RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 PLAC4Q8WY50 150 aa2.45□□□□□ -2.02
SSX1-201ENST00000376919 FCGBPQ9Y6R7 5405 aaPredicted RBP2.44□□□□□ -2.02
SSX1-201ENST00000376919 A0A1B0GU69 56 aa2.43□□□□□ -2.02
SSX1-201ENST00000376919 A6NN06 94 aa2.43□□□□□ -2.02
SSX1-201ENST00000376919 KRTAP19-8Q3LI54 63 aa2.43□□□□□ -2.02
SSX1-201ENST00000376919 KRTAP19-6Q3LI70 58 aa2.43□□□□□ -2.02
SSX1-201ENST00000376919 MT1BP07438 61 aa2.42□□□□□ -2.02
SSX1-201ENST00000376919 PRR15LQ9BU68 103 aa2.41□□□□□ -2.02
SSX1-201ENST00000376919 OBSCNQ5VST9 7968 aa2.37□□□□□ -2.03
SSX1-201ENST00000376919 A0A0D9SG42 100 aa2.37□□□□□ -2.03
SSX1-201ENST00000376919 SPATA8Q6RVD6 105 aa2.35□□□□□ -2.03
SSX1-201ENST00000376919 KRTAP5-2Q701N4 177 aa2.35□□□□□ -2.03
SSX1-201ENST00000376919 KRTAP13-4Q3LI77 160 aa2.34□□□□□ -2.03
SSX1-201ENST00000376919 MIR22HGQ0VDD5 57 aa2.33□□□□□ -2.04
SSX1-201ENST00000376919 LINC01558Q9Y6Z2 57 aa2.33□□□□□ -2.04
SSX1-201ENST00000376919 MACF1Q9UPN3 7388 aaKnown RBP2.3□□□□□ -2.04
SSX1-201ENST00000376919 UQCR11O14957 56 aa2.3□□□□□ -2.04
SSX1-201ENST00000376919 MT1XP80297 61 aa2.3□□□□□ -2.04
SSX1-201ENST00000376919 KRTAP4-3Q9BYR4 195 aa2.3□□□□□ -2.04
SSX1-201ENST00000376919 LCE3DQ9BYE3 92 aa2.29□□□□□ -2.04
SSX1-201ENST00000376919 SYNE2Q8WXH0 6885 aaKnown RBP2.27□□□□□ -2.05
SSX1-201ENST00000376919 KRTAP12-1P59990 96 aa2.26□□□□□ -2.05
SSX1-201ENST00000376919 CDC42SE1Q9NRR8 79 aa2.25□□□□□ -2.05
SSX1-201ENST00000376919 KRTAP6-3Q3LI67 103 aa2.24□□□□□ -2.05
SSX1-201ENST00000376919 KRTAP8-1Q8IUC2 63 aa2.23□□□□□ -2.05
SSX1-201ENST00000376919 KMT2DO14686 5537 aa2.23□□□□□ -2.05
SSX1-201ENST00000376919 LCE3AQ5TA76 89 aa2.22□□□□□ -2.05
SSX1-201ENST00000376919 INE1O15225 51 aa2.2□□□□□ -2.06
SSX1-201ENST00000376919 SPRR2FQ96RM1 72 aa2.2□□□□□ -2.06
SSX1-201ENST00000376919 MUC12Q9UKN1 5478 aa2.18□□□□□ -2.06
SSX1-201ENST00000376919 TNP1P09430 55 aa2.18□□□□□ -2.06
SSX1-201ENST00000376919 SPRR2EP22531 72 aa2.15□□□□□ -2.07
SSX1-201ENST00000376919 SPRR2BP35325 72 aa2.15□□□□□ -2.07
SSX1-201ENST00000376919 SPRR2AP35326 72 aa2.15□□□□□ -2.07
SSX1-201ENST00000376919 MDN1Q9NU22 5596 aa2.14□□□□□ -2.07
SSX1-201ENST00000376919 C10orf95Q9H7T3 257 aa2.13□□□□□ -2.07
SSX1-201ENST00000376919 NEBP20929 6669 aa2.12□□□□□ -2.07
SSX1-201ENST00000376919 PP632Q6XCG6 107 aa2.09□□□□□ -2.07
SSX1-201ENST00000376919 SPRR2DP22532 72 aa2.08□□□□□ -2.08
SSX1-201ENST00000376919 KRTAP20-1Q3LI63 56 aa2.07□□□□□ -2.08
