RNA–Protein interactions for RNA: ENST00000377036.2

DFFA-201, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene DFFA, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-201ENST00000377036 KRTAP4-11Q9BYQ6 195 aa6.45□□□□□ -1.38
DFFA-201ENST00000377036 KRTAP19-5Q3LI72 72 aa6.41□□□□□ -1.38
DFFA-201ENST00000377036 KRTAP19-7Q3SYF9 63 aa6.41□□□□□ -1.38
DFFA-201ENST00000377036 MT1EP04732 61 aa6.35□□□□□ -1.39
DFFA-201ENST00000377036 KRTAP12-3P60328 96 aa6.33□□□□□ -1.4
DFFA-201ENST00000377036 KRTAP5-3Q6L8H2 238 aa6.33□□□□□ -1.4
DFFA-201ENST00000377036 SPRR2EP22531 72 aa6.3□□□□□ -1.4
DFFA-201ENST00000377036 SPRR2BP35325 72 aa6.3□□□□□ -1.4
DFFA-201ENST00000377036 SPRR2AP35326 72 aa6.3□□□□□ -1.4
DFFA-201ENST00000377036 LCE1AQ5T7P2 110 aa6.28□□□□□ -1.4
DFFA-201ENST00000377036 MUC12Q9UKN1 5478 aa6.26□□□□□ -1.41
DFFA-201ENST00000377036 MDN1Q9NU22 5596 aa6.22□□□□□ -1.41
DFFA-201ENST00000377036 KRTAP19-3Q7Z4W3 81 aa6.21□□□□□ -1.42
DFFA-201ENST00000377036 NEBP20929 6669 aa6.19□□□□□ -1.42
DFFA-201ENST00000377036 LCE4AQ5TA78 99 aa6.16□□□□□ -1.42
DFFA-201ENST00000377036 MT1LQ93083 61 aa6.16□□□□□ -1.42
DFFA-201ENST00000377036 MT1GP13640 62 aa6.16□□□□□ -1.42
DFFA-201ENST00000377036 KRTAP19-4Q3LI73 84 aa6.16□□□□□ -1.42
DFFA-201ENST00000377036 LCE5AQ5TCM9 118 aa6.14□□□□□ -1.43
DFFA-201ENST00000377036 KRTAP15-1Q3LI76 137 aa6.11□□□□□ -1.43
DFFA-201ENST00000377036 KTN1-AS1Q86SY8 53 aa6.11□□□□□ -1.43
DFFA-201ENST00000377036 SPRR2DP22532 72 aa6.09□□□□□ -1.43
DFFA-201ENST00000377036 PRAC1Q96KF2 57 aa6.03□□□□□ -1.44
DFFA-201ENST00000377036 MT1MQ8N339 61 aa5.99□□□□□ -1.45
DFFA-201ENST00000377036 KRTAP2-3P0C7H8 128 aa5.95□□□□□ -1.46
DFFA-201ENST00000377036 KRTAP2-4Q9BYR9 128 aa5.95□□□□□ -1.46
DFFA-201ENST00000377036 KRTAP20-1Q3LI63 56 aa5.94□□□□□ -1.46
DFFA-201ENST00000377036 LCE3CQ5T5A8 94 aa5.88□□□□□ -1.47
DFFA-201ENST00000377036 KRTAP2-2Q9BYT5 123 aa5.8□□□□□ -1.48
DFFA-201ENST00000377036 KRTAP2-1Q9BYU5 128 aa5.8□□□□□ -1.48
DFFA-201ENST00000377036 SVIPQ8NHG7 77 aa5.77□□□□□ -1.49
DFFA-201ENST00000377036 KRTAP4-3Q9BYR4 195 aa5.75□□□□□ -1.49
DFFA-201ENST00000377036 DSTQ03001 7570 aaKnown RBP5.69□□□□□ -1.5
DFFA-201ENST00000377036 SPRR5A0A1B0GTR4 108 aa5.45□□□□□ -1.54
DFFA-201ENST00000377036 KRTAP9-6A8MVA2 160 aa5.45□□□□□ -1.54
DFFA-201ENST00000377036 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
DFFA-201ENST00000377036 KRTAP5-4Q6L8H1 288 aa5.42□□□□□ -1.54
DFFA-201ENST00000377036 MT1AP04731 61 aa5.27□□□□□ -1.57
DFFA-201ENST00000377036 KRTAP12-4P60329 112 aa5.26□□□□□ -1.57
