RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 KRTAP19-3Q7Z4W3 81 aa5.75□□□□□ -1.49
SDHB-201ENST00000375499 SMIM26A0A096LP01 95 aa5.74□□□□□ -1.49
SDHB-201ENST00000375499 KRTAP19-5Q3LI72 72 aa5.73□□□□□ -1.49
SDHB-201ENST00000375499 KRTAP19-4Q3LI73 84 aa5.68□□□□□ -1.5
SDHB-201ENST00000375499 C10orf95Q9H7T3 257 aa5.67□□□□□ -1.5
SDHB-201ENST00000375499 PRR15LQ9BU68 103 aa5.65□□□□□ -1.5
SDHB-201ENST00000375499 LINC01558Q9Y6Z2 57 aa5.64□□□□□ -1.51
SDHB-201ENST00000375499 HMCN1Q96RW7 5635 aa5.62□□□□□ -1.51
SDHB-201ENST00000375499 LCE3AQ5TA76 89 aa5.61□□□□□ -1.51
SDHB-201ENST00000375499 MT1GP13640 62 aa5.57□□□□□ -1.52
SDHB-201ENST00000375499 MT1LQ93083 61 aa5.57□□□□□ -1.52
SDHB-201ENST00000375499 AHNAK2Q8IVF2 5795 aa5.55□□□□□ -1.52
SDHB-201ENST00000375499 TNP1P09430 55 aa5.55□□□□□ -1.52
SDHB-201ENST00000375499 MT1MQ8N339 61 aa5.54□□□□□ -1.52
SDHB-201ENST00000375499 V9GYY9 64 aa5.54□□□□□ -1.52
SDHB-201ENST00000375499 KRTAP5-10Q6L8G5 202 aa5.52□□□□□ -1.53
SDHB-201ENST00000375499 MT4P47944 62 aa5.51□□□□□ -1.53
SDHB-201ENST00000375499 RPS28P62857 69 aaKnown RBP5.51□□□□□ -1.53
SDHB-201ENST00000375499 Q1T7F1 81 aa5.49□□□□□ -1.53
SDHB-201ENST00000375499 PP632Q6XCG6 107 aa5.49□□□□□ -1.53
SDHB-201ENST00000375499 KRTAP4-3Q9BYR4 195 aa5.46□□□□□ -1.54
SDHB-201ENST00000375499 UQCR11O14957 56 aa5.45□□□□□ -1.54
SDHB-201ENST00000375499 KRTAP5-7Q6L8G8 165 aa5.41□□□□□ -1.54
SDHB-201ENST00000375499 PSPHP1O15172 72 aa5.4□□□□□ -1.54
SDHB-201ENST00000375499 KRTAP5-4Q6L8H1 288 aa5.38□□□□□ -1.55
SDHB-201ENST00000375499 KRTAP12-3P60328 96 aa5.35□□□□□ -1.55
SDHB-201ENST00000375499 MIR22HGQ0VDD5 57 aa5.35□□□□□ -1.55
SDHB-201ENST00000375499 SPRR5A0A1B0GTR4 108 aa5.28□□□□□ -1.56
SDHB-201ENST00000375499 A6NED7 52 aa5.27□□□□□ -1.57
SDHB-201ENST00000375499 KRTAP25-1Q3LHN0 102 aa5.24□□□□□ -1.57
SDHB-201ENST00000375499 K7ERS5 55 aa5.23□□□□□ -1.57
SDHB-201ENST00000375499 KRTAP5-5Q701N2 237 aaPredicted RBP5.1□□□□□ -1.59
SDHB-201ENST00000375499 CDC42SE1Q9NRR8 79 aa5.09□□□□□ -1.59
SDHB-201ENST00000375499 KRTAP20-2Q3LI61 65 aa5.08□□□□□ -1.6
SDHB-201ENST00000375499 KRTAP23-1A1A580 65 aa5.03□□□□□ -1.6
SDHB-201ENST00000375499 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
SDHB-201ENST00000375499 KRTAP12-4P60329 112 aa4.99□□□□□ -1.61
SDHB-201ENST00000375499 SYNE1Q8NF91 8797 aaKnown RBP4.96□□□□□ -1.62
SDHB-201ENST00000375499 LCE3CQ5T5A8 94 aa4.92□□□□□ -1.62
SDHB-201ENST00000375499 ROMO1P60602 79 aa4.89□□□□□ -1.63
