RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 Q1T7F1 81 aa5.91□□□□□ -1.46
C11orf88-202ENST00000375618 KRTAP19-5Q3LI72 72 aa5.91□□□□□ -1.46
C11orf88-202ENST00000375618 KRTAP5-3Q6L8H2 238 aa5.9□□□□□ -1.46
C11orf88-202ENST00000375618 MIR22HGQ0VDD5 57 aa5.89□□□□□ -1.47
C11orf88-202ENST00000375618 TNP1P09430 55 aa5.86□□□□□ -1.47
C11orf88-202ENST00000375618 PCP4P48539 62 aa5.86□□□□□ -1.47
C11orf88-202ENST00000375618 LCE3AQ5TA76 89 aa5.86□□□□□ -1.47
C11orf88-202ENST00000375618 V9GYY9 64 aa5.86□□□□□ -1.47
C11orf88-202ENST00000375618 H3BS24 57 aa5.83□□□□□ -1.48
C11orf88-202ENST00000375618 KRTAP19-3Q7Z4W3 81 aa5.83□□□□□ -1.48
C11orf88-202ENST00000375618 KRTAP2-2Q9BYT5 123 aa5.82□□□□□ -1.48
C11orf88-202ENST00000375618 KRTAP2-1Q9BYU5 128 aa5.82□□□□□ -1.48
C11orf88-202ENST00000375618 RPS28P62857 69 aaKnown RBP5.74□□□□□ -1.49
C11orf88-202ENST00000375618 MT1LQ93083 61 aa5.71□□□□□ -1.5
C11orf88-202ENST00000375618 MT1GP13640 62 aa5.69□□□□□ -1.5
C11orf88-202ENST00000375618 A6NED7 52 aa5.68□□□□□ -1.5
C11orf88-202ENST00000375618 K7ERS5 55 aa5.65□□□□□ -1.5
C11orf88-202ENST00000375618 MT1MQ8N339 61 aa5.65□□□□□ -1.5
C11orf88-202ENST00000375618 KRTAP25-1Q3LHN0 102 aa5.61□□□□□ -1.51
C11orf88-202ENST00000375618 KRTAP12-3P60328 96 aa5.6□□□□□ -1.51
C11orf88-202ENST00000375618 DSTQ03001 7570 aaKnown RBP5.6□□□□□ -1.51
C11orf88-202ENST00000375618 PP632Q6XCG6 107 aa5.58□□□□□ -1.52
C11orf88-202ENST00000375618 KRTAP4-3Q9BYR4 195 aa5.57□□□□□ -1.52
C11orf88-202ENST00000375618 CDC42SE1Q9NRR8 79 aa5.46□□□□□ -1.54
C11orf88-202ENST00000375618 KRTAP23-1A1A580 65 aa5.4□□□□□ -1.54
C11orf88-202ENST00000375618 ROMO1P60602 79 aa5.39□□□□□ -1.55
C11orf88-202ENST00000375618 KRTAP15-1Q3LI76 137 aa5.29□□□□□ -1.56
C11orf88-202ENST00000375618 KRTAP5-4Q6L8H1 288 aa5.28□□□□□ -1.56
C11orf88-202ENST00000375618 MT4P47944 62 aa5.24□□□□□ -1.57
C11orf88-202ENST00000375618 LCE3CQ5T5A8 94 aa5.18□□□□□ -1.58
C11orf88-202ENST00000375618 KRTAP5-5Q701N2 237 aaPredicted RBP5.18□□□□□ -1.58
C11orf88-202ENST00000375618 HMCN1Q96RW7 5635 aa5.17□□□□□ -1.58
C11orf88-202ENST00000375618 BRK1Q8WUW1 75 aa5.06□□□□□ -1.6
C11orf88-202ENST00000375618 GPR98Q8WXG9 6306 aa5.03□□□□□ -1.6
C11orf88-202ENST00000375618 SVIPQ8NHG7 77 aa5.02□□□□□ -1.61
C11orf88-202ENST00000375618 KRTAP9-6A8MVA2 160 aa4.98□□□□□ -1.61
C11orf88-202ENST00000375618 AHNAK2Q8IVF2 5795 aa4.97□□□□□ -1.61
C11orf88-202ENST00000375618 KRTAP20-2Q3LI61 65 aa4.96□□□□□ -1.62
C11orf88-202ENST00000375618 SYNE1Q8NF91 8797 aaKnown RBP4.92□□□□□ -1.62
C11orf88-202ENST00000375618 SPRR5A0A1B0GTR4 108 aa4.92□□□□□ -1.62
C11orf88-202ENST00000375618 KRTAP12-4P60329 112 aa4.9□□□□□ -1.63
C11orf88-202ENST00000375618 MT1AP04731 61 aa4.85□□□□□ -1.63
C11orf88-202ENST00000375618 KRTAP6-1Q3LI64 71 aa4.85□□□□□ -1.63
C11orf88-202ENST00000375618 KRTAP5-10Q6L8G5 202 aa4.82□□□□□ -1.64
C11orf88-202ENST00000375618 PMAIP1Q13794 54 aa4.74□□□□□ -1.65
C11orf88-202ENST00000375618 KRTAP5-2Q701N4 177 aa4.67□□□□□ -1.66
C11orf88-202ENST00000375618 PRAC1Q96KF2 57 aa4.64□□□□□ -1.67
C11orf88-202ENST00000375618 KRTAP5-7Q6L8G8 165 aa4.59□□□□□ -1.67
C11orf88-202ENST00000375618 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
C11orf88-202ENST00000375618 PRO0628Q9UI54 55 aa4.52□□□□□ -1.69
C11orf88-202ENST00000375618 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.44□□□□□ -1.7
C11orf88-202ENST00000375618 MT3P25713 68 aa4.39□□□□□ -1.71
C11orf88-202ENST00000375618 KRTAP5-8O75690 187 aa4.34□□□□□ -1.71
C11orf88-202ENST00000375618 KTN1-AS1Q86SY8 53 aa4.3□□□□□ -1.72
C11orf88-202ENST00000375618 KRTAP5-11Q6L8G4 156 aa4.28□□□□□ -1.72
C11orf88-202ENST00000375618 OBSCNQ5VST9 7968 aa4.24□□□□□ -1.73
C11orf88-202ENST00000375618 KRTAP5-1Q6L8H4 278 aa4.16□□□□□ -1.74
C11orf88-202ENST00000375618 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
C11orf88-202ENST00000375618 MUC5ACP98088 5654 aa4.02□□□□□ -1.77
C11orf88-202ENST00000375618 AHNAKQ09666 5890 aaKnown RBP4.01□□□□□ -1.77
C11orf88-202ENST00000375618 MUC5BQ9HC84 5762 aaPredicted RBP4□□□□□ -1.77
C11orf88-202ENST00000375618 A0A0A0MQY5 61 aa3.79□□□□□ -1.8
C11orf88-202ENST00000375618 LCE1BQ5T7P3 118 aa3.77□□□□□ -1.81
C11orf88-202ENST00000375618 LCE3DQ9BYE3 92 aa3.74□□□□□ -1.81
C11orf88-202ENST00000375618 LUZP6Q538Z0 58 aa3.73□□□□□ -1.81
C11orf88-202ENST00000375618 LCE1CQ5T751 118 aa3.71□□□□□ -1.82
C11orf88-202ENST00000375618 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
C11orf88-202ENST00000375618 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
C11orf88-202ENST00000375618 NDUFAF8A1L188 74 aa3.21□□□□□ -1.9
C11orf88-202ENST00000375618 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
C11orf88-202ENST00000375618 KRTAP21-2Q3LI59 83 aa3.19□□□□□ -1.9
C11orf88-202ENST00000375618 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
C11orf88-202ENST00000375618 PRM1P04553 51 aa2.8□□□□□ -1.96
C11orf88-202ENST00000375618 MUC19Q7Z5P9 8384 aa2.59□□□□□ -2
C11orf88-202ENST00000375618 INE1O15225 51 aa2.53□□□□□ -2
C11orf88-202ENST00000375618 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
C11orf88-202ENST00000375618 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 97.6 ms