RNA–Protein interactions for RNA: ENST00000373157.8

COL6A5-203, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 2

Gene COL6A5, Length 1,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-203ENST00000373157 TENM3Q9P273 2699 aa0.94□□□□□ -2.26
COL6A5-203ENST00000373157 PRKDCP78527 4128 aaKnown RBP0.94□□□□□ -2.26
COL6A5-203ENST00000373157 PLECQ15149 4684 aaKnown RBP0.93□□□□□ -2.26
COL6A5-203ENST00000373157 TENM1Q9UKZ4 2725 aa0.93□□□□□ -2.26
COL6A5-203ENST00000373157 HSPG2P98160 4391 aa0.93□□□□□ -2.26
COL6A5-203ENST00000373157 FLGP20930 4061 aaPredicted RBP0.93□□□□□ -2.26
COL6A5-203ENST00000373157 RYR1P21817 5038 aa0.92□□□□□ -2.26
COL6A5-203ENST00000373157 DNAH5Q8TE73 4624 aa0.92□□□□□ -2.26
COL6A5-203ENST00000373157 RPS29P62273 56 aaKnown RBP0.92□□□□□ -2.26
COL6A5-203ENST00000373157 FAT2Q9NYQ8 4349 aa0.92□□□□□ -2.26
COL6A5-203ENST00000373157 LRP1Q07954 4544 aaKnown RBP0.91□□□□□ -2.26
COL6A5-203ENST00000373157 PRM1P04553 51 aa0.91□□□□□ -2.26
COL6A5-203ENST00000373157 RYR3Q15413 4870 aa0.9□□□□□ -2.27
COL6A5-203ENST00000373157 HYDINQ4G0P3 5121 aa0.89□□□□□ -2.27
COL6A5-203ENST00000373157 NEBP20929 6669 aa0.89□□□□□ -2.27
COL6A5-203ENST00000373157 KRTAP8-1Q8IUC2 63 aa0.89□□□□□ -2.27
COL6A5-203ENST00000373157 BIRC6Q9NR09 4857 aa0.89□□□□□ -2.27
COL6A5-203ENST00000373157 KMT2CQ8NEZ4 4911 aaKnown RBP0.89□□□□□ -2.27
COL6A5-203ENST00000373157 DYNC1H1Q14204 4646 aaKnown RBP0.89□□□□□ -2.27
COL6A5-203ENST00000373157 NSD1Q96L73 2696 aaPredicted RBP0.88□□□□□ -2.27
COL6A5-203ENST00000373157 EPPK1P58107 5090 aaKnown RBP0.87□□□□□ -2.27
COL6A5-203ENST00000373157 TNXBP22105 4242 aa0.87□□□□□ -2.27
COL6A5-203ENST00000373157 FSIP2Q5CZC0 6907 aa0.86□□□□□ -2.27
COL6A5-203ENST00000373157 RYR2Q92736 4967 aa0.86□□□□□ -2.27
COL6A5-203ENST00000373157 MGAM2Q2M2H8 2515 aa0.86□□□□□ -2.27
COL6A5-203ENST00000373157 LPAP08519 4548 aa0.85□□□□□ -2.27
COL6A5-203ENST00000373157 PKHD1P08F94 4074 aa0.85□□□□□ -2.27
COL6A5-203ENST00000373157 FAT1Q14517 4588 aa0.85□□□□□ -2.27
COL6A5-203ENST00000373157 DSTQ03001 7570 aaKnown RBP0.85□□□□□ -2.27
COL6A5-203ENST00000373157 KRTAP20-1Q3LI63 56 aa0.84□□□□□ -2.27
COL6A5-203ENST00000373157 KRTAP19-3Q7Z4W3 81 aa0.84□□□□□ -2.27
COL6A5-203ENST00000373157 SMR3BP02814 79 aaPredicted RBP0.83□□□□□ -2.28
COL6A5-203ENST00000373157 MUC17Q685J3 4493 aa0.83□□□□□ -2.28
COL6A5-203ENST00000373157 HERC1Q15751 4861 aa0.82□□□□□ -2.28
COL6A5-203ENST00000373157 ABCA13Q86UQ4 5058 aa0.82□□□□□ -2.28
COL6A5-203ENST00000373157 STARD9Q9P2P6 4700 aa0.82□□□□□ -2.28
COL6A5-203ENST00000373157 HERC2O95714 4834 aa0.82□□□□□ -2.28