SDHB-201ENST00000375499 BRK1Q8WUW1 75 aa4.88□□□□□ -1.63
SDHB-201ENST00000375499 AHNAKQ09666 5890 aaKnown RBP4.82□□□□□ -1.64
SDHB-201ENST00000375499 MUC5ACP98088 5654 aa4.75□□□□□ -1.65
SDHB-201ENST00000375499 KRTAP9-6A8MVA2 160 aa4.74□□□□□ -1.65
SDHB-201ENST00000375499 KRTAP6-1Q3LI64 71 aa4.73□□□□□ -1.65
SDHB-201ENST00000375499 MT1AP04731 61 aa4.72□□□□□ -1.65
SDHB-201ENST00000375499 MUC5BQ9HC84 5762 aaPredicted RBP4.68□□□□□ -1.66
SDHB-201ENST00000375499 PMAIP1Q13794 54 aa4.63□□□□□ -1.67
SDHB-201ENST00000375499 KRTAP5-2Q701N4 177 aa4.63□□□□□ -1.67
SDHB-201ENST00000375499 KRTAP5-8O75690 187 aa4.61□□□□□ -1.67
SDHB-201ENST00000375499 PRO0628Q9UI54 55 aa4.56□□□□□ -1.68
SDHB-201ENST00000375499 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.54□□□□□ -1.68
SDHB-201ENST00000375499 KRTAP6-2Q3LI66 62 aa4.49□□□□□ -1.69
SDHB-201ENST00000375499 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
SDHB-201ENST00000375499 PRAC1Q96KF2 57 aa4.31□□□□□ -1.72
SDHB-201ENST00000375499 MT3P25713 68 aa4.27□□□□□ -1.73
SDHB-201ENST00000375499 KTN1-AS1Q86SY8 53 aa4.27□□□□□ -1.73
SDHB-201ENST00000375499 KRTAP5-1Q6L8H4 278 aa4.22□□□□□ -1.73
SDHB-201ENST00000375499 KRTAP5-11Q6L8G4 156 aa4.06□□□□□ -1.76
SDHB-201ENST00000375499 SVIPQ8NHG7 77 aa4.05□□□□□ -1.76
SDHB-201ENST00000375499 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
SDHB-201ENST00000375499 KRTAP4-4Q9BYR3 166 aa3.81□□□□□ -1.8
SDHB-201ENST00000375499 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
SDHB-201ENST00000375499 LUZP6Q538Z0 58 aa3.68□□□□□ -1.82
SDHB-201ENST00000375499 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
SDHB-201ENST00000375499 LCE3DQ9BYE3 92 aa3.53□□□□□ -1.84
SDHB-201ENST00000375499 A0A0A0MQY5 61 aa3.47□□□□□ -1.85
SDHB-201ENST00000375499 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
SDHB-201ENST00000375499 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
SDHB-201ENST00000375499 PHGR1C9JFL3 82 aa3.27□□□□□ -1.89
SDHB-201ENST00000375499 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
SDHB-201ENST00000375499 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
SDHB-201ENST00000375499 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
SDHB-201ENST00000375499 INE1O15225 51 aa2.69□□□□□ -1.98
SDHB-201ENST00000375499 PRM1P04553 51 aa2.55□□□□□ -2
SDHB-201ENST00000375499 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
SDHB-201ENST00000375499 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 6.9 ms