RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 MT1XP80297 61 aa4□□□□□ -1.77
TMEM254-201ENST00000372273 TNP1P09430 55 aa3.98□□□□□ -1.77
TMEM254-201ENST00000372273 MDN1Q9NU22 5596 aa3.95□□□□□ -1.78
TMEM254-201ENST00000372273 PRO2289Q9P1D8 64 aa3.91□□□□□ -1.78
TMEM254-201ENST00000372273 KRTAP23-1A1A580 65 aa3.9□□□□□ -1.78
TMEM254-201ENST00000372273 KRTAP4-11Q9BYQ6 195 aa3.89□□□□□ -1.79
TMEM254-201ENST00000372273 KRTAP10-7P60409 375 aaPredicted RBP3.86□□□□□ -1.79
TMEM254-201ENST00000372273 KRTAP6-3Q3LI67 103 aa3.85□□□□□ -1.79
TMEM254-201ENST00000372273 NEBP20929 6669 aa3.84□□□□□ -1.8
TMEM254-201ENST00000372273 KRTAP5-9P26371 169 aa3.76□□□□□ -1.81
TMEM254-201ENST00000372273 KRTAP10-12P60413 245 aa3.75□□□□□ -1.81
TMEM254-201ENST00000372273 KRTAP8-1Q8IUC2 63 aa3.75□□□□□ -1.81
TMEM254-201ENST00000372273 SPRR2FQ96RM1 72 aa3.75□□□□□ -1.81
TMEM254-201ENST00000372273 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
TMEM254-201ENST00000372273 SPRR2EP22531 72 aa3.63□□□□□ -1.83
TMEM254-201ENST00000372273 SPRR2BP35325 72 aa3.63□□□□□ -1.83
TMEM254-201ENST00000372273 SPRR2AP35326 72 aa3.63□□□□□ -1.83
TMEM254-201ENST00000372273 SPRR5A0A1B0GTR4 108 aa3.62□□□□□ -1.83
TMEM254-201ENST00000372273 DSTQ03001 7570 aaKnown RBP3.62□□□□□ -1.83
TMEM254-201ENST00000372273 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
TMEM254-201ENST00000372273 KRTAP19-7Q3SYF9 63 aa3.58□□□□□ -1.84
TMEM254-201ENST00000372273 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
TMEM254-201ENST00000372273 KRTAP19-5Q3LI72 72 aa3.54□□□□□ -1.84
TMEM254-201ENST00000372273 MT1EP04732 61 aa3.51□□□□□ -1.85
TMEM254-201ENST00000372273 INE1O15225 51 aa3.51□□□□□ -1.85
TMEM254-201ENST00000372273 KRTAP20-1Q3LI63 56 aa3.5□□□□□ -1.85
TMEM254-201ENST00000372273 SPRR2DP22532 72 aa3.5□□□□□ -1.85
TMEM254-201ENST00000372273 LCE5AQ5TCM9 118 aa3.44□□□□□ -1.86
TMEM254-201ENST00000372273 KRTAP2-3P0C7H8 128 aa3.43□□□□□ -1.86
TMEM254-201ENST00000372273 KRTAP19-3Q7Z4W3 81 aa3.43□□□□□ -1.86
TMEM254-201ENST00000372273 KRTAP2-4Q9BYR9 128 aa3.43□□□□□ -1.86
TMEM254-201ENST00000372273 MT1LQ93083 61 aa3.39□□□□□ -1.87
TMEM254-201ENST00000372273 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
TMEM254-201ENST00000372273 MT1GP13640 62 aa3.35□□□□□ -1.87
TMEM254-201ENST00000372273 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
TMEM254-201ENST00000372273 KRTAP2-2Q9BYT5 123 aa3.35□□□□□ -1.87
TMEM254-201ENST00000372273 KRTAP2-1Q9BYU5 128 aa3.35□□□□□ -1.87
TMEM254-201ENST00000372273 MT1MQ8N339 61 aa3.34□□□□□ -1.88
TMEM254-201ENST00000372273 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
TMEM254-201ENST00000372273 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
TMEM254-201ENST00000372273 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
TMEM254-201ENST00000372273 HMCN1Q96RW7 5635 aa3.15□□□□□ -1.91
TMEM254-201ENST00000372273 MT4P47944 62 aa3.11□□□□□ -1.91
TMEM254-201ENST00000372273 SYNE1Q8NF91 8797 aaKnown RBP3.06□□□□□ -1.92
TMEM254-201ENST00000372273 KRTAP5-4Q6L8H1 288 aa3.05□□□□□ -1.92
TMEM254-201ENST00000372273 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
TMEM254-201ENST00000372273 LCE4AQ5TA78 99 aa3.02□□□□□ -1.93
TMEM254-201ENST00000372273 GPR98Q8WXG9 6306 aa2.97□□□□□ -1.93
TMEM254-201ENST00000372273 AHNAK2Q8IVF2 5795 aa2.91□□□□□ -1.94
TMEM254-201ENST00000372273 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
TMEM254-201ENST00000372273 KRTAP20-2Q3LI61 65 aa2.89□□□□□ -1.95
TMEM254-201ENST00000372273 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
TMEM254-201ENST00000372273 KRTAP12-4P60329 112 aa2.88□□□□□ -1.95
TMEM254-201ENST00000372273 MT1AP04731 61 aa2.84□□□□□ -1.95
TMEM254-201ENST00000372273 KRTAP5-10Q6L8G5 202 aa2.75□□□□□ -1.97
TMEM254-201ENST00000372273 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
TMEM254-201ENST00000372273 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
TMEM254-201ENST00000372273 MT3P25713 68 aa2.59□□□□□ -1.99
TMEM254-201ENST00000372273 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
TMEM254-201ENST00000372273 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
TMEM254-201ENST00000372273 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
TMEM254-201ENST00000372273 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
TMEM254-201ENST00000372273 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
TMEM254-201ENST00000372273 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2.01
TMEM254-201ENST00000372273 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
TMEM254-201ENST00000372273 MUC5BQ9HC84 5762 aaPredicted RBP2.43□□□□□ -2.02
TMEM254-201ENST00000372273 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
TMEM254-201ENST00000372273 PRM1P04553 51 aa2.34□□□□□ -2.03
TMEM254-201ENST00000372273 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
TMEM254-201ENST00000372273 LCE1EQ5T753 118 aa2.31□□□□□ -2.04
TMEM254-201ENST00000372273 LCE1BQ5T7P3 118 aa2.27□□□□□ -2.05
TMEM254-201ENST00000372273 LCE1FQ5T754 118 aa2.19□□□□□ -2.06
TMEM254-201ENST00000372273 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
TMEM254-201ENST00000372273 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
TMEM254-201ENST00000372273 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
TMEM254-201ENST00000372273 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
TMEM254-201ENST00000372273 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
TMEM254-201ENST00000372273 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 34.2 ms