RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 KRTAP9-7A8MTY7 169 aa6.02□□□□□ -1.45
HDAC8-209ENST00000373589 KRTAP15-1Q3LI76 137 aa5.97□□□□□ -1.45
HDAC8-209ENST00000373589 FCGBPQ9Y6R7 5405 aaPredicted RBP5.96□□□□□ -1.45
HDAC8-209ENST00000373589 KRTAP12-3P60328 96 aa5.95□□□□□ -1.46
HDAC8-209ENST00000373589 CRCT1Q9UGL9 99 aa5.94□□□□□ -1.46
HDAC8-209ENST00000373589 KRTAP19-5Q3LI72 72 aa5.88□□□□□ -1.47
HDAC8-209ENST00000373589 A0A0A0MQY5 61 aa5.84□□□□□ -1.47
HDAC8-209ENST00000373589 KRTAP19-4Q3LI73 84 aa5.81□□□□□ -1.48
HDAC8-209ENST00000373589 KRTAP19-7Q3SYF9 63 aa5.79□□□□□ -1.48
HDAC8-209ENST00000373589 SPRR5A0A1B0GTR4 108 aa5.74□□□□□ -1.49
HDAC8-209ENST00000373589 MT1EP04732 61 aa5.67□□□□□ -1.5
HDAC8-209ENST00000373589 MACF1Q9UPN3 7388 aaKnown RBP5.65□□□□□ -1.5
HDAC8-209ENST00000373589 MT1LQ93083 61 aa5.58□□□□□ -1.52
HDAC8-209ENST00000373589 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
HDAC8-209ENST00000373589 MUC12Q9UKN1 5478 aa5.55□□□□□ -1.52
HDAC8-209ENST00000373589 LUZP6Q538Z0 58 aa5.54□□□□□ -1.52
HDAC8-209ENST00000373589 NDUFAF8A1L188 74 aa5.54□□□□□ -1.52
HDAC8-209ENST00000373589 SYNE2Q8WXH0 6885 aaKnown RBP5.49□□□□□ -1.53
HDAC8-209ENST00000373589 SPRR2FQ96RM1 72 aa5.44□□□□□ -1.54
HDAC8-209ENST00000373589 KRTAP19-3Q7Z4W3 81 aa5.42□□□□□ -1.54
HDAC8-209ENST00000373589 MT1GP13640 62 aa5.37□□□□□ -1.55
HDAC8-209ENST00000373589 KRTAP5-9P26371 169 aa5.37□□□□□ -1.55
HDAC8-209ENST00000373589 MDN1Q9NU22 5596 aa5.35□□□□□ -1.55
HDAC8-209ENST00000373589 MT1MQ8N339 61 aa5.32□□□□□ -1.56
HDAC8-209ENST00000373589 KRTAP9-6A8MVA2 160 aa5.31□□□□□ -1.56
HDAC8-209ENST00000373589 KRTAP4-3Q9BYR4 195 aa5.24□□□□□ -1.57
HDAC8-209ENST00000373589 LCE1AQ5T7P2 110 aa5.21□□□□□ -1.58
HDAC8-209ENST00000373589 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.2□□□□□ -1.58
HDAC8-209ENST00000373589 KRTAP6-3Q3LI67 103 aa5.2□□□□□ -1.58
HDAC8-209ENST00000373589 SPRR2EP22531 72 aa5.12□□□□□ -1.59
HDAC8-209ENST00000373589 SPRR2BP35325 72 aa5.12□□□□□ -1.59
HDAC8-209ENST00000373589 SPRR2AP35326 72 aa5.12□□□□□ -1.59
HDAC8-209ENST00000373589 DSTQ03001 7570 aaKnown RBP5.09□□□□□ -1.59
HDAC8-209ENST00000373589 NEBP20929 6669 aa4.98□□□□□ -1.61
HDAC8-209ENST00000373589 KRTAP2-3P0C7H8 128 aa4.95□□□□□ -1.62
HDAC8-209ENST00000373589 KRTAP2-4Q9BYR9 128 aa4.95□□□□□ -1.62
HDAC8-209ENST00000373589 KRTAP2-1Q9BYU5 128 aa4.95□□□□□ -1.62
HDAC8-209ENST00000373589 SPRR2DP22532 72 aa4.93□□□□□ -1.62
HDAC8-209ENST00000373589 KRTAP20-1Q3LI63 56 aa4.88□□□□□ -1.63
HDAC8-209ENST00000373589 KRTAP5-5Q701N2 237 aaPredicted RBP4.81□□□□□ -1.64
