RNA–Protein interactions for RNA: ENST00000375640.7

C6orf48-205, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 1,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-205ENST00000375640 C10orf95Q9H7T3 257 aa7.28□□□□□ -1.24
C6orf48-205ENST00000375640 LCE4AQ5TA78 99 aa7.25□□□□□ -1.25
C6orf48-205ENST00000375640 MT1GP13640 62 aa7.24□□□□□ -1.25
C6orf48-205ENST00000375640 UQCR11O14957 56 aa7.2□□□□□ -1.26
C6orf48-205ENST00000375640 DSTQ03001 7570 aaKnown RBP7.18□□□□□ -1.26
C6orf48-205ENST00000375640 LCE3AQ5TA76 89 aa7.17□□□□□ -1.26
C6orf48-205ENST00000375640 PP632Q6XCG6 107 aa7.17□□□□□ -1.26
C6orf48-205ENST00000375640 MT1LQ93083 61 aa7.11□□□□□ -1.27
C6orf48-205ENST00000375640 MT1MQ8N339 61 aa7.07□□□□□ -1.28
C6orf48-205ENST00000375640 MIR22HGQ0VDD5 57 aa7.04□□□□□ -1.28
C6orf48-205ENST00000375640 V9GYY9 64 aa6.98□□□□□ -1.29
C6orf48-205ENST00000375640 KRTAP12-3P60328 96 aa6.93□□□□□ -1.3
C6orf48-205ENST00000375640 KRTAP19-4Q3LI73 84 aa6.93□□□□□ -1.3
C6orf48-205ENST00000375640 K7ERS5 55 aa6.92□□□□□ -1.3
C6orf48-205ENST00000375640 Q1T7F1 81 aa6.91□□□□□ -1.3
C6orf48-205ENST00000375640 KRTAP5-3Q6L8H2 238 aa6.9□□□□□ -1.3
C6orf48-205ENST00000375640 PSPHP1O15172 72 aa6.89□□□□□ -1.31
C6orf48-205ENST00000375640 KRTAP25-1Q3LHN0 102 aa6.89□□□□□ -1.31
C6orf48-205ENST00000375640 KRTAP4-3Q9BYR4 195 aa6.87□□□□□ -1.31
C6orf48-205ENST00000375640 GPR98Q8WXG9 6306 aa6.74□□□□□ -1.33
C6orf48-205ENST00000375640 MT4P47944 62 aa6.73□□□□□ -1.33
C6orf48-205ENST00000375640 KRTAP5-4Q6L8H1 288 aa6.73□□□□□ -1.33
C6orf48-205ENST00000375640 SVIPQ8NHG7 77 aa6.68□□□□□ -1.34
C6orf48-205ENST00000375640 HMCN1Q96RW7 5635 aa6.67□□□□□ -1.34
C6orf48-205ENST00000375640 KRTAP23-1A1A580 65 aa6.67□□□□□ -1.34
C6orf48-205ENST00000375640 A6NED7 52 aa6.67□□□□□ -1.34
C6orf48-205ENST00000375640 RPS28P62857 69 aaKnown RBP6.6□□□□□ -1.35
C6orf48-205ENST00000375640 CDC42SE1Q9NRR8 79 aa6.53□□□□□ -1.36
C6orf48-205ENST00000375640 KRTAP15-1Q3LI76 137 aa6.5□□□□□ -1.37
C6orf48-205ENST00000375640 KRTAP5-5Q701N2 237 aaPredicted RBP6.49□□□□□ -1.37
C6orf48-205ENST00000375640 PCP4P48539 62 aa6.46□□□□□ -1.38
C6orf48-205ENST00000375640 ROMO1P60602 79 aa6.44□□□□□ -1.38
C6orf48-205ENST00000375640 AHNAK2Q8IVF2 5795 aa6.4□□□□□ -1.39
C6orf48-205ENST00000375640 LCE3CQ5T5A8 94 aa6.39□□□□□ -1.39
C6orf48-205ENST00000375640 SPRR5A0A1B0GTR4 108 aa6.35□□□□□ -1.39
C6orf48-205ENST00000375640 KRTAP12-4P60329 112 aa6.34□□□□□ -1.39
C6orf48-205ENST00000375640 KRTAP20-2Q3LI61 65 aa6.33□□□□□ -1.4
C6orf48-205ENST00000375640 KRTAP5-10Q6L8G5 202 aa6.3□□□□□ -1.4