COL6A5-203ENST00000373157 LRP1BQ9NZR2 4599 aa0.81□□□□□ -2.28
COL6A5-203ENST00000373157 KRTAP19-5Q3LI72 72 aa0.79□□□□□ -2.28
COL6A5-203ENST00000373157 SPRR2DP22532 72 aa0.78□□□□□ -2.28
COL6A5-203ENST00000373157 KMT2DO14686 5537 aa0.77□□□□□ -2.29
COL6A5-203ENST00000373157 SPRR2BP35325 72 aa0.77□□□□□ -2.29
COL6A5-203ENST00000373157 SYNE1Q8NF91 8797 aaKnown RBP0.77□□□□□ -2.29
COL6A5-203ENST00000373157 MDN1Q9NU22 5596 aa0.76□□□□□ -2.29
COL6A5-203ENST00000373157 FAT4Q6V0I7 4981 aa0.75□□□□□ -2.29
COL6A5-203ENST00000373157 MT1AP04731 61 aa0.75□□□□□ -2.29
COL6A5-203ENST00000373157 SSPOA2VEC9 5147 aa0.75□□□□□ -2.29
COL6A5-203ENST00000373157 SPRR2AP35326 72 aa0.73□□□□□ -2.29
COL6A5-203ENST00000373157 LRP2P98164 4655 aa0.72□□□□□ -2.29
COL6A5-203ENST00000373157 RNF213Q63HN8 5207 aa0.71□□□□□ -2.3
COL6A5-203ENST00000373157 KRTAP19-2Q3LHN2 52 aa0.7□□□□□ -2.3
COL6A5-203ENST00000373157 KRTAP6-2Q3LI66 62 aa0.69□□□□□ -2.3
COL6A5-203ENST00000373157 SPRR2GQ9BYE4 73 aa0.69□□□□□ -2.3
COL6A5-203ENST00000373157 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
COL6A5-203ENST00000373157 MT1XP80297 61 aa0.66□□□□□ -2.3
COL6A5-203ENST00000373157 SPRR2FQ96RM1 72 aa0.66□□□□□ -2.3
COL6A5-203ENST00000373157 HMCN2Q8NDA2 5059 aa0.65□□□□□ -2.3
COL6A5-203ENST00000373157 SPRR2EP22531 72 aa0.65□□□□□ -2.31
COL6A5-203ENST00000373157 KRTAP5-10Q6L8G5 202 aa0.65□□□□□ -2.31
COL6A5-203ENST00000373157 MT1EP04732 61 aa0.62□□□□□ -2.31
COL6A5-203ENST00000373157 KRTAP19-8Q3LI54 63 aa0.62□□□□□ -2.31
COL6A5-203ENST00000373157 MT1LQ93083 61 aa0.6□□□□□ -2.31
COL6A5-203ENST00000373157 MT1BP07438 61 aa0.6□□□□□ -2.31
COL6A5-203ENST00000373157 KRTAP19-7Q3SYF9 63 aa0.6□□□□□ -2.31
COL6A5-203ENST00000373157 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
COL6A5-203ENST00000373157 MT1GP13640 62 aa0.55□□□□□ -2.32
COL6A5-203ENST00000373157 MT1HP80294 61 aa0.55□□□□□ -2.32
COL6A5-203ENST00000373157 MUC12Q9UKN1 5478 aa0.55□□□□□ -2.32
COL6A5-203ENST00000373157 MT1HL1P0DM35 61 aa0.55□□□□□ -2.32
COL6A5-203ENST00000373157 USH2AO75445 5202 aa0.55□□□□□ -2.32
COL6A5-203ENST00000373157 MT1FP04733 61 aa0.52□□□□□ -2.33
COL6A5-203ENST00000373157 MT2AP02795 61 aa0.5□□□□□ -2.33
COL6A5-203ENST00000373157 KRTAP6-1Q3LI64 71 aa0.5□□□□□ -2.33
COL6A5-203ENST00000373157 MT1MQ8N339 61 aa0.48□□□□□ -2.33
COL6A5-203ENST00000373157 PHGR1C9JFL3 82 aa0.42□□□□□ -2.34
COL6A5-203ENST00000373157 KRTAP19-6Q3LI70 58 aa0.42□□□□□ -2.34
COL6A5-203ENST00000373157 MT4P47944 62 aa0.37□□□□□ -2.35
COL6A5-203ENST00000373157 KRTAP20-2Q3LI61 65 aa0.28□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 75.3 ms