HDAC8-209ENST00000373589 MT1AP04731 61 aa4.72□□□□□ -1.65
HDAC8-209ENST00000373589 KRTAP6-1Q3LI64 71 aa4.7□□□□□ -1.66
HDAC8-209ENST00000373589 KRTAP5-11Q6L8G4 156 aa4.66□□□□□ -1.66
HDAC8-209ENST00000373589 SYNE1Q8NF91 8797 aaKnown RBP4.62□□□□□ -1.67
HDAC8-209ENST00000373589 INE1O15225 51 aa4.55□□□□□ -1.68
HDAC8-209ENST00000373589 KRTAP5-4Q6L8H1 288 aa4.53□□□□□ -1.68
HDAC8-209ENST00000373589 KRTAP2-2Q9BYT5 123 aa4.43□□□□□ -1.7
HDAC8-209ENST00000373589 GPR98Q8WXG9 6306 aa4.41□□□□□ -1.7
HDAC8-209ENST00000373589 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
HDAC8-209ENST00000373589 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
HDAC8-209ENST00000373589 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
HDAC8-209ENST00000373589 MT4P47944 62 aa4.28□□□□□ -1.72
HDAC8-209ENST00000373589 HMCN1Q96RW7 5635 aa4.28□□□□□ -1.72
HDAC8-209ENST00000373589 KRTAP4-4Q9BYR3 166 aa4.27□□□□□ -1.73
HDAC8-209ENST00000373589 MT3P25713 68 aa4.26□□□□□ -1.73
HDAC8-209ENST00000373589 KRTAP20-2Q3LI61 65 aa4.21□□□□□ -1.73
HDAC8-209ENST00000373589 LCE3DQ9BYE3 92 aa4.2□□□□□ -1.74
HDAC8-209ENST00000373589 KRTAP5-2Q701N4 177 aa4.13□□□□□ -1.75
HDAC8-209ENST00000373589 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
HDAC8-209ENST00000373589 LCE3EQ5T5B0 92 aa4.09□□□□□ -1.75
HDAC8-209ENST00000373589 OBSCNQ5VST9 7968 aa3.98□□□□□ -1.77
HDAC8-209ENST00000373589 AHNAK2Q8IVF2 5795 aa3.91□□□□□ -1.78
HDAC8-209ENST00000373589 KRTAP5-10Q6L8G5 202 aa3.9□□□□□ -1.79
HDAC8-209ENST00000373589 KRTAP5-7Q6L8G8 165 aa3.8□□□□□ -1.8
HDAC8-209ENST00000373589 PRM1P04553 51 aa3.64□□□□□ -1.83
HDAC8-209ENST00000373589 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
HDAC8-209ENST00000373589 KRTAP5-8O75690 187 aa3.49□□□□□ -1.85
HDAC8-209ENST00000373589 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
HDAC8-209ENST00000373589 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
HDAC8-209ENST00000373589 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.87
HDAC8-209ENST00000373589 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
HDAC8-209ENST00000373589 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
HDAC8-209ENST00000373589 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
HDAC8-209ENST00000373589 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
HDAC8-209ENST00000373589 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
HDAC8-209ENST00000373589 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
HDAC8-209ENST00000373589 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 47.3 ms