RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 KRTAP20-1Q3LI63 56 aa4.79□□□□□ -1.64
EFNA1-201ENST00000368406 KRTAP2-3P0C7H8 128 aa4.72□□□□□ -1.65
EFNA1-201ENST00000368406 KRTAP4-7Q9BYR0 210 aa4.72□□□□□ -1.65
EFNA1-201ENST00000368406 KRTAP2-4Q9BYR9 128 aa4.72□□□□□ -1.65
EFNA1-201ENST00000368406 KRTAP19-5Q3LI72 72 aa4.72□□□□□ -1.65
EFNA1-201ENST00000368406 LCE1DQ5T752 114 aa4.71□□□□□ -1.66
EFNA1-201ENST00000368406 PMAIP1Q13794 54 aa4.7□□□□□ -1.66
EFNA1-201ENST00000368406 KRTAP19-7Q3SYF9 63 aa4.69□□□□□ -1.66
EFNA1-201ENST00000368406 SPRR2DP22532 72 aa4.68□□□□□ -1.66
EFNA1-201ENST00000368406 KRTAP23-1A1A580 65 aa4.65□□□□□ -1.66
EFNA1-201ENST00000368406 MT1EP04732 61 aa4.65□□□□□ -1.66
EFNA1-201ENST00000368406 PRO0628Q9UI54 55 aa4.65□□□□□ -1.66
EFNA1-201ENST00000368406 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
EFNA1-201ENST00000368406 KRTAP12-3P60328 96 aa4.63□□□□□ -1.67
EFNA1-201ENST00000368406 KRTAP2-2Q9BYT5 123 aa4.58□□□□□ -1.68
EFNA1-201ENST00000368406 KRTAP2-1Q9BYU5 128 aa4.58□□□□□ -1.68
EFNA1-201ENST00000368406 LCE5AQ5TCM9 118 aa4.57□□□□□ -1.68
EFNA1-201ENST00000368406 KRTAP19-3Q7Z4W3 81 aa4.57□□□□□ -1.68
EFNA1-201ENST00000368406 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
EFNA1-201ENST00000368406 KRTAP4-2Q9BYR5 136 aa4.54□□□□□ -1.68
EFNA1-201ENST00000368406 MT1LQ93083 61 aa4.51□□□□□ -1.69
EFNA1-201ENST00000368406 MT1GP13640 62 aa4.5□□□□□ -1.69
EFNA1-201ENST00000368406 KRTAP15-1Q3LI76 137 aa4.44□□□□□ -1.7
EFNA1-201ENST00000368406 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
EFNA1-201ENST00000368406 MT1MQ8N339 61 aa4.41□□□□□ -1.7
EFNA1-201ENST00000368406 DSTQ03001 7570 aaKnown RBP4.41□□□□□ -1.7
EFNA1-201ENST00000368406 KTN1-AS1Q86SY8 53 aa4.38□□□□□ -1.71
EFNA1-201ENST00000368406 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
EFNA1-201ENST00000368406 LCE4AQ5TA78 99 aa4.34□□□□□ -1.71
EFNA1-201ENST00000368406 KRTAP19-4Q3LI73 84 aa4.33□□□□□ -1.72
EFNA1-201ENST00000368406 KRTAP4-3Q9BYR4 195 aa4.29□□□□□ -1.72
EFNA1-201ENST00000368406 LCE3CQ5T5A8 94 aa4.28□□□□□ -1.72
EFNA1-201ENST00000368406 KRTAP5-3Q6L8H2 238 aa4.17□□□□□ -1.74
EFNA1-201ENST00000368406 KRTAP5-4Q6L8H1 288 aa4.12□□□□□ -1.75
EFNA1-201ENST00000368406 MT4P47944 62 aa4.06□□□□□ -1.76
EFNA1-201ENST00000368406 HMCN1Q96RW7 5635 aa4.05□□□□□ -1.76
EFNA1-201ENST00000368406 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
EFNA1-201ENST00000368406 KRTAP9-6A8MVA2 160 aa3.98□□□□□ -1.77
EFNA1-201ENST00000368406 GPR98Q8WXG9 6306 aa3.92□□□□□ -1.78
EFNA1-201ENST00000368406 SPRR5A0A1B0GTR4 108 aa3.9□□□□□ -1.78
EFNA1-201ENST00000368406 KRTAP12-4P60329 112 aa3.9□□□□□ -1.78
EFNA1-201ENST00000368406 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
EFNA1-201ENST00000368406 MT1AP04731 61 aa3.85□□□□□ -1.79
EFNA1-201ENST00000368406 AHNAK2Q8IVF2 5795 aa3.81□□□□□ -1.8
EFNA1-201ENST00000368406 KRTAP6-1Q3LI64 71 aa3.8□□□□□ -1.8
EFNA1-201ENST00000368406 SYNE1Q8NF91 8797 aaKnown RBP3.79□□□□□ -1.8
EFNA1-201ENST00000368406 KRTAP5-10Q6L8G5 202 aa3.75□□□□□ -1.81
EFNA1-201ENST00000368406 LUZP6Q538Z0 58 aa3.73□□□□□ -1.81
EFNA1-201ENST00000368406 KRTAP5-2Q701N4 177 aa3.64□□□□□ -1.83
EFNA1-201ENST00000368406 KRTAP5-7Q6L8G8 165 aa3.59□□□□□ -1.84
EFNA1-201ENST00000368406 H3BS24 57 aa3.58□□□□□ -1.84
EFNA1-201ENST00000368406 KRTAP6-2Q3LI66 62 aa3.58□□□□□ -1.84
EFNA1-201ENST00000368406 MT3P25713 68 aa3.52□□□□□ -1.85
EFNA1-201ENST00000368406 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
EFNA1-201ENST00000368406 A0A0A0MQY5 61 aa3.36□□□□□ -1.87
EFNA1-201ENST00000368406 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
EFNA1-201ENST00000368406 NDUFAF8A1L188 74 aa3.35□□□□□ -1.87
EFNA1-201ENST00000368406 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
EFNA1-201ENST00000368406 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
EFNA1-201ENST00000368406 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
EFNA1-201ENST00000368406 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
EFNA1-201ENST00000368406 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
EFNA1-201ENST00000368406 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
EFNA1-201ENST00000368406 AHNAKQ09666 5890 aaKnown RBP3.06□□□□□ -1.92
EFNA1-201ENST00000368406 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
EFNA1-201ENST00000368406 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
EFNA1-201ENST00000368406 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
EFNA1-201ENST00000368406 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
EFNA1-201ENST00000368406 INE1O15225 51 aa2.75□□□□□ -1.97
EFNA1-201ENST00000368406 LCE1FQ5T754 118 aa2.56□□□□□ -2
EFNA1-201ENST00000368406 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
EFNA1-201ENST00000368406 PRM1P04553 51 aa2.51□□□□□ -2.01
EFNA1-201ENST00000368406 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
EFNA1-201ENST00000368406 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
EFNA1-201ENST00000368406 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
EFNA1-201ENST00000368406 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
EFNA1-201ENST00000368406 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 62.8 ms