RNA–Protein interactions for RNA: ENST00000369220.8

CCNC-203, Transcript of cyclin C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCNC, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-203ENST00000369220 SPRR2EP22531 72 aa3.89□□□□□ -1.79
CCNC-203ENST00000369220 SPRR2BP35325 72 aa3.89□□□□□ -1.79
CCNC-203ENST00000369220 SPRR2AP35326 72 aa3.89□□□□□ -1.79
CCNC-203ENST00000369220 TNP1P09430 55 aa3.89□□□□□ -1.79
CCNC-203ENST00000369220 KRTAP19-7Q3SYF9 63 aa3.89□□□□□ -1.79
CCNC-203ENST00000369220 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
CCNC-203ENST00000369220 K7ERS5 55 aa3.88□□□□□ -1.79
CCNC-203ENST00000369220 LCE3AQ5TA76 89 aa3.86□□□□□ -1.79
CCNC-203ENST00000369220 KRTAP19-5Q3LI72 72 aa3.83□□□□□ -1.8
CCNC-203ENST00000369220 CDC42SE1Q9NRR8 79 aa3.83□□□□□ -1.8
CCNC-203ENST00000369220 DSTQ03001 7570 aaKnown RBP3.83□□□□□ -1.8
CCNC-203ENST00000369220 MT1EP04732 61 aa3.82□□□□□ -1.8
CCNC-203ENST00000369220 PRO0628Q9UI54 55 aa3.82□□□□□ -1.8
CCNC-203ENST00000369220 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
CCNC-203ENST00000369220 KRTAP25-1Q3LHN0 102 aa3.76□□□□□ -1.81
CCNC-203ENST00000369220 SPRR2DP22532 72 aa3.75□□□□□ -1.81
CCNC-203ENST00000369220 KRTAP20-1Q3LI63 56 aa3.74□□□□□ -1.81
CCNC-203ENST00000369220 KRTAP19-3Q7Z4W3 81 aa3.73□□□□□ -1.81
CCNC-203ENST00000369220 ROMO1P60602 79 aa3.7□□□□□ -1.82
CCNC-203ENST00000369220 KRTAP12-3P60328 96 aa3.69□□□□□ -1.82
CCNC-203ENST00000369220 BRK1Q8WUW1 75 aa3.68□□□□□ -1.82
CCNC-203ENST00000369220 MT1LQ93083 61 aa3.68□□□□□ -1.82
CCNC-203ENST00000369220 KRTAP2-3P0C7H8 128 aa3.68□□□□□ -1.82
CCNC-203ENST00000369220 KRTAP2-4Q9BYR9 128 aa3.68□□□□□ -1.82
CCNC-203ENST00000369220 PMAIP1Q13794 54 aa3.67□□□□□ -1.82
CCNC-203ENST00000369220 MT1GP13640 62 aa3.64□□□□□ -1.83
CCNC-203ENST00000369220 MT1MQ8N339 61 aa3.62□□□□□ -1.83
CCNC-203ENST00000369220 PP632Q6XCG6 107 aa3.59□□□□□ -1.83
CCNC-203ENST00000369220 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.83
CCNC-203ENST00000369220 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
CCNC-203ENST00000369220 KRTAP2-1Q9BYU5 128 aa3.58□□□□□ -1.84
CCNC-203ENST00000369220 PRAC1Q96KF2 57 aa3.56□□□□□ -1.84
CCNC-203ENST00000369220 KRTAP15-1Q3LI76 137 aa3.5□□□□□ -1.85
CCNC-203ENST00000369220 LCE3CQ5T5A8 94 aa3.41□□□□□ -1.86
CCNC-203ENST00000369220 KTN1-AS1Q86SY8 53 aa3.4□□□□□ -1.87
CCNC-203ENST00000369220 HMCN1Q96RW7 5635 aa3.38□□□□□ -1.87
CCNC-203ENST00000369220 KRTAP5-4Q6L8H1 288 aa3.31□□□□□ -1.88
CCNC-203ENST00000369220 MT4P47944 62 aa3.31□□□□□ -1.88
CCNC-203ENST00000369220 KRTAP5-5Q701N2 237 aaPredicted RBP3.31□□□□□ -1.88
CCNC-203ENST00000369220 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
CCNC-203ENST00000369220 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
CCNC-203ENST00000369220 SYNE1Q8NF91 8797 aaKnown RBP3.23□□□□□ -1.89
CCNC-203ENST00000369220 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
CCNC-203ENST00000369220 KRTAP6-1Q3LI64 71 aa3.13□□□□□ -1.91
CCNC-203ENST00000369220 KRTAP12-4P60329 112 aa3.12□□□□□ -1.91
CCNC-203ENST00000369220 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
CCNC-203ENST00000369220 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
CCNC-203ENST00000369220 MT1AP04731 61 aa3.11□□□□□ -1.91
CCNC-203ENST00000369220 AHNAK2Q8IVF2 5795 aa3.1□□□□□ -1.91
CCNC-203ENST00000369220 SPRR5A0A1B0GTR4 108 aa3.08□□□□□ -1.92
CCNC-203ENST00000369220 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
CCNC-203ENST00000369220 NDUFAF8A1L188 74 aa2.96□□□□□ -1.93
CCNC-203ENST00000369220 KRTAP6-2Q3LI66 62 aa2.95□□□□□ -1.94
CCNC-203ENST00000369220 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
CCNC-203ENST00000369220 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
CCNC-203ENST00000369220 MT3P25713 68 aa2.82□□□□□ -1.96
CCNC-203ENST00000369220 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
CCNC-203ENST00000369220 KRTAP5-7Q6L8G8 165 aa2.75□□□□□ -1.97
CCNC-203ENST00000369220 KRTAP5-8O75690 187 aa2.71□□□□□ -1.98
CCNC-203ENST00000369220 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
CCNC-203ENST00000369220 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
CCNC-203ENST00000369220 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
CCNC-203ENST00000369220 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
CCNC-203ENST00000369220 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -2
CCNC-203ENST00000369220 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
CCNC-203ENST00000369220 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
CCNC-203ENST00000369220 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
CCNC-203ENST00000369220 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
CCNC-203ENST00000369220 INE1O15225 51 aa2.38□□□□□ -2.03
CCNC-203ENST00000369220 LCE3EQ5T5B0 92 aa2.37□□□□□ -2.03
CCNC-203ENST00000369220 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
CCNC-203ENST00000369220 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
CCNC-203ENST00000369220 PRM1P04553 51 aa1.94□□□□□ -2.1
CCNC-203ENST00000369220 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
CCNC-203ENST00000369220 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
CCNC-203ENST00000369220 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
CCNC-203ENST00000369220 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 107 ms