RNA–Protein interactions for RNA: ENST00000375639.6

C6orf48-204, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-204ENST00000375639 BRK1Q8WUW1 75 aa6.77□□□□□ -1.33
C6orf48-204ENST00000375639 KRTAP25-1Q3LHN0 102 aa6.72□□□□□ -1.33
C6orf48-204ENST00000375639 KRTAP4-7Q9BYR0 210 aa6.72□□□□□ -1.33
C6orf48-204ENST00000375639 LCE1AQ5T7P2 110 aa6.69□□□□□ -1.34
C6orf48-204ENST00000375639 ROMO1P60602 79 aa6.68□□□□□ -1.34
C6orf48-204ENST00000375639 LCE3AQ5TA76 89 aa6.68□□□□□ -1.34
C6orf48-204ENST00000375639 SPRR2DP22532 72 aa6.65□□□□□ -1.34
C6orf48-204ENST00000375639 LCE1DQ5T752 114 aa6.63□□□□□ -1.35
C6orf48-204ENST00000375639 KRTAP19-7Q3SYF9 63 aa6.6□□□□□ -1.35
C6orf48-204ENST00000375639 KRTAP19-5Q3LI72 72 aa6.59□□□□□ -1.35
C6orf48-204ENST00000375639 MT1EP04732 61 aa6.53□□□□□ -1.36
C6orf48-204ENST00000375639 KRTAP4-9Q9BYQ8 210 aa6.5□□□□□ -1.37
C6orf48-204ENST00000375639 KRTAP23-1A1A580 65 aa6.46□□□□□ -1.38
C6orf48-204ENST00000375639 KRTAP4-2Q9BYR5 136 aa6.45□□□□□ -1.38
C6orf48-204ENST00000375639 KRTAP12-3P60328 96 aa6.43□□□□□ -1.38
C6orf48-204ENST00000375639 DSTQ03001 7570 aaKnown RBP6.39□□□□□ -1.39
C6orf48-204ENST00000375639 PMAIP1Q13794 54 aa6.39□□□□□ -1.39
C6orf48-204ENST00000375639 KRTAP19-3Q7Z4W3 81 aa6.38□□□□□ -1.39
C6orf48-204ENST00000375639 PP632Q6XCG6 107 aa6.36□□□□□ -1.39
C6orf48-204ENST00000375639 MT1LQ93083 61 aa6.32□□□□□ -1.4
C6orf48-204ENST00000375639 LCE5AQ5TCM9 118 aa6.31□□□□□ -1.4
C6orf48-204ENST00000375639 PRO0628Q9UI54 55 aa6.31□□□□□ -1.4
C6orf48-204ENST00000375639 MT1GP13640 62 aa6.29□□□□□ -1.4
C6orf48-204ENST00000375639 KRTAP4-11Q9BYQ6 195 aa6.21□□□□□ -1.42
C6orf48-204ENST00000375639 MT1MQ8N339 61 aa6.19□□□□□ -1.42
C6orf48-204ENST00000375639 KRTAP15-1Q3LI76 137 aa6.17□□□□□ -1.42
C6orf48-204ENST00000375639 HMCN1Q96RW7 5635 aa6.09□□□□□ -1.43
C6orf48-204ENST00000375639 LCE4AQ5TA78 99 aa6.08□□□□□ -1.44
C6orf48-204ENST00000375639 AHNAK2Q8IVF2 5795 aa6.08□□□□□ -1.44
C6orf48-204ENST00000375639 KRTAP19-4Q3LI73 84 aa6.05□□□□□ -1.44
C6orf48-204ENST00000375639 KRTAP4-3Q9BYR4 195 aa6.05□□□□□ -1.44
C6orf48-204ENST00000375639 PRAC1Q96KF2 57 aa6.04□□□□□ -1.44
C6orf48-204ENST00000375639 KRTAP5-10Q6L8G5 202 aa6.02□□□□□ -1.45
C6orf48-204ENST00000375639 LCE3CQ5T5A8 94 aa5.96□□□□□ -1.46
C6orf48-204ENST00000375639 KRTAP5-3Q6L8H2 238 aa5.96□□□□□ -1.46
C6orf48-204ENST00000375639 KTN1-AS1Q86SY8 53 aa5.92□□□□□ -1.46
C6orf48-204ENST00000375639 KRTAP5-7Q6L8G8 165 aa5.89□□□□□ -1.47
C6orf48-204ENST00000375639 MT4P47944 62 aa5.88□□□□□ -1.47
C6orf48-204ENST00000375639 SPRR5A0A1B0GTR4 108 aa5.69□□□□□ -1.5