DFFA-201ENST00000377036 MT4P47944 62 aa5.25□□□□□ -1.57
DFFA-201ENST00000377036 LUZP6Q538Z0 58 aa5.17□□□□□ -1.58
DFFA-201ENST00000377036 KRTAP6-1Q3LI64 71 aa5.15□□□□□ -1.58
DFFA-201ENST00000377036 HMCN1Q96RW7 5635 aa5.1□□□□□ -1.59
DFFA-201ENST00000377036 SYNE1Q8NF91 8797 aaKnown RBP5.09□□□□□ -1.59
DFFA-201ENST00000377036 KRTAP20-2Q3LI61 65 aa5.07□□□□□ -1.6
DFFA-201ENST00000377036 KRTAP5-2Q701N4 177 aa4.85□□□□□ -1.63
DFFA-201ENST00000377036 KRTAP6-2Q3LI66 62 aa4.84□□□□□ -1.63
DFFA-201ENST00000377036 MT3P25713 68 aa4.83□□□□□ -1.64
DFFA-201ENST00000377036 AHNAK2Q8IVF2 5795 aa4.7□□□□□ -1.66
DFFA-201ENST00000377036 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.67□□□□□ -1.66
DFFA-201ENST00000377036 NDUFAF8A1L188 74 aa4.62□□□□□ -1.67
DFFA-201ENST00000377036 GPR98Q8WXG9 6306 aa4.6□□□□□ -1.67
DFFA-201ENST00000377036 KRTAP5-10Q6L8G5 202 aa4.6□□□□□ -1.67
DFFA-201ENST00000377036 KRTAP5-7Q6L8G8 165 aa4.38□□□□□ -1.71
DFFA-201ENST00000377036 LCE3DQ9BYE3 92 aa4.37□□□□□ -1.71
DFFA-201ENST00000377036 KRTAP5-11Q6L8G4 156 aa4.34□□□□□ -1.71
DFFA-201ENST00000377036 KRTAP5-8O75690 187 aa4.32□□□□□ -1.72
DFFA-201ENST00000377036 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
DFFA-201ENST00000377036 OBSCNQ5VST9 7968 aa4.29□□□□□ -1.72
DFFA-201ENST00000377036 H3BS24 57 aa4.27□□□□□ -1.73
DFFA-201ENST00000377036 KRTAP5-1Q6L8H4 278 aa4.22□□□□□ -1.73
DFFA-201ENST00000377036 LCE3EQ5T5B0 92 aa4.21□□□□□ -1.74
DFFA-201ENST00000377036 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
DFFA-201ENST00000377036 MUC5ACP98088 5654 aa4.03□□□□□ -1.76
DFFA-201ENST00000377036 LCE1CQ5T751 118 aa4□□□□□ -1.77
DFFA-201ENST00000377036 LCE1BQ5T7P3 118 aa4□□□□□ -1.77
DFFA-201ENST00000377036 INE1O15225 51 aa3.91□□□□□ -1.78
DFFA-201ENST00000377036 KRTAP4-4Q9BYR3 166 aa3.87□□□□□ -1.79
DFFA-201ENST00000377036 MUC5BQ9HC84 5762 aaPredicted RBP3.79□□□□□ -1.8
DFFA-201ENST00000377036 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
DFFA-201ENST00000377036 PRM1P04553 51 aa3.43□□□□□ -1.86
DFFA-201ENST00000377036 KRTAP21-2Q3LI59 83 aa3.4□□□□□ -1.87
DFFA-201ENST00000377036 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
DFFA-201ENST00000377036 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
DFFA-201ENST00000377036 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
DFFA-201ENST00000377036 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
DFFA-201ENST00000377036 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 54.1 ms