RNA–Protein interactions for RNA: ENST00000374601.7

TCEA3-201, Transcript of transcription elongation factor A3, humanhuman

TSL 1 (best) BASIC

Gene TCEA3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-201ENST00000374601 MDN1Q9NU22 5596 aa5.1□□□□□ -1.59
TCEA3-201ENST00000374601 LCE1AQ5T7P2 110 aa5.09□□□□□ -1.59
TCEA3-201ENST00000374601 SPRR2EP22531 72 aa5.08□□□□□ -1.6
TCEA3-201ENST00000374601 SPRR2BP35325 72 aa5.08□□□□□ -1.6
TCEA3-201ENST00000374601 SPRR2AP35326 72 aa5.08□□□□□ -1.6
TCEA3-201ENST00000374601 PRAC1Q96KF2 57 aa5.04□□□□□ -1.6
TCEA3-201ENST00000374601 MT1LQ93083 61 aa5.03□□□□□ -1.6
TCEA3-201ENST00000374601 KRTAP2-2Q9BYT5 123 aa5.03□□□□□ -1.6
TCEA3-201ENST00000374601 KRTAP2-1Q9BYU5 128 aa5.03□□□□□ -1.6
TCEA3-201ENST00000374601 KRTAP19-3Q7Z4W3 81 aa5.02□□□□□ -1.61
TCEA3-201ENST00000374601 KTN1-AS1Q86SY8 53 aa4.99□□□□□ -1.61
TCEA3-201ENST00000374601 LCE5AQ5TCM9 118 aa4.98□□□□□ -1.61
TCEA3-201ENST00000374601 KRTAP15-1Q3LI76 137 aa4.94□□□□□ -1.62
TCEA3-201ENST00000374601 MT1GP13640 62 aa4.93□□□□□ -1.62
TCEA3-201ENST00000374601 SPRR2DP22532 72 aa4.9□□□□□ -1.63
TCEA3-201ENST00000374601 MT1MQ8N339 61 aa4.9□□□□□ -1.63
TCEA3-201ENST00000374601 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
TCEA3-201ENST00000374601 KRTAP4-6Q9BYQ5 205 aa4.87□□□□□ -1.63
TCEA3-201ENST00000374601 KRTAP4-7Q9BYR0 210 aa4.82□□□□□ -1.64
TCEA3-201ENST00000374601 KRTAP19-4Q3LI73 84 aa4.81□□□□□ -1.64
TCEA3-201ENST00000374601 KRTAP4-3Q9BYR4 195 aa4.79□□□□□ -1.64
TCEA3-201ENST00000374601 LCE3CQ5T5A8 94 aa4.77□□□□□ -1.65
TCEA3-201ENST00000374601 LCE3BQ5TA77 95 aa4.72□□□□□ -1.65
TCEA3-201ENST00000374601 SVIPQ8NHG7 77 aa4.7□□□□□ -1.66
TCEA3-201ENST00000374601 H3BS24 57 aa4.61□□□□□ -1.67
TCEA3-201ENST00000374601 DSTQ03001 7570 aaKnown RBP4.61□□□□□ -1.67
TCEA3-201ENST00000374601 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
TCEA3-201ENST00000374601 KRTAP4-9Q9BYQ8 210 aa4.53□□□□□ -1.68
TCEA3-201ENST00000374601 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
TCEA3-201ENST00000374601 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
TCEA3-201ENST00000374601 KRTAP5-10Q6L8G5 202 aa4.45□□□□□ -1.7
TCEA3-201ENST00000374601 AHNAK2Q8IVF2 5795 aa4.44□□□□□ -1.7
TCEA3-201ENST00000374601 KRTAP5-7Q6L8G8 165 aa4.39□□□□□ -1.71
TCEA3-201ENST00000374601 KRTAP5-4Q6L8H1 288 aa4.39□□□□□ -1.71
TCEA3-201ENST00000374601 HMCN1Q96RW7 5635 aa4.38□□□□□ -1.71
TCEA3-201ENST00000374601 LCE4AQ5TA78 99 aa4.35□□□□□ -1.71
TCEA3-201ENST00000374601 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
TCEA3-201ENST00000374601 MT1AP04731 61 aa4.28□□□□□ -1.72
TCEA3-201ENST00000374601 MT4P47944 62 aa4.25□□□□□ -1.73
TCEA3-201ENST00000374601 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
TCEA3-201ENST00000374601 SYNE1Q8NF91 8797 aaKnown RBP4.18□□□□□ -1.74
TCEA3-201ENST00000374601 KRTAP12-4P60329 112 aa4.15□□□□□ -1.75
TCEA3-201ENST00000374601 KRTAP5-3Q6L8H2 238 aa4.14□□□□□ -1.75
TCEA3-201ENST00000374601 KRTAP4-12Q9BQ66 201 aa4.14□□□□□ -1.75
TCEA3-201ENST00000374601 KRTAP20-2Q3LI61 65 aa4.11□□□□□ -1.75
TCEA3-201ENST00000374601 KRTAP9-9Q9BYP9 154 aa4.1□□□□□ -1.75
TCEA3-201ENST00000374601 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
TCEA3-201ENST00000374601 LUZP6Q538Z0 58 aa4.08□□□□□ -1.76
TCEA3-201ENST00000374601 AHNAKQ09666 5890 aaKnown RBP3.96□□□□□ -1.78
TCEA3-201ENST00000374601 KRTAP6-2Q3LI66 62 aa3.95□□□□□ -1.78
TCEA3-201ENST00000374601 KRTAP5-2Q701N4 177 aa3.94□□□□□ -1.78
TCEA3-201ENST00000374601 MT3P25713 68 aa3.85□□□□□ -1.79
TCEA3-201ENST00000374601 MUC5ACP98088 5654 aa3.84□□□□□ -1.8
TCEA3-201ENST00000374601 NDUFAF8A1L188 74 aa3.8□□□□□ -1.8
TCEA3-201ENST00000374601 MUC5BQ9HC84 5762 aaPredicted RBP3.78□□□□□ -1.8
TCEA3-201ENST00000374601 KRTAP4-2Q9BYR5 136 aa3.77□□□□□ -1.81
TCEA3-201ENST00000374601 KRTAP4-11Q9BYQ6 195 aa3.66□□□□□ -1.82
TCEA3-201ENST00000374601 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
TCEA3-201ENST00000374601 KRTAP5-8O75690 187 aa3.55□□□□□ -1.84
TCEA3-201ENST00000374601 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
TCEA3-201ENST00000374601 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
TCEA3-201ENST00000374601 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
TCEA3-201ENST00000374601 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
TCEA3-201ENST00000374601 A0A0A0MQY5 61 aa3.22□□□□□ -1.89
TCEA3-201ENST00000374601 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
TCEA3-201ENST00000374601 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
TCEA3-201ENST00000374601 INE1O15225 51 aa3.11□□□□□ -1.91
TCEA3-201ENST00000374601 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
TCEA3-201ENST00000374601 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
TCEA3-201ENST00000374601 PRM1P04553 51 aa2.83□□□□□ -1.96
TCEA3-201ENST00000374601 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
TCEA3-201ENST00000374601 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
TCEA3-201ENST00000374601 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
TCEA3-201ENST00000374601 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
TCEA3-201ENST00000374601 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
TCEA3-201ENST00000374601 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
TCEA3-201ENST00000374601 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms