RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 KRTAP19-7Q3SYF9 63 aa5.86□□□□□ -1.47
CCDC107-204ENST00000378409 KRTAP12-3P60328 96 aa5.82□□□□□ -1.48
CCDC107-204ENST00000378409 MT1EP04732 61 aa5.8□□□□□ -1.48
CCDC107-204ENST00000378409 SPRR2EP22531 72 aa5.75□□□□□ -1.49
CCDC107-204ENST00000378409 SPRR2BP35325 72 aa5.75□□□□□ -1.49
CCDC107-204ENST00000378409 SPRR2AP35326 72 aa5.75□□□□□ -1.49
CCDC107-204ENST00000378409 KRTAP2-2Q9BYT5 123 aa5.67□□□□□ -1.5
CCDC107-204ENST00000378409 KRTAP2-1Q9BYU5 128 aa5.67□□□□□ -1.5
CCDC107-204ENST00000378409 LCE1AQ5T7P2 110 aa5.65□□□□□ -1.5
CCDC107-204ENST00000378409 MT1LQ93083 61 aa5.64□□□□□ -1.51
CCDC107-204ENST00000378409 KRTAP15-1Q3LI76 137 aa5.63□□□□□ -1.51
CCDC107-204ENST00000378409 KRTAP19-3Q7Z4W3 81 aa5.62□□□□□ -1.51
CCDC107-204ENST00000378409 SPRR2DP22532 72 aa5.56□□□□□ -1.52
CCDC107-204ENST00000378409 MT1GP13640 62 aa5.54□□□□□ -1.52
CCDC107-204ENST00000378409 LCE5AQ5TCM9 118 aa5.54□□□□□ -1.52
CCDC107-204ENST00000378409 MT1MQ8N339 61 aa5.48□□□□□ -1.53
CCDC107-204ENST00000378409 KRTAP19-4Q3LI73 84 aa5.45□□□□□ -1.54
CCDC107-204ENST00000378409 LCE3BQ5TA77 95 aa5.44□□□□□ -1.54
CCDC107-204ENST00000378409 LCE3CQ5T5A8 94 aa5.41□□□□□ -1.54
CCDC107-204ENST00000378409 KRTAP4-7Q9BYR0 210 aa5.41□□□□□ -1.54
CCDC107-204ENST00000378409 KRTAP4-3Q9BYR4 195 aa5.36□□□□□ -1.55
CCDC107-204ENST00000378409 GPR98Q8WXG9 6306 aa5.28□□□□□ -1.56
CCDC107-204ENST00000378409 SPRR5A0A1B0GTR4 108 aa5.23□□□□□ -1.57
CCDC107-204ENST00000378409 KRTAP4-9Q9BYQ8 210 aa5.21□□□□□ -1.58
CCDC107-204ENST00000378409 DSTQ03001 7570 aaKnown RBP5.2□□□□□ -1.58
CCDC107-204ENST00000378409 LOC100996750A0A140TA64 210 aa5.11□□□□□ -1.59
CCDC107-204ENST00000378409 KRTAP9-6A8MVA2 160 aa5.1□□□□□ -1.59
CCDC107-204ENST00000378409 LUZP6Q538Z0 58 aa5.1□□□□□ -1.59
CCDC107-204ENST00000378409 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
CCDC107-204ENST00000378409 KRTAP5-5Q701N2 237 aaPredicted RBP4.94□□□□□ -1.62
CCDC107-204ENST00000378409 MT4P47944 62 aa4.92□□□□□ -1.62
CCDC107-204ENST00000378409 NDUFAF8A1L188 74 aa4.89□□□□□ -1.63
CCDC107-204ENST00000378409 HMCN1Q96RW7 5635 aa4.87□□□□□ -1.63
CCDC107-204ENST00000378409 LCE4AQ5TA78 99 aa4.86□□□□□ -1.63
CCDC107-204ENST00000378409 KRTAP5-4Q6L8H1 288 aa4.85□□□□□ -1.63
CCDC107-204ENST00000378409 AHNAK2Q8IVF2 5795 aa4.85□□□□□ -1.63
CCDC107-204ENST00000378409 KRTAP5-10Q6L8G5 202 aa4.84□□□□□ -1.63
CCDC107-204ENST00000378409 MT1AP04731 61 aa4.8□□□□□ -1.64
CCDC107-204ENST00000378409 KRTAP6-1Q3LI64 71 aa4.75□□□□□ -1.65
CCDC107-204ENST00000378409 KRTAP4-6Q9BYQ5 205 aa4.75□□□□□ -1.65
CCDC107-204ENST00000378409 KRTAP12-4P60329 112 aa4.68□□□□□ -1.66
CCDC107-204ENST00000378409 KRTAP5-7Q6L8G8 165 aa4.68□□□□□ -1.66
CCDC107-204ENST00000378409 H3BS24 57 aa4.65□□□□□ -1.67
CCDC107-204ENST00000378409 KRTAP5-3Q6L8H2 238 aa4.65□□□□□ -1.67
CCDC107-204ENST00000378409 SYNE1Q8NF91 8797 aaKnown RBP4.64□□□□□ -1.67
CCDC107-204ENST00000378409 KRTAP9-4Q9BYQ2 154 aa4.57□□□□□ -1.68
CCDC107-204ENST00000378409 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
CCDC107-204ENST00000378409 KRTAP6-2Q3LI66 62 aa4.43□□□□□ -1.7
CCDC107-204ENST00000378409 MT3P25713 68 aa4.36□□□□□ -1.71
CCDC107-204ENST00000378409 A0A0A0MQY5 61 aa4.35□□□□□ -1.71
CCDC107-204ENST00000378409 KRTAP5-2Q701N4 177 aa4.35□□□□□ -1.71
CCDC107-204ENST00000378409 KRTAP4-11Q9BYQ6 195 aa4.18□□□□□ -1.74
CCDC107-204ENST00000378409 INE1O15225 51 aa4.09□□□□□ -1.75
CCDC107-204ENST00000378409 KRTAP5-8O75690 187 aa4.08□□□□□ -1.76
CCDC107-204ENST00000378409 MUC5ACP98088 5654 aa4.04□□□□□ -1.76
CCDC107-204ENST00000378409 AHNAKQ09666 5890 aaKnown RBP4.03□□□□□ -1.76
CCDC107-204ENST00000378409 LCE3DQ9BYE3 92 aa4.02□□□□□ -1.77
CCDC107-204ENST00000378409 MUC5BQ9HC84 5762 aaPredicted RBP4.01□□□□□ -1.77
CCDC107-204ENST00000378409 OBSCNQ5VST9 7968 aa3.98□□□□□ -1.77
CCDC107-204ENST00000378409 KRTAP9-9Q9BYP9 154 aa3.89□□□□□ -1.79
CCDC107-204ENST00000378409 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
CCDC107-204ENST00000378409 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
CCDC107-204ENST00000378409 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
CCDC107-204ENST00000378409 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
CCDC107-204ENST00000378409 KRTAP4-2Q9BYR5 136 aa3.59□□□□□ -1.83
CCDC107-204ENST00000378409 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
CCDC107-204ENST00000378409 PRM1P04553 51 aa3.32□□□□□ -1.88
CCDC107-204ENST00000378409 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
CCDC107-204ENST00000378409 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
CCDC107-204ENST00000378409 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
CCDC107-204ENST00000378409 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
CCDC107-204ENST00000378409 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
CCDC107-204ENST00000378409 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
CCDC107-204ENST00000378409 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
CCDC107-204ENST00000378409 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
CCDC107-204ENST00000378409 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
CCDC107-204ENST00000378409 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 50.4 ms