C6orf48-205ENST00000375640 SYNE1Q8NF91 8797 aaKnown RBP6.26□□□□□ -1.41
C6orf48-205ENST00000375640 H3BS24 57 aa6.1□□□□□ -1.43
C6orf48-205ENST00000375640 KRTAP5-7Q6L8G8 165 aa6.07□□□□□ -1.44
C6orf48-205ENST00000375640 MT1AP04731 61 aa6.06□□□□□ -1.44
C6orf48-205ENST00000375640 KRTAP6-1Q3LI64 71 aa6□□□□□ -1.45
C6orf48-205ENST00000375640 KRTAP9-6A8MVA2 160 aa5.99□□□□□ -1.45
C6orf48-205ENST00000375640 KRTAP5-2Q701N4 177 aa5.9□□□□□ -1.46
C6orf48-205ENST00000375640 KRTAP6-2Q3LI66 62 aa5.74□□□□□ -1.49
C6orf48-205ENST00000375640 BRK1Q8WUW1 75 aa5.73□□□□□ -1.49
C6orf48-205ENST00000375640 KRTAP5-8O75690 187 aa5.58□□□□□ -1.52
C6orf48-205ENST00000375640 MT3P25713 68 aa5.57□□□□□ -1.52
C6orf48-205ENST00000375640 OBSCNQ5VST9 7968 aa5.46□□□□□ -1.54
C6orf48-205ENST00000375640 PMAIP1Q13794 54 aa5.41□□□□□ -1.54
C6orf48-205ENST00000375640 KRTAP5-1Q6L8H4 278 aa5.28□□□□□ -1.56
C6orf48-205ENST00000375640 MUC5BQ9HC84 5762 aaPredicted RBP5.27□□□□□ -1.57
C6orf48-205ENST00000375640 AHNAKQ09666 5890 aaKnown RBP5.27□□□□□ -1.57
C6orf48-205ENST00000375640 MUC5ACP98088 5654 aa5.25□□□□□ -1.57
C6orf48-205ENST00000375640 PRAC1Q96KF2 57 aa5.18□□□□□ -1.58
C6orf48-205ENST00000375640 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.13□□□□□ -1.59
C6orf48-205ENST00000375640 LCE1EQ5T753 118 aa5.12□□□□□ -1.59
C6orf48-205ENST00000375640 PRO0628Q9UI54 55 aa4.99□□□□□ -1.61
C6orf48-205ENST00000375640 KRTAP5-11Q6L8G4 156 aa4.92□□□□□ -1.62
C6orf48-205ENST00000375640 A0A0A0MQY5 61 aa4.85□□□□□ -1.63
C6orf48-205ENST00000375640 LCE1BQ5T7P3 118 aa4.77□□□□□ -1.65
C6orf48-205ENST00000375640 KTN1-AS1Q86SY8 53 aa4.77□□□□□ -1.65
C6orf48-205ENST00000375640 LCE1CQ5T751 118 aa4.74□□□□□ -1.65
C6orf48-205ENST00000375640 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
C6orf48-205ENST00000375640 LUZP6Q538Z0 58 aa4.44□□□□□ -1.7
C6orf48-205ENST00000375640 LCE3EQ5T5B0 92 aa4.36□□□□□ -1.71
C6orf48-205ENST00000375640 KRTAP4-4Q9BYR3 166 aa4.26□□□□□ -1.73
C6orf48-205ENST00000375640 LCE1FQ5T754 118 aa4.18□□□□□ -1.74
C6orf48-205ENST00000375640 KRTAP21-2Q3LI59 83 aa3.97□□□□□ -1.77
C6orf48-205ENST00000375640 PHGR1C9JFL3 82 aa3.68□□□□□ -1.82
C6orf48-205ENST00000375640 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
C6orf48-205ENST00000375640 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
C6orf48-205ENST00000375640 PRM1P04553 51 aa3.27□□□□□ -1.89
C6orf48-205ENST00000375640 INE1O15225 51 aa2.96□□□□□ -1.94
C6orf48-205ENST00000375640 KRTAP21-1Q3LI58 79 aa2.81□□□□□ -1.96
C6orf48-205ENST00000375640 MUC16Q8WXI7 14507 aa2.45□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 110.3 ms