RNA–Protein interactions for RNA: ENST00000371088.4

EFCAB7-201, Transcript of EF-hand calcium binding domain 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFCAB7, Length 2,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB7-201ENST00000371088 KRTAP10-7P60409 375 aaPredicted RBP3.31□□□□□ -1.88
EFCAB7-201ENST00000371088 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
EFCAB7-201ENST00000371088 KRTAP10-12P60413 245 aa3.24□□□□□ -1.89
EFCAB7-201ENST00000371088 KRTAP8-1Q8IUC2 63 aa3.24□□□□□ -1.89
EFCAB7-201ENST00000371088 KRTAP12-3P60328 96 aa3.2□□□□□ -1.9
EFCAB7-201ENST00000371088 PRO2289Q9P1D8 64 aa3.15□□□□□ -1.9
EFCAB7-201ENST00000371088 KRTAP19-5Q3LI72 72 aa3.13□□□□□ -1.91
EFCAB7-201ENST00000371088 FSIP2Q5CZC0 6907 aa3.13□□□□□ -1.91
EFCAB7-201ENST00000371088 SSPOA2VEC9 5147 aa3.06□□□□□ -1.92
EFCAB7-201ENST00000371088 INE1O15225 51 aa3.06□□□□□ -1.92
EFCAB7-201ENST00000371088 KRTAP9-6A8MVA2 160 aa3.01□□□□□ -1.93
EFCAB7-201ENST00000371088 LCE3CQ5T5A8 94 aa3.01□□□□□ -1.93
EFCAB7-201ENST00000371088 KRTAP19-7Q3SYF9 63 aa2.99□□□□□ -1.93
EFCAB7-201ENST00000371088 FCGBPQ9Y6R7 5405 aaPredicted RBP2.93□□□□□ -1.94
EFCAB7-201ENST00000371088 MUC12Q9UKN1 5478 aa2.91□□□□□ -1.94
EFCAB7-201ENST00000371088 MT1EP04732 61 aa2.88□□□□□ -1.95
EFCAB7-201ENST00000371088 MT1LQ93083 61 aa2.88□□□□□ -1.95
EFCAB7-201ENST00000371088 KRTAP4-3Q9BYR4 195 aa2.86□□□□□ -1.95
EFCAB7-201ENST00000371088 LCE1AQ5T7P2 110 aa2.82□□□□□ -1.96
EFCAB7-201ENST00000371088 KRTAP19-6Q3LI70 58 aa2.81□□□□□ -1.96
EFCAB7-201ENST00000371088 DSTQ03001 7570 aaKnown RBP2.81□□□□□ -1.96
EFCAB7-201ENST00000371088 KRTAP2-3P0C7H8 128 aa2.77□□□□□ -1.97
EFCAB7-201ENST00000371088 KRTAP2-4Q9BYR9 128 aa2.77□□□□□ -1.97
EFCAB7-201ENST00000371088 KRTAP2-1Q9BYU5 128 aa2.77□□□□□ -1.97
EFCAB7-201ENST00000371088 MT1GP13640 62 aa2.75□□□□□ -1.97
EFCAB7-201ENST00000371088 CRCT1Q9UGL9 99 aa2.75□□□□□ -1.97
EFCAB7-201ENST00000371088 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
EFCAB7-201ENST00000371088 MACF1Q9UPN3 7388 aaKnown RBP2.73□□□□□ -1.97
EFCAB7-201ENST00000371088 MT1MQ8N339 61 aa2.7□□□□□ -1.98
EFCAB7-201ENST00000371088 KRTAP5-9P26371 169 aa2.69□□□□□ -1.98
EFCAB7-201ENST00000371088 SYNE2Q8WXH0 6885 aaKnown RBP2.68□□□□□ -1.98
EFCAB7-201ENST00000371088 KRTAP19-3Q7Z4W3 81 aa2.68□□□□□ -1.98
EFCAB7-201ENST00000371088 MDN1Q9NU22 5596 aa2.65□□□□□ -1.99
EFCAB7-201ENST00000371088 SPRR2FQ96RM1 72 aa2.65□□□□□ -1.99
EFCAB7-201ENST00000371088 KRTAP2-2Q9BYT5 123 aa2.61□□□□□ -1.99
EFCAB7-201ENST00000371088 SYNE1Q8NF91 8797 aaKnown RBP2.61□□□□□ -1.99
EFCAB7-201ENST00000371088 MT3P25713 68 aa2.53□□□□□ -2
EFCAB7-201ENST00000371088 KRTAP6-1Q3LI64 71 aa2.49□□□□□ -2.01