C6orf48-204ENST00000375639 SVIPQ8NHG7 77 aa5.66□□□□□ -1.5
C6orf48-204ENST00000375639 KRTAP9-6A8MVA2 160 aa5.6□□□□□ -1.51
C6orf48-204ENST00000375639 KRTAP5-4Q6L8H1 288 aa5.6□□□□□ -1.51
C6orf48-204ENST00000375639 KRTAP5-5Q701N2 237 aaPredicted RBP5.6□□□□□ -1.51
C6orf48-204ENST00000375639 MT1AP04731 61 aa5.39□□□□□ -1.55
C6orf48-204ENST00000375639 KRTAP12-4P60329 112 aa5.37□□□□□ -1.55
C6orf48-204ENST00000375639 KRTAP6-1Q3LI64 71 aa5.34□□□□□ -1.55
C6orf48-204ENST00000375639 SYNE1Q8NF91 8797 aaKnown RBP5.33□□□□□ -1.56
C6orf48-204ENST00000375639 KRTAP20-2Q3LI61 65 aa5.33□□□□□ -1.56
C6orf48-204ENST00000375639 AHNAKQ09666 5890 aaKnown RBP5.31□□□□□ -1.56
C6orf48-204ENST00000375639 MUC5ACP98088 5654 aa5.17□□□□□ -1.58
C6orf48-204ENST00000375639 MUC5BQ9HC84 5762 aaPredicted RBP5.11□□□□□ -1.59
C6orf48-204ENST00000375639 LUZP6Q538Z0 58 aa5.02□□□□□ -1.61
C6orf48-204ENST00000375639 KRTAP6-2Q3LI66 62 aa5.01□□□□□ -1.61
C6orf48-204ENST00000375639 KRTAP5-2Q701N4 177 aa4.97□□□□□ -1.61
C6orf48-204ENST00000375639 KRTAP5-8O75690 187 aa4.95□□□□□ -1.62
C6orf48-204ENST00000375639 MT3P25713 68 aa4.91□□□□□ -1.62
C6orf48-204ENST00000375639 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
C6orf48-204ENST00000375639 H3BS24 57 aa4.63□□□□□ -1.67
C6orf48-204ENST00000375639 NDUFAF8A1L188 74 aa4.51□□□□□ -1.69
C6orf48-204ENST00000375639 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.43□□□□□ -1.7
C6orf48-204ENST00000375639 KRTAP5-1Q6L8H4 278 aa4.43□□□□□ -1.7
C6orf48-204ENST00000375639 LCE3DQ9BYE3 92 aa4.4□□□□□ -1.71
C6orf48-204ENST00000375639 LCE1EQ5T753 118 aa4.36□□□□□ -1.71
C6orf48-204ENST00000375639 LCE3EQ5T5B0 92 aa4.23□□□□□ -1.73
C6orf48-204ENST00000375639 KRTAP5-11Q6L8G4 156 aa4.2□□□□□ -1.74
C6orf48-204ENST00000375639 LCE1BQ5T7P3 118 aa4.14□□□□□ -1.75
C6orf48-204ENST00000375639 LCE1CQ5T751 118 aa4.05□□□□□ -1.76
C6orf48-204ENST00000375639 A0A0A0MQY5 61 aa3.83□□□□□ -1.8
C6orf48-204ENST00000375639 INE1O15225 51 aa3.69□□□□□ -1.82
C6orf48-204ENST00000375639 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
C6orf48-204ENST00000375639 PHGR1C9JFL3 82 aa3.53□□□□□ -1.84
C6orf48-204ENST00000375639 KRTAP21-2Q3LI59 83 aa3.5□□□□□ -1.85
C6orf48-204ENST00000375639 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
C6orf48-204ENST00000375639 PRM1P04553 51 aa3.46□□□□□ -1.86
C6orf48-204ENST00000375639 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
C6orf48-204ENST00000375639 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
C6orf48-204ENST00000375639 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms