RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 SPRR2DP22532 72 aa6.83□□□□□ -1.32
SSU72-203ENST00000378725 KRTAP19-3Q7Z4W3 81 aa6.81□□□□□ -1.32
SSU72-203ENST00000378725 LCE5AQ5TCM9 118 aa6.79□□□□□ -1.32
SSU72-203ENST00000378725 ROMO1P60602 79 aa6.74□□□□□ -1.33
SSU72-203ENST00000378725 KRTAP23-1A1A580 65 aa6.72□□□□□ -1.33
SSU72-203ENST00000378725 MT1GP13640 62 aa6.71□□□□□ -1.34
SSU72-203ENST00000378725 KRTAP12-3P60328 96 aa6.7□□□□□ -1.34
SSU72-203ENST00000378725 MT1LQ93083 61 aa6.7□□□□□ -1.34
SSU72-203ENST00000378725 LCE3BQ5TA77 95 aa6.63□□□□□ -1.35
SSU72-203ENST00000378725 KRTAP2-2Q9BYT5 123 aa6.63□□□□□ -1.35
SSU72-203ENST00000378725 KRTAP2-1Q9BYU5 128 aa6.63□□□□□ -1.35
SSU72-203ENST00000378725 PP632Q6XCG6 107 aa6.61□□□□□ -1.35
SSU72-203ENST00000378725 MT1MQ8N339 61 aa6.57□□□□□ -1.36
SSU72-203ENST00000378725 BRK1Q8WUW1 75 aa6.56□□□□□ -1.36
SSU72-203ENST00000378725 GPR98Q8WXG9 6306 aa6.46□□□□□ -1.38
SSU72-203ENST00000378725 KRTAP19-4Q3LI73 84 aa6.41□□□□□ -1.38
SSU72-203ENST00000378725 KRTAP15-1Q3LI76 137 aa6.4□□□□□ -1.38
SSU72-203ENST00000378725 KRTAP4-3Q9BYR4 195 aa6.4□□□□□ -1.38
SSU72-203ENST00000378725 KRTAP4-7Q9BYR0 210 aa6.38□□□□□ -1.39
SSU72-203ENST00000378725 DSTQ03001 7570 aaKnown RBP6.37□□□□□ -1.39
SSU72-203ENST00000378725 LCE3CQ5T5A8 94 aa6.22□□□□□ -1.41
SSU72-203ENST00000378725 PMAIP1Q13794 54 aa6.21□□□□□ -1.42
SSU72-203ENST00000378725 KRTAP4-12Q9BQ66 201 aa6.16□□□□□ -1.42
SSU72-203ENST00000378725 H3BS24 57 aa6.15□□□□□ -1.42
SSU72-203ENST00000378725 LCE4AQ5TA78 99 aa6.1□□□□□ -1.43
SSU72-203ENST00000378725 KRTAP5-4Q6L8H1 288 aa6.08□□□□□ -1.44
SSU72-203ENST00000378725 PRO0628Q9UI54 55 aa6.08□□□□□ -1.44
SSU72-203ENST00000378725 KRTAP4-9Q9BYQ8 210 aa6.06□□□□□ -1.44
SSU72-203ENST00000378725 KRTAP5-5Q701N2 237 aaPredicted RBP6.02□□□□□ -1.45
SSU72-203ENST00000378725 KRTAP9-9Q9BYP9 154 aa5.99□□□□□ -1.45
SSU72-203ENST00000378725 KRTAP9-4Q9BYQ2 154 aa5.99□□□□□ -1.45
SSU72-203ENST00000378725 LCE1DQ5T752 114 aa5.98□□□□□ -1.45
SSU72-203ENST00000378725 MT4P47944 62 aa5.94□□□□□ -1.46
SSU72-203ENST00000378725 PRAC1Q96KF2 57 aa5.89□□□□□ -1.47
SSU72-203ENST00000378725 KRTAP9-6A8MVA2 160 aa5.87□□□□□ -1.47
SSU72-203ENST00000378725 HMCN1Q96RW7 5635 aa5.77□□□□□ -1.49
SSU72-203ENST00000378725 AHNAK2Q8IVF2 5795 aa5.77□□□□□ -1.49
SSU72-203ENST00000378725 KRTAP12-4P60329 112 aa5.74□□□□□ -1.49
SSU72-203ENST00000378725 SPRR5A0A1B0GTR4 108 aa5.72□□□□□ -1.49
SSU72-203ENST00000378725 KTN1-AS1Q86SY8 53 aa5.71□□□□□ -1.5
