RNA–Protein interactions for RNA: ENST00000371558.6

UBE2A-202, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBE2A, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-202ENST00000371558 A0A0A0MQY5 61 aa5.45□□□□□ -1.54
UBE2A-202ENST00000371558 KRTAP8-1Q8IUC2 63 aa5.43□□□□□ -1.54
UBE2A-202ENST00000371558 KRTAP19-5Q3LI72 72 aa5.39□□□□□ -1.55
UBE2A-202ENST00000371558 KRTAP12-3P60328 96 aa5.37□□□□□ -1.55
UBE2A-202ENST00000371558 KRTAP15-1Q3LI76 137 aa5.35□□□□□ -1.55
UBE2A-202ENST00000371558 MUC12Q9UKN1 5478 aa5.35□□□□□ -1.55
UBE2A-202ENST00000371558 KRTAP19-7Q3SYF9 63 aa5.33□□□□□ -1.56
UBE2A-202ENST00000371558 KRTAP4-11Q9BYQ6 195 aa5.26□□□□□ -1.57
UBE2A-202ENST00000371558 MT1EP04732 61 aa5.24□□□□□ -1.57
UBE2A-202ENST00000371558 SPRR2FQ96RM1 72 aa5.24□□□□□ -1.57
UBE2A-202ENST00000371558 MDN1Q9NU22 5596 aa5.22□□□□□ -1.57
UBE2A-202ENST00000371558 KRTAP5-9P26371 169 aa5.15□□□□□ -1.58
UBE2A-202ENST00000371558 MT1LQ93083 61 aa5.12□□□□□ -1.59
UBE2A-202ENST00000371558 NDUFAF8A1L188 74 aa5.11□□□□□ -1.59
UBE2A-202ENST00000371558 KRTAP6-3Q3LI67 103 aa5.11□□□□□ -1.59
UBE2A-202ENST00000371558 KRTAP19-3Q7Z4W3 81 aa5.05□□□□□ -1.6
UBE2A-202ENST00000371558 KRTAP9-7A8MTY7 169 aa5.03□□□□□ -1.6
UBE2A-202ENST00000371558 LCE3CQ5T5A8 94 aa5□□□□□ -1.61
UBE2A-202ENST00000371558 LCE1AQ5T7P2 110 aa5□□□□□ -1.61
UBE2A-202ENST00000371558 SPRR2EP22531 72 aa4.99□□□□□ -1.61
UBE2A-202ENST00000371558 SPRR2BP35325 72 aa4.99□□□□□ -1.61
UBE2A-202ENST00000371558 SPRR2AP35326 72 aa4.99□□□□□ -1.61
UBE2A-202ENST00000371558 MT1GP13640 62 aa4.98□□□□□ -1.61
UBE2A-202ENST00000371558 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.61
UBE2A-202ENST00000371558 LUZP6Q538Z0 58 aa4.95□□□□□ -1.62
UBE2A-202ENST00000371558 MT1MQ8N339 61 aa4.95□□□□□ -1.62
UBE2A-202ENST00000371558 KRTAP19-4Q3LI73 84 aa4.93□□□□□ -1.62
UBE2A-202ENST00000371558 SPRR5A0A1B0GTR4 108 aa4.92□□□□□ -1.62
UBE2A-202ENST00000371558 NEBP20929 6669 aa4.92□□□□□ -1.62
UBE2A-202ENST00000371558 DSTQ03001 7570 aaKnown RBP4.91□□□□□ -1.62
UBE2A-202ENST00000371558 KRTAP4-3Q9BYR4 195 aa4.9□□□□□ -1.63
UBE2A-202ENST00000371558 SPRR2DP22532 72 aa4.81□□□□□ -1.64
UBE2A-202ENST00000371558 LCE4AQ5TA78 99 aa4.79□□□□□ -1.64
UBE2A-202ENST00000371558 KRTAP9-6A8MVA2 160 aa4.75□□□□□ -1.65
UBE2A-202ENST00000371558 KRTAP2-3P0C7H8 128 aa4.49□□□□□ -1.69
UBE2A-202ENST00000371558 KRTAP2-4Q9BYR9 128 aa4.49□□□□□ -1.69
UBE2A-202ENST00000371558 KRTAP20-1Q3LI63 56 aa4.45□□□□□ -1.7
UBE2A-202ENST00000371558 KRTAP5-5Q701N2 237 aaPredicted RBP4.45□□□□□ -1.7
UBE2A-202ENST00000371558 KRTAP2-2Q9BYT5 123 aa4.39□□□□□ -1.71
UBE2A-202ENST00000371558 KRTAP2-1Q9BYU5 128 aa4.39□□□□□ -1.71
UBE2A-202ENST00000371558 SYNE1Q8NF91 8797 aaKnown RBP4.39□□□□□ -1.71
UBE2A-202ENST00000371558 MT1AP04731 61 aa4.34□□□□□ -1.71
UBE2A-202ENST00000371558 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.71
UBE2A-202ENST00000371558 KRTAP5-4Q6L8H1 288 aa4.28□□□□□ -1.72
UBE2A-202ENST00000371558 MT4P47944 62 aa4.21□□□□□ -1.74
UBE2A-202ENST00000371558 INE1O15225 51 aa4.2□□□□□ -1.74
UBE2A-202ENST00000371558 HMCN1Q96RW7 5635 aa4.2□□□□□ -1.74
UBE2A-202ENST00000371558 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.19□□□□□ -1.74
UBE2A-202ENST00000371558 KRTAP12-4P60329 112 aa4.16□□□□□ -1.74
UBE2A-202ENST00000371558 KRTAP20-2Q3LI61 65 aa4.03□□□□□ -1.76
UBE2A-202ENST00000371558 KRTAP6-2Q3LI66 62 aa4.01□□□□□ -1.77
UBE2A-202ENST00000371558 MT3P25713 68 aa3.94□□□□□ -1.78
UBE2A-202ENST00000371558 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
UBE2A-202ENST00000371558 KRTAP5-2Q701N4 177 aa3.86□□□□□ -1.79
UBE2A-202ENST00000371558 AHNAK2Q8IVF2 5795 aa3.75□□□□□ -1.81
UBE2A-202ENST00000371558 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
UBE2A-202ENST00000371558 LCE3EQ5T5B0 92 aa3.62□□□□□ -1.83
UBE2A-202ENST00000371558 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
UBE2A-202ENST00000371558 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
UBE2A-202ENST00000371558 GPR98Q8WXG9 6306 aa3.45□□□□□ -1.86
UBE2A-202ENST00000371558 KRTAP5-10Q6L8G5 202 aa3.45□□□□□ -1.86
UBE2A-202ENST00000371558 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
UBE2A-202ENST00000371558 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
UBE2A-202ENST00000371558 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
UBE2A-202ENST00000371558 KRTAP5-8O75690 187 aa3.38□□□□□ -1.87
UBE2A-202ENST00000371558 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
UBE2A-202ENST00000371558 KRTAP5-7Q6L8G8 165 aa3.22□□□□□ -1.89
UBE2A-202ENST00000371558 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
UBE2A-202ENST00000371558 PRM1P04553 51 aa3.15□□□□□ -1.91
UBE2A-202ENST00000371558 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
UBE2A-202ENST00000371558 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
UBE2A-202ENST00000371558 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
UBE2A-202ENST00000371558 LCE1FQ5T754 118 aa2.54□□□□□ -2
UBE2A-202ENST00000371558 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
UBE2A-202ENST00000371558 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
UBE2A-202ENST00000371558 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
UBE2A-202ENST00000371558 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 95.4 ms