RNA–Protein interactions for RNA: ENST00000375710.7

LDHA-202, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 2,169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-202ENST00000375710 SYNE2Q8WXH0 6885 aaKnown RBP3.04□□□□□ -1.92
LDHA-202ENST00000375710 KRTAP5-9P26371 169 aa3.02□□□□□ -1.93
LDHA-202ENST00000375710 SPRR2GQ9BYE4 73 aa3.01□□□□□ -1.93
LDHA-202ENST00000375710 KRTAP19-8Q3LI54 63 aa2.99□□□□□ -1.93
LDHA-202ENST00000375710 MT1BP07438 61 aa2.98□□□□□ -1.93
LDHA-202ENST00000375710 KRTAP6-3Q3LI67 103 aa2.92□□□□□ -1.94
LDHA-202ENST00000375710 KRTAP10-5P60370 271 aa2.91□□□□□ -1.94
LDHA-202ENST00000375710 LCE4AQ5TA78 99 aa2.88□□□□□ -1.95
LDHA-202ENST00000375710 MUC12Q9UKN1 5478 aa2.84□□□□□ -1.95
LDHA-202ENST00000375710 NEBP20929 6669 aa2.83□□□□□ -1.96
LDHA-202ENST00000375710 TNP1P09430 55 aa2.81□□□□□ -1.96
LDHA-202ENST00000375710 MT1XP80297 61 aa2.8□□□□□ -1.96
LDHA-202ENST00000375710 KMT2DO14686 5537 aa2.79□□□□□ -1.96
LDHA-202ENST00000375710 KRTAP5-4Q6L8H1 288 aa2.78□□□□□ -1.96
LDHA-202ENST00000375710 MDN1Q9NU22 5596 aa2.76□□□□□ -1.97
LDHA-202ENST00000375710 SPRR2FQ96RM1 72 aa2.68□□□□□ -1.98
LDHA-202ENST00000375710 KRTAP8-1Q8IUC2 63 aa2.68□□□□□ -1.98
LDHA-202ENST00000375710 KRTAP10-12P60413 245 aa2.67□□□□□ -1.98
LDHA-202ENST00000375710 KRTAP20-1Q3LI63 56 aa2.67□□□□□ -1.98
LDHA-202ENST00000375710 KRTAP19-4Q3LI73 84 aa2.67□□□□□ -1.98
LDHA-202ENST00000375710 KRTAP10-7P60409 375 aaPredicted RBP2.66□□□□□ -1.98
LDHA-202ENST00000375710 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
LDHA-202ENST00000375710 KRTAP5-1Q6L8H4 278 aa2.64□□□□□ -1.99
LDHA-202ENST00000375710 SPRR2EP22531 72 aa2.64□□□□□ -1.99
LDHA-202ENST00000375710 SPRR2BP35325 72 aa2.64□□□□□ -1.99
LDHA-202ENST00000375710 SPRR2AP35326 72 aa2.64□□□□□ -1.99
LDHA-202ENST00000375710 LCE1AQ5T7P2 110 aa2.63□□□□□ -1.99
LDHA-202ENST00000375710 KRTAP2-3P0C7H8 128 aa2.63□□□□□ -1.99
LDHA-202ENST00000375710 KRTAP2-4Q9BYR9 128 aa2.63□□□□□ -1.99
LDHA-202ENST00000375710 KRTAP5-11Q6L8G4 156 aa2.59□□□□□ -1.99
LDHA-202ENST00000375710 SPRR2DP22532 72 aa2.55□□□□□ -2
LDHA-202ENST00000375710 KRTAP2-2Q9BYT5 123 aa2.54□□□□□ -2
LDHA-202ENST00000375710 KRTAP2-1Q9BYU5 128 aa2.54□□□□□ -2
LDHA-202ENST00000375710 LCE3AQ5TA76 89 aa2.54□□□□□ -2
LDHA-202ENST00000375710 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
LDHA-202ENST00000375710 KRTAP19-7Q3SYF9 63 aa2.51□□□□□ -2.01
LDHA-202ENST00000375710 MT1EP04732 61 aa2.47□□□□□ -2.01
LDHA-202ENST00000375710 DSTQ03001 7570 aaKnown RBP2.47□□□□□ -2.01
LDHA-202ENST00000375710 HMCN1Q96RW7 5635 aa2.47□□□□□ -2.01
