RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 PRR15LQ9BU68 103 aa4.38□□□□□ -1.71
SMARCE1-203ENST00000377808 A0A0A0MQY5 61 aa4.37□□□□□ -1.71
SMARCE1-203ENST00000377808 KRTAP19-7Q3SYF9 63 aa4.32□□□□□ -1.72
SMARCE1-203ENST00000377808 MT1EP04732 61 aa4.31□□□□□ -1.72
SMARCE1-203ENST00000377808 TMEM258P61165 79 aa4.29□□□□□ -1.72
SMARCE1-203ENST00000377808 LINC01558Q9Y6Z2 57 aa4.28□□□□□ -1.72
SMARCE1-203ENST00000377808 KRTAP19-5Q3LI72 72 aa4.26□□□□□ -1.73
SMARCE1-203ENST00000377808 KRTAP19-3Q7Z4W3 81 aa4.26□□□□□ -1.73
SMARCE1-203ENST00000377808 TNP1P09430 55 aa4.24□□□□□ -1.73
SMARCE1-203ENST00000377808 C10orf95Q9H7T3 257 aa4.22□□□□□ -1.73
SMARCE1-203ENST00000377808 UQCR11O14957 56 aa4.21□□□□□ -1.74
SMARCE1-203ENST00000377808 LCE3AQ5TA76 89 aa4.2□□□□□ -1.74
SMARCE1-203ENST00000377808 DSTQ03001 7570 aaKnown RBP4.19□□□□□ -1.74
SMARCE1-203ENST00000377808 PP632Q6XCG6 107 aa4.16□□□□□ -1.74
SMARCE1-203ENST00000377808 MT1GP13640 62 aa4.15□□□□□ -1.75
SMARCE1-203ENST00000377808 MIR22HGQ0VDD5 57 aa4.12□□□□□ -1.75
SMARCE1-203ENST00000377808 MT1LQ93083 61 aa4.12□□□□□ -1.75
SMARCE1-203ENST00000377808 MT1MQ8N339 61 aa4.1□□□□□ -1.75
SMARCE1-203ENST00000377808 PSPHP1O15172 72 aa4.08□□□□□ -1.76
SMARCE1-203ENST00000377808 K7ERS5 55 aa4.07□□□□□ -1.76
SMARCE1-203ENST00000377808 V9GYY9 64 aa4.07□□□□□ -1.76
SMARCE1-203ENST00000377808 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
SMARCE1-203ENST00000377808 KRTAP12-3P60328 96 aa4.02□□□□□ -1.77
SMARCE1-203ENST00000377808 KRTAP4-3Q9BYR4 195 aa4.02□□□□□ -1.77
SMARCE1-203ENST00000377808 Q1T7F1 81 aa4□□□□□ -1.77
SMARCE1-203ENST00000377808 KRTAP25-1Q3LHN0 102 aa3.98□□□□□ -1.77
SMARCE1-203ENST00000377808 A6NED7 52 aa3.95□□□□□ -1.78
SMARCE1-203ENST00000377808 MT4P47944 62 aa3.95□□□□□ -1.78
SMARCE1-203ENST00000377808 GPR98Q8WXG9 6306 aa3.91□□□□□ -1.78
SMARCE1-203ENST00000377808 HMCN1Q96RW7 5635 aa3.88□□□□□ -1.79
SMARCE1-203ENST00000377808 KRTAP5-4Q6L8H1 288 aa3.84□□□□□ -1.79
SMARCE1-203ENST00000377808 CDC42SE1Q9NRR8 79 aa3.84□□□□□ -1.79
SMARCE1-203ENST00000377808 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
SMARCE1-203ENST00000377808 RPS28P62857 69 aaKnown RBP3.79□□□□□ -1.8
SMARCE1-203ENST00000377808 ROMO1P60602 79 aa3.76□□□□□ -1.81
SMARCE1-203ENST00000377808 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
SMARCE1-203ENST00000377808 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.81
SMARCE1-203ENST00000377808 LCE3CQ5T5A8 94 aa3.7□□□□□ -1.82
SMARCE1-203ENST00000377808 KRTAP12-4P60329 112 aa3.67□□□□□ -1.82
SMARCE1-203ENST00000377808 KRTAP20-2Q3LI61 65 aa3.66□□□□□ -1.82
SMARCE1-203ENST00000377808 SPRR5A0A1B0GTR4 108 aa3.62□□□□□ -1.83
SMARCE1-203ENST00000377808 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
SMARCE1-203ENST00000377808 SYNE1Q8NF91 8797 aaKnown RBP3.6□□□□□ -1.83
SMARCE1-203ENST00000377808 PRAC1Q96KF2 57 aa3.59□□□□□ -1.83
SMARCE1-203ENST00000377808 MT1AP04731 61 aa3.5□□□□□ -1.85
SMARCE1-203ENST00000377808 KRTAP6-1Q3LI64 71 aa3.48□□□□□ -1.85
SMARCE1-203ENST00000377808 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
SMARCE1-203ENST00000377808 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
SMARCE1-203ENST00000377808 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.85
SMARCE1-203ENST00000377808 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.85
SMARCE1-203ENST00000377808 BRK1Q8WUW1 75 aa3.43□□□□□ -1.86
SMARCE1-203ENST00000377808 MT3P25713 68 aa3.38□□□□□ -1.87
SMARCE1-203ENST00000377808 KRTAP5-2Q701N4 177 aa3.37□□□□□ -1.87
SMARCE1-203ENST00000377808 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
SMARCE1-203ENST00000377808 KRTAP6-2Q3LI66 62 aa3.34□□□□□ -1.87
SMARCE1-203ENST00000377808 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
SMARCE1-203ENST00000377808 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
SMARCE1-203ENST00000377808 PMAIP1Q13794 54 aa3.19□□□□□ -1.9
SMARCE1-203ENST00000377808 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
SMARCE1-203ENST00000377808 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
SMARCE1-203ENST00000377808 MUC5BQ9HC84 5762 aaPredicted RBP3.08□□□□□ -1.92
SMARCE1-203ENST00000377808 AHNAKQ09666 5890 aaKnown RBP3.03□□□□□ -1.92
SMARCE1-203ENST00000377808 MUC5ACP98088 5654 aa3□□□□□ -1.93
SMARCE1-203ENST00000377808 PRO0628Q9UI54 55 aa2.93□□□□□ -1.94
SMARCE1-203ENST00000377808 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
SMARCE1-203ENST00000377808 KTN1-AS1Q86SY8 53 aa2.82□□□□□ -1.96
SMARCE1-203ENST00000377808 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
SMARCE1-203ENST00000377808 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
SMARCE1-203ENST00000377808 LUZP6Q538Z0 58 aa2.64□□□□□ -1.99
SMARCE1-203ENST00000377808 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
SMARCE1-203ENST00000377808 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
SMARCE1-203ENST00000377808 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
SMARCE1-203ENST00000377808 PRM1P04553 51 aa1.94□□□□□ -2.1
SMARCE1-203ENST00000377808 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
SMARCE1-203ENST00000377808 INE1O15225 51 aa1.65□□□□□ -2.15
SMARCE1-203ENST00000377808 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
SMARCE1-203ENST00000377808 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 224.6 ms