RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 KRTAP12-3P60328 96 aa7.95□□□□□ -1.14
HLA-C-201ENST00000376228 LCE1AQ5T7P2 110 aa7.92□□□□□ -1.14
HLA-C-201ENST00000376228 KRTAP19-5Q3LI72 72 aa7.86□□□□□ -1.15
HLA-C-201ENST00000376228 KRTAP15-1Q3LI76 137 aa7.83□□□□□ -1.16
HLA-C-201ENST00000376228 KRTAP2-3P0C7H8 128 aa7.79□□□□□ -1.16
HLA-C-201ENST00000376228 KRTAP2-4Q9BYR9 128 aa7.79□□□□□ -1.16
HLA-C-201ENST00000376228 KRTAP19-7Q3SYF9 63 aa7.78□□□□□ -1.16
HLA-C-201ENST00000376228 SPRR2DP22532 72 aa7.75□□□□□ -1.17
HLA-C-201ENST00000376228 MT1EP04732 61 aa7.63□□□□□ -1.19
HLA-C-201ENST00000376228 KRTAP19-4Q3LI73 84 aa7.61□□□□□ -1.19
HLA-C-201ENST00000376228 SPRR5A0A1B0GTR4 108 aa7.59□□□□□ -1.19
HLA-C-201ENST00000376228 KRTAP2-2Q9BYT5 123 aa7.56□□□□□ -1.2
HLA-C-201ENST00000376228 KRTAP2-1Q9BYU5 128 aa7.56□□□□□ -1.2
HLA-C-201ENST00000376228 LCE3BQ5TA77 95 aa7.52□□□□□ -1.21
HLA-C-201ENST00000376228 MT1LQ93083 61 aa7.5□□□□□ -1.21
HLA-C-201ENST00000376228 LCE3CQ5T5A8 94 aa7.44□□□□□ -1.22
HLA-C-201ENST00000376228 KRTAP19-3Q7Z4W3 81 aa7.44□□□□□ -1.22
HLA-C-201ENST00000376228 LCE5AQ5TCM9 118 aa7.43□□□□□ -1.22
HLA-C-201ENST00000376228 DSTQ03001 7570 aaKnown RBP7.35□□□□□ -1.23
HLA-C-201ENST00000376228 MT1GP13640 62 aa7.3□□□□□ -1.24
HLA-C-201ENST00000376228 LUZP6Q538Z0 58 aa7.28□□□□□ -1.24
HLA-C-201ENST00000376228 KRTAP4-7Q9BYR0 210 aa7.19□□□□□ -1.26
HLA-C-201ENST00000376228 MT1MQ8N339 61 aa7.18□□□□□ -1.26
HLA-C-201ENST00000376228 NDUFAF8A1L188 74 aa7.11□□□□□ -1.27
HLA-C-201ENST00000376228 KRTAP4-3Q9BYR4 195 aa7.06□□□□□ -1.28
HLA-C-201ENST00000376228 KRTAP9-6A8MVA2 160 aa7.02□□□□□ -1.29
HLA-C-201ENST00000376228 KRTAP4-9Q9BYQ8 210 aa7□□□□□ -1.29
HLA-C-201ENST00000376228 LCE1DQ5T752 114 aa6.82□□□□□ -1.32
HLA-C-201ENST00000376228 LCE4AQ5TA78 99 aa6.81□□□□□ -1.32
HLA-C-201ENST00000376228 MT4P47944 62 aa6.8□□□□□ -1.32
HLA-C-201ENST00000376228 LOC100996750A0A140TA64 210 aa6.75□□□□□ -1.33
HLA-C-201ENST00000376228 KRTAP5-4Q6L8H1 288 aa6.72□□□□□ -1.33
HLA-C-201ENST00000376228 HMCN1Q96RW7 5635 aa6.72□□□□□ -1.33
HLA-C-201ENST00000376228 KRTAP4-6Q9BYQ5 205 aa6.61□□□□□ -1.35
HLA-C-201ENST00000376228 GPR98Q8WXG9 6306 aa6.6□□□□□ -1.35
HLA-C-201ENST00000376228 KRTAP5-5Q701N2 237 aaPredicted RBP6.55□□□□□ -1.36
HLA-C-201ENST00000376228 AHNAK2Q8IVF2 5795 aa6.41□□□□□ -1.38
HLA-C-201ENST00000376228 MT1AP04731 61 aa6.4□□□□□ -1.39
HLA-C-201ENST00000376228 KRTAP20-2Q3LI61 65 aa6.35□□□□□ -1.39