LDHA-202ENST00000375710 KRTAP19-3Q7Z4W3 81 aa2.45□□□□□ -2.02
LDHA-202ENST00000375710 KRTAP19-5Q3LI72 72 aa2.43□□□□□ -2.02
LDHA-202ENST00000375710 MT1GP13640 62 aa2.41□□□□□ -2.02
LDHA-202ENST00000375710 KRTAP12-3P60328 96 aa2.41□□□□□ -2.02
LDHA-202ENST00000375710 MT1LQ93083 61 aa2.37□□□□□ -2.03
LDHA-202ENST00000375710 MT1MQ8N339 61 aa2.35□□□□□ -2.03
LDHA-202ENST00000375710 LCE3CQ5T5A8 94 aa2.31□□□□□ -2.04
LDHA-202ENST00000375710 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
LDHA-202ENST00000375710 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
LDHA-202ENST00000375710 KRTAP4-3Q9BYR4 195 aa2.29□□□□□ -2.04
LDHA-202ENST00000375710 KRTAP12-4P60329 112 aa2.26□□□□□ -2.05
LDHA-202ENST00000375710 KRTAP9-6A8MVA2 160 aa2.23□□□□□ -2.05
LDHA-202ENST00000375710 MT4P47944 62 aa2.22□□□□□ -2.05
LDHA-202ENST00000375710 LCE1EQ5T753 118 aa2.2□□□□□ -2.06
LDHA-202ENST00000375710 KRTAP5-5Q701N2 237 aaPredicted RBP2.18□□□□□ -2.06
LDHA-202ENST00000375710 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
LDHA-202ENST00000375710 SYNE1Q8NF91 8797 aaKnown RBP2.14□□□□□ -2.07
LDHA-202ENST00000375710 KRTAP20-2Q3LI61 65 aa2.11□□□□□ -2.07
LDHA-202ENST00000375710 KRTAP5-10Q6L8G5 202 aa2.11□□□□□ -2.07
LDHA-202ENST00000375710 LCE1FQ5T754 118 aa2.08□□□□□ -2.08
LDHA-202ENST00000375710 OBSCNQ5VST9 7968 aa2.07□□□□□ -2.08
LDHA-202ENST00000375710 PRM1P04553 51 aa2.06□□□□□ -2.08
LDHA-202ENST00000375710 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
LDHA-202ENST00000375710 MT1AP04731 61 aa2.02□□□□□ -2.09
LDHA-202ENST00000375710 KRTAP6-1Q3LI64 71 aa2□□□□□ -2.09
LDHA-202ENST00000375710 MT3P25713 68 aa1.99□□□□□ -2.09
LDHA-202ENST00000375710 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
LDHA-202ENST00000375710 LCE3EQ5T5B0 92 aa1.91□□□□□ -2.1
LDHA-202ENST00000375710 KRTAP6-2Q3LI66 62 aa1.9□□□□□ -2.11
LDHA-202ENST00000375710 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
LDHA-202ENST00000375710 AHNAKQ09666 5890 aaKnown RBP1.85□□□□□ -2.11
LDHA-202ENST00000375710 MUC5ACP98088 5654 aa1.77□□□□□ -2.13
LDHA-202ENST00000375710 LCE1CQ5T751 118 aa1.58□□□□□ -2.16
LDHA-202ENST00000375710 LCE1BQ5T7P3 118 aa1.58□□□□□ -2.16
LDHA-202ENST00000375710 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.18
LDHA-202ENST00000375710 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
LDHA-202ENST00000375710 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
LDHA-202ENST00000375710 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
LDHA-202ENST00000375710 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 26.8 ms