RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 ROMO1P60602 79 aa7.2□□□□□ -1.26
RER1-204ENST00000378518 MT1GP13640 62 aa7.17□□□□□ -1.26
RER1-204ENST00000378518 KRTAP12-3P60328 96 aa7.17□□□□□ -1.26
RER1-204ENST00000378518 LCE3BQ5TA77 95 aa7.16□□□□□ -1.26
RER1-204ENST00000378518 PP632Q6XCG6 107 aa7.16□□□□□ -1.26
RER1-204ENST00000378518 MT1LQ93083 61 aa7.14□□□□□ -1.27
RER1-204ENST00000378518 KRTAP2-2Q9BYT5 123 aa7.14□□□□□ -1.27
RER1-204ENST00000378518 KRTAP2-1Q9BYU5 128 aa7.14□□□□□ -1.27
RER1-204ENST00000378518 KRTAP23-1A1A580 65 aa7.13□□□□□ -1.27
RER1-204ENST00000378518 MT1MQ8N339 61 aa7.04□□□□□ -1.28
RER1-204ENST00000378518 BRK1Q8WUW1 75 aa7.02□□□□□ -1.29
RER1-204ENST00000378518 DSTQ03001 7570 aaKnown RBP6.88□□□□□ -1.31
RER1-204ENST00000378518 KRTAP19-4Q3LI73 84 aa6.83□□□□□ -1.32
RER1-204ENST00000378518 KRTAP15-1Q3LI76 137 aa6.83□□□□□ -1.32
RER1-204ENST00000378518 KRTAP4-3Q9BYR4 195 aa6.82□□□□□ -1.32
RER1-204ENST00000378518 KRTAP4-7Q9BYR0 210 aa6.78□□□□□ -1.32
RER1-204ENST00000378518 LCE3CQ5T5A8 94 aa6.63□□□□□ -1.35
RER1-204ENST00000378518 PMAIP1Q13794 54 aa6.61□□□□□ -1.35
RER1-204ENST00000378518 LCE4AQ5TA78 99 aa6.57□□□□□ -1.36
RER1-204ENST00000378518 KRTAP4-9Q9BYQ8 210 aa6.53□□□□□ -1.36
RER1-204ENST00000378518 KRTAP5-4Q6L8H1 288 aa6.47□□□□□ -1.37
RER1-204ENST00000378518 MT4P47944 62 aa6.43□□□□□ -1.38
RER1-204ENST00000378518 LCE1DQ5T752 114 aa6.43□□□□□ -1.38
RER1-204ENST00000378518 PRO0628Q9UI54 55 aa6.42□□□□□ -1.38
RER1-204ENST00000378518 LOC100996750A0A140TA64 210 aa6.41□□□□□ -1.38
RER1-204ENST00000378518 KRTAP5-5Q701N2 237 aaPredicted RBP6.39□□□□□ -1.39
RER1-204ENST00000378518 KRTAP4-6Q9BYQ5 205 aa6.25□□□□□ -1.41
RER1-204ENST00000378518 PRAC1Q96KF2 57 aa6.24□□□□□ -1.41
RER1-204ENST00000378518 HMCN1Q96RW7 5635 aa6.24□□□□□ -1.41
RER1-204ENST00000378518 KRTAP12-4P60329 112 aa6.2□□□□□ -1.42
RER1-204ENST00000378518 KRTAP9-6A8MVA2 160 aa6.18□□□□□ -1.42
RER1-204ENST00000378518 SPRR5A0A1B0GTR4 108 aa6.13□□□□□ -1.43
RER1-204ENST00000378518 MT1AP04731 61 aa6.1□□□□□ -1.43
RER1-204ENST00000378518 KRTAP20-2Q3LI61 65 aa6.1□□□□□ -1.43
RER1-204ENST00000378518 KTN1-AS1Q86SY8 53 aa6.08□□□□□ -1.44
RER1-204ENST00000378518 SYNE1Q8NF91 8797 aaKnown RBP6.07□□□□□ -1.44
RER1-204ENST00000378518 KRTAP6-1Q3LI64 71 aa6.02□□□□□ -1.45
RER1-204ENST00000378518 GPR98Q8WXG9 6306 aa5.94□□□□□ -1.46
RER1-204ENST00000378518 KRTAP5-3Q6L8H2 238 aa5.88□□□□□ -1.47
