RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 SPRR2BP35325 72 aa4.23□□□□□ -1.73
COL5A1-202ENST00000371820 SPRR2AP35326 72 aa4.23□□□□□ -1.73
COL5A1-202ENST00000371820 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
COL5A1-202ENST00000371820 KRTAP8-1Q8IUC2 63 aa4.18□□□□□ -1.74
COL5A1-202ENST00000371820 LCE1AQ5T7P2 110 aa4.16□□□□□ -1.74
COL5A1-202ENST00000371820 KRTAP2-2Q9BYT5 123 aa4.13□□□□□ -1.75
COL5A1-202ENST00000371820 KRTAP2-1Q9BYU5 128 aa4.13□□□□□ -1.75
COL5A1-202ENST00000371820 SPRR2DP22532 72 aa4.09□□□□□ -1.75
COL5A1-202ENST00000371820 KRTAP4-8A0A0G2JLE6 195 aa4.08□□□□□ -1.76
COL5A1-202ENST00000371820 KRTAP10-12P60413 245 aa4.08□□□□□ -1.76
COL5A1-202ENST00000371820 KRTAP4-8Q9BYQ9 185 aa4.08□□□□□ -1.76
COL5A1-202ENST00000371820 KRTAP10-7P60409 375 aaPredicted RBP4.06□□□□□ -1.76
COL5A1-202ENST00000371820 LCE3AQ5TA76 89 aa4.03□□□□□ -1.76
COL5A1-202ENST00000371820 LCE3BQ5TA77 95 aa3.99□□□□□ -1.77
COL5A1-202ENST00000371820 KRTAP12-3P60328 96 aa3.94□□□□□ -1.78
COL5A1-202ENST00000371820 KRTAP19-4Q3LI73 84 aa3.94□□□□□ -1.78
COL5A1-202ENST00000371820 GPR98Q8WXG9 6306 aa3.89□□□□□ -1.79
COL5A1-202ENST00000371820 INE1O15225 51 aa3.89□□□□□ -1.79
COL5A1-202ENST00000371820 DSTQ03001 7570 aaKnown RBP3.87□□□□□ -1.79
COL5A1-202ENST00000371820 KRTAP19-7Q3SYF9 63 aa3.81□□□□□ -1.8
COL5A1-202ENST00000371820 MT1EP04732 61 aa3.79□□□□□ -1.8
COL5A1-202ENST00000371820 LCE5AQ5TCM9 118 aa3.79□□□□□ -1.8
COL5A1-202ENST00000371820 KRTAP19-3Q7Z4W3 81 aa3.78□□□□□ -1.8
COL5A1-202ENST00000371820 KRTAP4-9Q9BYQ8 210 aa3.75□□□□□ -1.81
COL5A1-202ENST00000371820 KRTAP19-5Q3LI72 72 aa3.72□□□□□ -1.81
COL5A1-202ENST00000371820 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
COL5A1-202ENST00000371820 MT1GP13640 62 aa3.71□□□□□ -1.82
COL5A1-202ENST00000371820 LCE1DQ5T752 114 aa3.66□□□□□ -1.82
COL5A1-202ENST00000371820 HMCN1Q96RW7 5635 aa3.63□□□□□ -1.83
COL5A1-202ENST00000371820 MT1LQ93083 61 aa3.62□□□□□ -1.83
COL5A1-202ENST00000371820 MT1MQ8N339 61 aa3.61□□□□□ -1.83
COL5A1-202ENST00000371820 LCE4AQ5TA78 99 aa3.6□□□□□ -1.83
COL5A1-202ENST00000371820 MT4P47944 62 aa3.58□□□□□ -1.84
COL5A1-202ENST00000371820 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
COL5A1-202ENST00000371820 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
COL5A1-202ENST00000371820 KRTAP5-10Q6L8G5 202 aa3.5□□□□□ -1.85
COL5A1-202ENST00000371820 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
COL5A1-202ENST00000371820 KRTAP4-6Q9BYQ5 205 aa3.47□□□□□ -1.85
COL5A1-202ENST00000371820 KRTAP4-7Q9BYR0 210 aa3.4□□□□□ -1.87
COL5A1-202ENST00000371820 KRTAP5-7Q6L8G8 165 aa3.38□□□□□ -1.87
COL5A1-202ENST00000371820 KRTAP5-3Q6L8H2 238 aa3.37□□□□□ -1.87
COL5A1-202ENST00000371820 KRTAP9-6A8MVA2 160 aa3.36□□□□□ -1.87
COL5A1-202ENST00000371820 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
COL5A1-202ENST00000371820 KRTAP5-5Q701N2 237 aaPredicted RBP3.31□□□□□ -1.88
COL5A1-202ENST00000371820 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
COL5A1-202ENST00000371820 LOC100996750A0A140TA64 210 aa3.22□□□□□ -1.89
COL5A1-202ENST00000371820 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
COL5A1-202ENST00000371820 MT1AP04731 61 aa3.11□□□□□ -1.91
COL5A1-202ENST00000371820 KRTAP4-11Q9BYQ6 195 aa3.08□□□□□ -1.92
COL5A1-202ENST00000371820 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
COL5A1-202ENST00000371820 KRTAP6-1Q3LI64 71 aa3.05□□□□□ -1.92
COL5A1-202ENST00000371820 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
COL5A1-202ENST00000371820 KRTAP9-4Q9BYQ2 154 aa2.99□□□□□ -1.93
COL5A1-202ENST00000371820 AHNAKQ09666 5890 aaKnown RBP2.98□□□□□ -1.93
COL5A1-202ENST00000371820 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
COL5A1-202ENST00000371820 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
COL5A1-202ENST00000371820 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
COL5A1-202ENST00000371820 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
COL5A1-202ENST00000371820 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
COL5A1-202ENST00000371820 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
COL5A1-202ENST00000371820 MT3P25713 68 aa2.86□□□□□ -1.95
COL5A1-202ENST00000371820 KRTAP9-9Q9BYP9 154 aa2.85□□□□□ -1.95
COL5A1-202ENST00000371820 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
COL5A1-202ENST00000371820 LCE1EQ5T753 118 aa2.63□□□□□ -1.99
COL5A1-202ENST00000371820 PRM1P04553 51 aa2.62□□□□□ -1.99
COL5A1-202ENST00000371820 KRTAP4-2Q9BYR5 136 aa2.47□□□□□ -2.01
COL5A1-202ENST00000371820 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
COL5A1-202ENST00000371820 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
COL5A1-202ENST00000371820 KRTAP4-12Q9BQ66 201 aa2.27□□□□□ -2.05
COL5A1-202ENST00000371820 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.06
COL5A1-202ENST00000371820 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
COL5A1-202ENST00000371820 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
COL5A1-202ENST00000371820 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
COL5A1-202ENST00000371820 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
COL5A1-202ENST00000371820 KRTAP4-4Q9BYR3 166 aa1.83□□□□□ -2.12
COL5A1-202ENST00000371820 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
COL5A1-202ENST00000371820 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
COL5A1-202ENST00000371820 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 84.6 ms