SSX1-201ENST00000376919 KRTAP19-5Q3LI72 72 aa2.06□□□□□ -2.08
SSX1-201ENST00000376919 KRTAP5-5Q701N2 237 aaPredicted RBP2.06□□□□□ -2.08
SSX1-201ENST00000376919 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
SSX1-201ENST00000376919 MT1EP04732 61 aa2.04□□□□□ -2.08
SSX1-201ENST00000376919 KRTAP19-7Q3SYF9 63 aa2.04□□□□□ -2.08
SSX1-201ENST00000376919 KRTAP19-3Q7Z4W3 81 aa2.02□□□□□ -2.09
SSX1-201ENST00000376919 KRTAP2-3P0C7H8 128 aa2.01□□□□□ -2.09
SSX1-201ENST00000376919 KRTAP12-3P60328 96 aa2.01□□□□□ -2.09
SSX1-201ENST00000376919 KRTAP2-4Q9BYR9 128 aa2.01□□□□□ -2.09
SSX1-201ENST00000376919 MT1GP13640 62 aa1.97□□□□□ -2.09
SSX1-201ENST00000376919 MT1LQ93083 61 aa1.97□□□□□ -2.09
SSX1-201ENST00000376919 KRTAP2-1Q9BYU5 128 aa1.96□□□□□ -2.1
SSX1-201ENST00000376919 MT1MQ8N339 61 aa1.94□□□□□ -2.1
SSX1-201ENST00000376919 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
SSX1-201ENST00000376919 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
SSX1-201ENST00000376919 DSTQ03001 7570 aaKnown RBP1.9□□□□□ -2.11
SSX1-201ENST00000376919 KRTAP12-4P60329 112 aa1.84□□□□□ -2.11
SSX1-201ENST00000376919 MT4P47944 62 aa1.81□□□□□ -2.12
SSX1-201ENST00000376919 HMCN1Q96RW7 5635 aa1.76□□□□□ -2.13
SSX1-201ENST00000376919 GPR98Q8WXG9 6306 aa1.73□□□□□ -2.13
SSX1-201ENST00000376919 AHNAK2Q8IVF2 5795 aa1.68□□□□□ -2.14
SSX1-201ENST00000376919 MT1AP04731 61 aa1.68□□□□□ -2.14
SSX1-201ENST00000376919 KRTAP20-2Q3LI61 65 aa1.67□□□□□ -2.14
SSX1-201ENST00000376919 KRTAP6-1Q3LI64 71 aa1.66□□□□□ -2.14
SSX1-201ENST00000376919 SYNE1Q8NF91 8797 aaKnown RBP1.64□□□□□ -2.15
SSX1-201ENST00000376919 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
SSX1-201ENST00000376919 KRTAP6-2Q3LI66 62 aa1.58□□□□□ -2.16
SSX1-201ENST00000376919 KRTAP5-10Q6L8G5 202 aa1.57□□□□□ -2.16
SSX1-201ENST00000376919 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
SSX1-201ENST00000376919 MUC5ACP98088 5654 aa1.41□□□□□ -2.18
SSX1-201ENST00000376919 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
SSX1-201ENST00000376919 MUC5BQ9HC84 5762 aaPredicted RBP1.38□□□□□ -2.19
SSX1-201ENST00000376919 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.19
SSX1-201ENST00000376919 PRM1P04553 51 aa1.06□□□□□ -2.24
SSX1-201ENST00000376919 PHGR1C9JFL3 82 aa0.97□□□□□ -2.25
SSX1-201ENST00000376919 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
SSX1-201ENST00000376919 KRTAP21-1Q3LI58 79 aa0.74□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 53 ms