EFCAB7-201ENST00000371088 KRTAP12-4P60329 112 aa2.48□□□□□ -2.01
EFCAB7-201ENST00000371088 OBSCNQ5VST9 7968 aa2.44□□□□□ -2.02
EFCAB7-201ENST00000371088 LCE1FQ5T754 118 aa2.4□□□□□ -2.02
EFCAB7-201ENST00000371088 SPRR2EP22531 72 aa2.39□□□□□ -2.03
EFCAB7-201ENST00000371088 SPRR2BP35325 72 aa2.39□□□□□ -2.03
EFCAB7-201ENST00000371088 SPRR2AP35326 72 aa2.39□□□□□ -2.03
EFCAB7-201ENST00000371088 MT1AP04731 61 aa2.37□□□□□ -2.03
EFCAB7-201ENST00000371088 KRTAP5-5Q701N2 237 aaPredicted RBP2.37□□□□□ -2.03
EFCAB7-201ENST00000371088 KRTAP5-4Q6L8H1 288 aa2.36□□□□□ -2.03
EFCAB7-201ENST00000371088 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.04
EFCAB7-201ENST00000371088 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
EFCAB7-201ENST00000371088 SPRR2DP22532 72 aa2.28□□□□□ -2.05
EFCAB7-201ENST00000371088 LCE3EQ5T5B0 92 aa2.25□□□□□ -2.05
EFCAB7-201ENST00000371088 LCE1EQ5T753 118 aa2.24□□□□□ -2.05
EFCAB7-201ENST00000371088 KRTAP6-2Q3LI66 62 aa2.23□□□□□ -2.05
EFCAB7-201ENST00000371088 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
EFCAB7-201ENST00000371088 PRM1P04553 51 aa2.22□□□□□ -2.05
EFCAB7-201ENST00000371088 KRTAP6-3Q3LI67 103 aa2.19□□□□□ -2.06
EFCAB7-201ENST00000371088 KRTAP5-8O75690 187 aa2.16□□□□□ -2.06
EFCAB7-201ENST00000371088 KRTAP5-2Q701N4 177 aa2.12□□□□□ -2.07
EFCAB7-201ENST00000371088 NEBP20929 6669 aa2.11□□□□□ -2.07
EFCAB7-201ENST00000371088 MT4P47944 62 aa2.08□□□□□ -2.08
EFCAB7-201ENST00000371088 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
EFCAB7-201ENST00000371088 KRTAP5-1Q6L8H4 278 aa2.05□□□□□ -2.08
EFCAB7-201ENST00000371088 KRTAP20-2Q3LI61 65 aa1.98□□□□□ -2.09
EFCAB7-201ENST00000371088 MUC5ACP98088 5654 aa1.9□□□□□ -2.1
EFCAB7-201ENST00000371088 KRTAP20-1Q3LI63 56 aa1.86□□□□□ -2.11
EFCAB7-201ENST00000371088 GPR98Q8WXG9 6306 aa1.82□□□□□ -2.12
EFCAB7-201ENST00000371088 LCE1BQ5T7P3 118 aa1.81□□□□□ -2.12
EFCAB7-201ENST00000371088 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.14
EFCAB7-201ENST00000371088 LCE1CQ5T751 118 aa1.62□□□□□ -2.15
EFCAB7-201ENST00000371088 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
EFCAB7-201ENST00000371088 AHNAK2Q8IVF2 5795 aa1.58□□□□□ -2.16
EFCAB7-201ENST00000371088 AHNAKQ09666 5890 aaKnown RBP1.56□□□□□ -2.16
EFCAB7-201ENST00000371088 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
EFCAB7-201ENST00000371088 KRTAP5-7Q6L8G8 165 aa1.46□□□□□ -2.18
EFCAB7-201ENST00000371088 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
EFCAB7-201ENST00000371088 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
EFCAB7-201ENST00000371088 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 54.7 ms