RER1-204ENST00000378518 AHNAK2Q8IVF2 5795 aa5.87□□□□□ -1.47
RER1-204ENST00000378518 KRTAP9-4Q9BYQ2 154 aa5.86□□□□□ -1.47
RER1-204ENST00000378518 SVIPQ8NHG7 77 aa5.82□□□□□ -1.48
RER1-204ENST00000378518 KRTAP5-10Q6L8G5 202 aa5.77□□□□□ -1.49
RER1-204ENST00000378518 KRTAP5-2Q701N4 177 aa5.73□□□□□ -1.49
RER1-204ENST00000378518 KRTAP6-2Q3LI66 62 aa5.69□□□□□ -1.5
RER1-204ENST00000378518 MT3P25713 68 aa5.58□□□□□ -1.52
RER1-204ENST00000378518 KRTAP5-7Q6L8G8 165 aa5.51□□□□□ -1.53
RER1-204ENST00000378518 KRTAP4-11Q9BYQ6 195 aa5.47□□□□□ -1.53
RER1-204ENST00000378518 LUZP6Q538Z0 58 aa5.31□□□□□ -1.56
RER1-204ENST00000378518 KRTAP5-8O75690 187 aa5.27□□□□□ -1.57
RER1-204ENST00000378518 OBSCNQ5VST9 7968 aa5.25□□□□□ -1.57
RER1-204ENST00000378518 KRTAP5-1Q6L8H4 278 aa5.06□□□□□ -1.6
RER1-204ENST00000378518 LCE1EQ5T753 118 aa5.02□□□□□ -1.61
RER1-204ENST00000378518 KRTAP9-9Q9BYP9 154 aa4.98□□□□□ -1.61
RER1-204ENST00000378518 LCE3DQ9BYE3 92 aa4.87□□□□□ -1.63
RER1-204ENST00000378518 MUC5ACP98088 5654 aa4.87□□□□□ -1.63
RER1-204ENST00000378518 MUC5BQ9HC84 5762 aaPredicted RBP4.76□□□□□ -1.65
RER1-204ENST00000378518 LCE1BQ5T7P3 118 aa4.71□□□□□ -1.66
RER1-204ENST00000378518 AHNAKQ09666 5890 aaKnown RBP4.68□□□□□ -1.66
RER1-204ENST00000378518 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
RER1-204ENST00000378518 LCE3EQ5T5B0 92 aa4.65□□□□□ -1.67
RER1-204ENST00000378518 LCE1CQ5T751 118 aa4.65□□□□□ -1.67
RER1-204ENST00000378518 NDUFAF8A1L188 74 aa4.55□□□□□ -1.68
RER1-204ENST00000378518 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.28□□□□□ -1.72
RER1-204ENST00000378518 KRTAP5-11Q6L8G4 156 aa4.18□□□□□ -1.74
RER1-204ENST00000378518 KRTAP4-12Q9BQ66 201 aa4.1□□□□□ -1.75
RER1-204ENST00000378518 LCE1FQ5T754 118 aa4□□□□□ -1.77
RER1-204ENST00000378518 KRTAP21-2Q3LI59 83 aa3.95□□□□□ -1.78
RER1-204ENST00000378518 A0A0A0MQY5 61 aa3.84□□□□□ -1.79
RER1-204ENST00000378518 INE1O15225 51 aa3.76□□□□□ -1.81
RER1-204ENST00000378518 PRM1P04553 51 aa3.69□□□□□ -1.82
RER1-204ENST00000378518 PHGR1C9JFL3 82 aa3.59□□□□□ -1.83
RER1-204ENST00000378518 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
RER1-204ENST00000378518 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
RER1-204ENST00000378518 H3BS24 57 aa2.85□□□□□ -1.95
RER1-204ENST00000378518 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
RER1-204ENST00000378518 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 11.4 ms