SSU72-203ENST00000378725 MT1AP04731 61 aa5.7□□□□□ -1.5
SSU72-203ENST00000378725 KRTAP5-10Q6L8G5 202 aa5.7□□□□□ -1.5
SSU72-203ENST00000378725 KRTAP20-2Q3LI61 65 aa5.69□□□□□ -1.5
SSU72-203ENST00000378725 KRTAP6-1Q3LI64 71 aa5.64□□□□□ -1.51
SSU72-203ENST00000378725 SYNE1Q8NF91 8797 aaKnown RBP5.61□□□□□ -1.51
SSU72-203ENST00000378725 KRTAP5-7Q6L8G8 165 aa5.54□□□□□ -1.52
SSU72-203ENST00000378725 KRTAP5-3Q6L8H2 238 aa5.53□□□□□ -1.52
SSU72-203ENST00000378725 KRTAP4-2Q9BYR5 136 aa5.42□□□□□ -1.54
SSU72-203ENST00000378725 KRTAP5-2Q701N4 177 aa5.39□□□□□ -1.55
SSU72-203ENST00000378725 SVIPQ8NHG7 77 aa5.37□□□□□ -1.55
SSU72-203ENST00000378725 KRTAP4-11Q9BYQ6 195 aa5.36□□□□□ -1.55
SSU72-203ENST00000378725 KRTAP6-2Q3LI66 62 aa5.31□□□□□ -1.56
SSU72-203ENST00000378725 MT3P25713 68 aa5.21□□□□□ -1.58
SSU72-203ENST00000378725 KRTAP5-8O75690 187 aa4.93□□□□□ -1.62
SSU72-203ENST00000378725 LUZP6Q538Z0 58 aa4.9□□□□□ -1.63
SSU72-203ENST00000378725 AHNAKQ09666 5890 aaKnown RBP4.89□□□□□ -1.63
SSU72-203ENST00000378725 MUC5ACP98088 5654 aa4.84□□□□□ -1.63
SSU72-203ENST00000378725 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
SSU72-203ENST00000378725 MUC5BQ9HC84 5762 aaPredicted RBP4.8□□□□□ -1.64
SSU72-203ENST00000378725 KRTAP5-1Q6L8H4 278 aa4.77□□□□□ -1.65
SSU72-203ENST00000378725 LCE1EQ5T753 118 aa4.72□□□□□ -1.65
SSU72-203ENST00000378725 LCE3DQ9BYE3 92 aa4.55□□□□□ -1.68
SSU72-203ENST00000378725 LCE1CQ5T751 118 aa4.37□□□□□ -1.71
SSU72-203ENST00000378725 LCE1BQ5T7P3 118 aa4.37□□□□□ -1.71
SSU72-203ENST00000378725 LCE3EQ5T5B0 92 aa4.35□□□□□ -1.71
SSU72-203ENST00000378725 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
SSU72-203ENST00000378725 NDUFAF8A1L188 74 aa4.28□□□□□ -1.72
SSU72-203ENST00000378725 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
SSU72-203ENST00000378725 KRTAP5-11Q6L8G4 156 aa3.91□□□□□ -1.78
SSU72-203ENST00000378725 KRTAP21-2Q3LI59 83 aa3.73□□□□□ -1.81
SSU72-203ENST00000378725 LCE1FQ5T754 118 aa3.73□□□□□ -1.81
SSU72-203ENST00000378725 INE1O15225 51 aa3.53□□□□□ -1.84
SSU72-203ENST00000378725 PRM1P04553 51 aa3.46□□□□□ -1.86
SSU72-203ENST00000378725 PHGR1C9JFL3 82 aa3.37□□□□□ -1.87
SSU72-203ENST00000378725 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
SSU72-203ENST00000378725 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
SSU72-203ENST00000378725 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
SSU72-203ENST00000378725 MUC16Q8WXI7 14507 aa2.18□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 100.6 ms