POLR2J3-201ENST00000379340 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
POLR2J3-201ENST00000379340 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
POLR2J3-201ENST00000379340 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 111.7 ms