RNA–Protein interactions for RNA: ENST00000374940.3

HLA-DQA2-210, Transcript of major histocompatibility complex, class II, DQ alpha 2, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA2, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2-210ENST00000374940 KRTAP10-12P60413 245 aa4.9□□□□□ -1.63
HLA-DQA2-210ENST00000374940 MUC12Q9UKN1 5478 aa4.88□□□□□ -1.63
HLA-DQA2-210ENST00000374940 KRTAP8-1Q8IUC2 63 aa4.87□□□□□ -1.63
HLA-DQA2-210ENST00000374940 NEBP20929 6669 aa4.84□□□□□ -1.63
HLA-DQA2-210ENST00000374940 MDN1Q9NU22 5596 aa4.8□□□□□ -1.64
HLA-DQA2-210ENST00000374940 SPRR2FQ96RM1 72 aa4.8□□□□□ -1.64
HLA-DQA2-210ENST00000374940 KRTAP20-1Q3LI63 56 aa4.79□□□□□ -1.64
HLA-DQA2-210ENST00000374940 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
HLA-DQA2-210ENST00000374940 KRTAP25-1Q3LHN0 102 aa4.71□□□□□ -1.66
HLA-DQA2-210ENST00000374940 C10orf95Q9H7T3 257 aa4.71□□□□□ -1.66
HLA-DQA2-210ENST00000374940 K7ERS5 55 aa4.68□□□□□ -1.66
HLA-DQA2-210ENST00000374940 TNP1P09430 55 aa4.67□□□□□ -1.66
HLA-DQA2-210ENST00000374940 SPRR2EP22531 72 aa4.67□□□□□ -1.66
HLA-DQA2-210ENST00000374940 SPRR2BP35325 72 aa4.67□□□□□ -1.66
HLA-DQA2-210ENST00000374940 SPRR2AP35326 72 aa4.67□□□□□ -1.66
HLA-DQA2-210ENST00000374940 LCE1AQ5T7P2 110 aa4.65□□□□□ -1.67
HLA-DQA2-210ENST00000374940 ROMO1P60602 79 aa4.62□□□□□ -1.67
HLA-DQA2-210ENST00000374940 KRTAP19-7Q3SYF9 63 aa4.6□□□□□ -1.67
HLA-DQA2-210ENST00000374940 MT1EP04732 61 aa4.55□□□□□ -1.68
HLA-DQA2-210ENST00000374940 LCE3AQ5TA76 89 aa4.55□□□□□ -1.68
HLA-DQA2-210ENST00000374940 NDUFAF8A1L188 74 aa4.54□□□□□ -1.68
HLA-DQA2-210ENST00000374940 KRTAP2-3P0C7H8 128 aa4.54□□□□□ -1.68
HLA-DQA2-210ENST00000374940 KRTAP2-4Q9BYR9 128 aa4.54□□□□□ -1.68
HLA-DQA2-210ENST00000374940 KRTAP19-5Q3LI72 72 aa4.53□□□□□ -1.68
HLA-DQA2-210ENST00000374940 SPRR2DP22532 72 aa4.52□□□□□ -1.69
HLA-DQA2-210ENST00000374940 KRTAP19-3Q7Z4W3 81 aa4.46□□□□□ -1.69
HLA-DQA2-210ENST00000374940 MT1GP13640 62 aa4.4□□□□□ -1.71
HLA-DQA2-210ENST00000374940 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
HLA-DQA2-210ENST00000374940 MT1LQ93083 61 aa4.38□□□□□ -1.71
HLA-DQA2-210ENST00000374940 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
HLA-DQA2-210ENST00000374940 KRTAP2-1Q9BYU5 128 aa4.38□□□□□ -1.71
HLA-DQA2-210ENST00000374940 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
HLA-DQA2-210ENST00000374940 MT3P25713 68 aa4.36□□□□□ -1.71
HLA-DQA2-210ENST00000374940 MT1MQ8N339 61 aa4.31□□□□□ -1.72
HLA-DQA2-210ENST00000374940 DSTQ03001 7570 aaKnown RBP4.29□□□□□ -1.72
HLA-DQA2-210ENST00000374940 GPR98Q8WXG9 6306 aa4.27□□□□□ -1.73
HLA-DQA2-210ENST00000374940 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
HLA-DQA2-210ENST00000374940 LCE3CQ5T5A8 94 aa4.06□□□□□ -1.76
HLA-DQA2-210ENST00000374940 KRTAP5-4Q6L8H1 288 aa3.99□□□□□ -1.77
HLA-DQA2-210ENST00000374940 MT4P47944 62 aa3.93□□□□□ -1.78
HLA-DQA2-210ENST00000374940 KRTAP5-5Q701N2 237 aaPredicted RBP3.93□□□□□ -1.78
HLA-DQA2-210ENST00000374940 HMCN1Q96RW7 5635 aa3.91□□□□□ -1.78
HLA-DQA2-210ENST00000374940 SPRR5A0A1B0GTR4 108 aa3.86□□□□□ -1.79
HLA-DQA2-210ENST00000374940 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
HLA-DQA2-210ENST00000374940 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
HLA-DQA2-210ENST00000374940 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
HLA-DQA2-210ENST00000374940 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
HLA-DQA2-210ENST00000374940 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
HLA-DQA2-210ENST00000374940 AHNAK2Q8IVF2 5795 aa3.76□□□□□ -1.81
HLA-DQA2-210ENST00000374940 MT1AP04731 61 aa3.74□□□□□ -1.81
HLA-DQA2-210ENST00000374940 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
HLA-DQA2-210ENST00000374940 KRTAP5-10Q6L8G5 202 aa3.72□□□□□ -1.81
HLA-DQA2-210ENST00000374940 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
HLA-DQA2-210ENST00000374940 KRTAP6-1Q3LI64 71 aa3.69□□□□□ -1.82
HLA-DQA2-210ENST00000374940 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
HLA-DQA2-210ENST00000374940 KRTAP5-7Q6L8G8 165 aa3.64□□□□□ -1.83
HLA-DQA2-210ENST00000374940 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
HLA-DQA2-210ENST00000374940 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
HLA-DQA2-210ENST00000374940 INE1O15225 51 aa3.49□□□□□ -1.85
HLA-DQA2-210ENST00000374940 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
HLA-DQA2-210ENST00000374940 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
HLA-DQA2-210ENST00000374940 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
HLA-DQA2-210ENST00000374940 KRTAP5-8O75690 187 aa3.24□□□□□ -1.89
HLA-DQA2-210ENST00000374940 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
HLA-DQA2-210ENST00000374940 MUC5ACP98088 5654 aa3.18□□□□□ -1.9
HLA-DQA2-210ENST00000374940 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
HLA-DQA2-210ENST00000374940 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
HLA-DQA2-210ENST00000374940 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
HLA-DQA2-210ENST00000374940 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
HLA-DQA2-210ENST00000374940 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
HLA-DQA2-210ENST00000374940 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
HLA-DQA2-210ENST00000374940 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
HLA-DQA2-210ENST00000374940 PRM1P04553 51 aa2.4□□□□□ -2.03
HLA-DQA2-210ENST00000374940 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
HLA-DQA2-210ENST00000374940 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
HLA-DQA2-210ENST00000374940 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
HLA-DQA2-210ENST00000374940 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 7.5 ms