HLA-C-201ENST00000376228 SYNE1Q8NF91 8797 aaKnown RBP6.33□□□□□ -1.4
HLA-C-201ENST00000376228 KRTAP12-4P60329 112 aa6.32□□□□□ -1.4
HLA-C-201ENST00000376228 A0A0A0MQY5 61 aa6.31□□□□□ -1.4
HLA-C-201ENST00000376228 H3BS24 57 aa6.31□□□□□ -1.4
HLA-C-201ENST00000376228 KRTAP6-1Q3LI64 71 aa6.29□□□□□ -1.4
HLA-C-201ENST00000376228 KRTAP5-10Q6L8G5 202 aa6.24□□□□□ -1.41
HLA-C-201ENST00000376228 KRTAP5-3Q6L8H2 238 aa6.15□□□□□ -1.42
HLA-C-201ENST00000376228 KRTAP9-4Q9BYQ2 154 aa6.06□□□□□ -1.44
HLA-C-201ENST00000376228 INE1O15225 51 aa5.97□□□□□ -1.45
HLA-C-201ENST00000376228 KRTAP5-7Q6L8G8 165 aa5.95□□□□□ -1.46
HLA-C-201ENST00000376228 KRTAP5-2Q701N4 177 aa5.92□□□□□ -1.46
HLA-C-201ENST00000376228 KRTAP6-2Q3LI66 62 aa5.84□□□□□ -1.48
HLA-C-201ENST00000376228 MT3P25713 68 aa5.79□□□□□ -1.48
HLA-C-201ENST00000376228 KRTAP4-11Q9BYQ6 195 aa5.76□□□□□ -1.49
HLA-C-201ENST00000376228 OBSCNQ5VST9 7968 aa5.63□□□□□ -1.51
HLA-C-201ENST00000376228 LCE3DQ9BYE3 92 aa5.59□□□□□ -1.51
HLA-C-201ENST00000376228 KRTAP5-8O75690 187 aa5.57□□□□□ -1.52
HLA-C-201ENST00000376228 LCE3EQ5T5B0 92 aa5.46□□□□□ -1.54
HLA-C-201ENST00000376228 KRTAP5-1Q6L8H4 278 aa5.29□□□□□ -1.56
HLA-C-201ENST00000376228 KRTAP9-9Q9BYP9 154 aa5.24□□□□□ -1.57
HLA-C-201ENST00000376228 MUC5BQ9HC84 5762 aaPredicted RBP5.23□□□□□ -1.57
HLA-C-201ENST00000376228 MUC5ACP98088 5654 aa5.2□□□□□ -1.58
HLA-C-201ENST00000376228 AHNAKQ09666 5890 aaKnown RBP5.16□□□□□ -1.58
HLA-C-201ENST00000376228 LCE1EQ5T753 118 aa5.07□□□□□ -1.6
HLA-C-201ENST00000376228 LCE1BQ5T7P3 118 aa4.86□□□□□ -1.63
HLA-C-201ENST00000376228 KRTAP4-2Q9BYR5 136 aa4.83□□□□□ -1.64
HLA-C-201ENST00000376228 PRM1P04553 51 aa4.75□□□□□ -1.65
HLA-C-201ENST00000376228 KRTAP4-12Q9BQ66 201 aa4.73□□□□□ -1.65
HLA-C-201ENST00000376228 LCE1CQ5T751 118 aa4.72□□□□□ -1.65
HLA-C-201ENST00000376228 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.43□□□□□ -1.7
HLA-C-201ENST00000376228 KRTAP5-11Q6L8G4 156 aa4.27□□□□□ -1.73
HLA-C-201ENST00000376228 KRTAP21-2Q3LI59 83 aa4.15□□□□□ -1.75
HLA-C-201ENST00000376228 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
HLA-C-201ENST00000376228 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
HLA-C-201ENST00000376228 PHGR1C9JFL3 82 aa3.69□□□□□ -1.82
HLA-C-201ENST00000376228 MUC19Q7Z5P9 8384 aa3.43□□□□□ -1.86
HLA-C-201ENST00000376228 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
HLA-C-201ENST00000376228 MUC16Q8WXI7 14507 aa2.41□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 7.2 ms