RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 A0A0D9SG42 100 aa3.8□□□□□ -1.8
SNX27-201ENST00000368838 LCE1FQ5T754 118 aa3.8□□□□□ -1.8
SNX27-201ENST00000368838 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
SNX27-201ENST00000368838 SPINT4Q6UDR6 99 aa3.76□□□□□ -1.81
SNX27-201ENST00000368838 KRTAP25-1Q3LHN0 102 aa3.74□□□□□ -1.81
SNX27-201ENST00000368838 KRTAP10-5P60370 271 aa3.73□□□□□ -1.81
SNX27-201ENST00000368838 PLAC4Q8WY50 150 aa3.73□□□□□ -1.81
SNX27-201ENST00000368838 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
SNX27-201ENST00000368838 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
SNX27-201ENST00000368838 KMT2DO14686 5537 aa3.68□□□□□ -1.82
SNX27-201ENST00000368838 MDN1Q9NU22 5596 aa3.67□□□□□ -1.82
SNX27-201ENST00000368838 KRTAP5-9P26371 169 aa3.67□□□□□ -1.82
SNX27-201ENST00000368838 C10orf95Q9H7T3 257 aa3.65□□□□□ -1.83
SNX27-201ENST00000368838 PRO2289Q9P1D8 64 aa3.62□□□□□ -1.83
SNX27-201ENST00000368838 MT1XP80297 61 aa3.61□□□□□ -1.83
SNX27-201ENST00000368838 SPRR2FQ96RM1 72 aa3.59□□□□□ -1.83
SNX27-201ENST00000368838 TNP1P09430 55 aa3.57□□□□□ -1.84
SNX27-201ENST00000368838 SPRR2EP22531 72 aa3.57□□□□□ -1.84
SNX27-201ENST00000368838 SPRR2BP35325 72 aa3.57□□□□□ -1.84
SNX27-201ENST00000368838 SPRR2AP35326 72 aa3.57□□□□□ -1.84
SNX27-201ENST00000368838 KRTAP2-3P0C7H8 128 aa3.56□□□□□ -1.84
SNX27-201ENST00000368838 KRTAP2-4Q9BYR9 128 aa3.56□□□□□ -1.84
SNX27-201ENST00000368838 PP632Q6XCG6 107 aa3.54□□□□□ -1.84
SNX27-201ENST00000368838 KRTAP10-7P60409 375 aaPredicted RBP3.53□□□□□ -1.84
SNX27-201ENST00000368838 KRTAP10-12P60413 245 aa3.53□□□□□ -1.84
SNX27-201ENST00000368838 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
SNX27-201ENST00000368838 KRTAP8-1Q8IUC2 63 aa3.51□□□□□ -1.85
SNX27-201ENST00000368838 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
SNX27-201ENST00000368838 SPRR2DP22532 72 aa3.44□□□□□ -1.86
SNX27-201ENST00000368838 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
SNX27-201ENST00000368838 LCE3AQ5TA76 89 aa3.35□□□□□ -1.87
SNX27-201ENST00000368838 GPR98Q8WXG9 6306 aa3.32□□□□□ -1.88
SNX27-201ENST00000368838 DSTQ03001 7570 aaKnown RBP3.28□□□□□ -1.88
SNX27-201ENST00000368838 KRTAP12-3P60328 96 aa3.27□□□□□ -1.89
SNX27-201ENST00000368838 INE1O15225 51 aa3.25□□□□□ -1.89
SNX27-201ENST00000368838 KRTAP19-7Q3SYF9 63 aa3.24□□□□□ -1.89
SNX27-201ENST00000368838 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
SNX27-201ENST00000368838 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
SNX27-201ENST00000368838 KRTAP19-5Q3LI72 72 aa3.21□□□□□ -1.89
SNX27-201ENST00000368838 MT1EP04732 61 aa3.18□□□□□ -1.9
SNX27-201ENST00000368838 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
SNX27-201ENST00000368838 SPRR5A0A1B0GTR4 108 aa3.15□□□□□ -1.91
SNX27-201ENST00000368838 KRTAP19-3Q7Z4W3 81 aa3.13□□□□□ -1.91
SNX27-201ENST00000368838 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
SNX27-201ENST00000368838 MT1LQ93083 61 aa3.11□□□□□ -1.91
SNX27-201ENST00000368838 MT1GP13640 62 aa3.09□□□□□ -1.91
SNX27-201ENST00000368838 MT4P47944 62 aa3.06□□□□□ -1.92
SNX27-201ENST00000368838 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
SNX27-201ENST00000368838 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
SNX27-201ENST00000368838 AHNAK2Q8IVF2 5795 aa3.04□□□□□ -1.92
SNX27-201ENST00000368838 MT1MQ8N339 61 aa3.01□□□□□ -1.93
SNX27-201ENST00000368838 KRTAP4-3Q9BYR4 195 aa3.01□□□□□ -1.93
SNX27-201ENST00000368838 KRTAP9-6A8MVA2 160 aa2.9□□□□□ -1.95
SNX27-201ENST00000368838 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.95
SNX27-201ENST00000368838 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
SNX27-201ENST00000368838 SYNE1Q8NF91 8797 aaKnown RBP2.79□□□□□ -1.96
SNX27-201ENST00000368838 KRTAP5-7Q6L8G8 165 aa2.79□□□□□ -1.96
SNX27-201ENST00000368838 KRTAP20-2Q3LI61 65 aa2.78□□□□□ -1.96
SNX27-201ENST00000368838 KRTAP5-5Q701N2 237 aaPredicted RBP2.75□□□□□ -1.97
SNX27-201ENST00000368838 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
SNX27-201ENST00000368838 KRTAP12-4P60329 112 aa2.69□□□□□ -1.98
SNX27-201ENST00000368838 MT1AP04731 61 aa2.68□□□□□ -1.98
SNX27-201ENST00000368838 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
SNX27-201ENST00000368838 KRTAP6-1Q3LI64 71 aa2.58□□□□□ -2
SNX27-201ENST00000368838 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
SNX27-201ENST00000368838 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
SNX27-201ENST00000368838 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
SNX27-201ENST00000368838 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.01
SNX27-201ENST00000368838 KRTAP6-2Q3LI66 62 aa2.46□□□□□ -2.02
SNX27-201ENST00000368838 LCE1CQ5T751 118 aa2.1□□□□□ -2.07
SNX27-201ENST00000368838 LCE1BQ5T7P3 118 aa2.1□□□□□ -2.07
SNX27-201ENST00000368838 PRM1P04553 51 aa1.89□□□□□ -2.11
SNX27-201ENST00000368838 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.13
SNX27-201ENST00000368838 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
SNX27-201ENST00000368838 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
SNX27-201ENST00000368838 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
SNX27-201ENST00000368838 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 80.1 ms