RNA–Protein interactions for RNA: ENST00000368396.8

MUC1-209, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-209ENST00000368396 LCE1AQ5T7P2 110 aa3.08□□□□□ -1.92
MUC1-209ENST00000368396 KRTAP5-3Q6L8H2 238 aa3.06□□□□□ -1.92
MUC1-209ENST00000368396 KRTAP19-6Q3LI70 58 aa3.05□□□□□ -1.92
MUC1-209ENST00000368396 KRTAP12-3P60328 96 aa3.02□□□□□ -1.93
MUC1-209ENST00000368396 SPRR5A0A1B0GTR4 108 aa2.97□□□□□ -1.93
MUC1-209ENST00000368396 KRTAP19-5Q3LI72 72 aa2.96□□□□□ -1.94
MUC1-209ENST00000368396 KMT2DO14686 5537 aa2.93□□□□□ -1.94
MUC1-209ENST00000368396 KRTAP19-7Q3SYF9 63 aa2.91□□□□□ -1.94
MUC1-209ENST00000368396 FSIP2Q5CZC0 6907 aa2.91□□□□□ -1.94
MUC1-209ENST00000368396 NDUFAF8A1L188 74 aa2.9□□□□□ -1.95
MUC1-209ENST00000368396 FCGBPQ9Y6R7 5405 aaPredicted RBP2.9□□□□□ -1.95
MUC1-209ENST00000368396 LUZP6Q538Z0 58 aa2.88□□□□□ -1.95
MUC1-209ENST00000368396 MT1EP04732 61 aa2.85□□□□□ -1.95
MUC1-209ENST00000368396 KRTAP2-2Q9BYT5 123 aa2.84□□□□□ -1.95
MUC1-209ENST00000368396 LCE3CQ5T5A8 94 aa2.83□□□□□ -1.96
MUC1-209ENST00000368396 MT1LQ93083 61 aa2.81□□□□□ -1.96
MUC1-209ENST00000368396 CRCT1Q9UGL9 99 aa2.77□□□□□ -1.97
MUC1-209ENST00000368396 MACF1Q9UPN3 7388 aaKnown RBP2.76□□□□□ -1.97
MUC1-209ENST00000368396 KRTAP19-3Q7Z4W3 81 aa2.71□□□□□ -1.98
MUC1-209ENST00000368396 MT1GP13640 62 aa2.7□□□□□ -1.98
MUC1-209ENST00000368396 MT3P25713 68 aa2.7□□□□□ -1.98
MUC1-209ENST00000368396 MUC12Q9UKN1 5478 aa2.69□□□□□ -1.98
MUC1-209ENST00000368396 KRTAP9-6A8MVA2 160 aa2.69□□□□□ -1.98
MUC1-209ENST00000368396 SPRR2FQ96RM1 72 aa2.69□□□□□ -1.98
MUC1-209ENST00000368396 MT1MQ8N339 61 aa2.67□□□□□ -1.98
MUC1-209ENST00000368396 KRTAP5-9P26371 169 aa2.65□□□□□ -1.99
MUC1-209ENST00000368396 SYNE2Q8WXH0 6885 aaKnown RBP2.64□□□□□ -1.99
MUC1-209ENST00000368396 KRTAP4-3Q9BYR4 195 aa2.61□□□□□ -1.99
MUC1-209ENST00000368396 LCE1FQ5T754 118 aa2.58□□□□□ -2
MUC1-209ENST00000368396 MDN1Q9NU22 5596 aa2.56□□□□□ -2
MUC1-209ENST00000368396 KRTAP6-3Q3LI67 103 aa2.55□□□□□ -2
MUC1-209ENST00000368396 KRTAP2-3P0C7H8 128 aa2.54□□□□□ -2
MUC1-209ENST00000368396 KRTAP2-4Q9BYR9 128 aa2.54□□□□□ -2
MUC1-209ENST00000368396 KRTAP2-1Q9BYU5 128 aa2.54□□□□□ -2
MUC1-209ENST00000368396 SPRR2EP22531 72 aa2.53□□□□□ -2
MUC1-209ENST00000368396 SPRR2BP35325 72 aa2.53□□□□□ -2
MUC1-209ENST00000368396 SPRR2AP35326 72 aa2.53□□□□□ -2
MUC1-209ENST00000368396 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
MUC1-209ENST00000368396 LCE1EQ5T753 118 aa2.47□□□□□ -2.01
MUC1-209ENST00000368396 DSTQ03001 7570 aaKnown RBP2.45□□□□□ -2.02
MUC1-209ENST00000368396 NEBP20929 6669 aa2.44□□□□□ -2.02
MUC1-209ENST00000368396 SPRR2DP22532 72 aa2.44□□□□□ -2.02
MUC1-209ENST00000368396 INE1O15225 51 aa2.41□□□□□ -2.02
MUC1-209ENST00000368396 KRTAP5-5Q701N2 237 aaPredicted RBP2.41□□□□□ -2.02
MUC1-209ENST00000368396 MT1AP04731 61 aa2.39□□□□□ -2.03
MUC1-209ENST00000368396 KRTAP6-1Q3LI64 71 aa2.36□□□□□ -2.03
MUC1-209ENST00000368396 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.03
MUC1-209ENST00000368396 SYNE1Q8NF91 8797 aaKnown RBP2.32□□□□□ -2.04
MUC1-209ENST00000368396 KRTAP5-4Q6L8H1 288 aa2.25□□□□□ -2.05
MUC1-209ENST00000368396 LCE3EQ5T5B0 92 aa2.22□□□□□ -2.05
MUC1-209ENST00000368396 KRTAP12-4P60329 112 aa2.19□□□□□ -2.06
MUC1-209ENST00000368396 KRTAP6-2Q3LI66 62 aa2.15□□□□□ -2.07
MUC1-209ENST00000368396 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
MUC1-209ENST00000368396 KRTAP20-1Q3LI63 56 aa2.12□□□□□ -2.07
MUC1-209ENST00000368396 MT4P47944 62 aa2.09□□□□□ -2.07
MUC1-209ENST00000368396 KRTAP20-2Q3LI61 65 aa2.09□□□□□ -2.07
MUC1-209ENST00000368396 HMCN1Q96RW7 5635 aa2.08□□□□□ -2.08
MUC1-209ENST00000368396 KRTAP5-1Q6L8H4 278 aa2.08□□□□□ -2.08
MUC1-209ENST00000368396 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
MUC1-209ENST00000368396 KRTAP4-4Q9BYR3 166 aa1.98□□□□□ -2.09
MUC1-209ENST00000368396 OBSCNQ5VST9 7968 aa1.98□□□□□ -2.09
MUC1-209ENST00000368396 PRM1P04553 51 aa1.88□□□□□ -2.11
MUC1-209ENST00000368396 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
MUC1-209ENST00000368396 MUC5ACP98088 5654 aa1.79□□□□□ -2.12
MUC1-209ENST00000368396 KRTAP5-10Q6L8G5 202 aa1.75□□□□□ -2.13
MUC1-209ENST00000368396 LCE1CQ5T751 118 aa1.72□□□□□ -2.13
MUC1-209ENST00000368396 LCE1BQ5T7P3 118 aa1.72□□□□□ -2.13
MUC1-209ENST00000368396 KRTAP5-8O75690 187 aa1.71□□□□□ -2.14
MUC1-209ENST00000368396 KRTAP5-7Q6L8G8 165 aa1.71□□□□□ -2.14
MUC1-209ENST00000368396 GPR98Q8WXG9 6306 aa1.62□□□□□ -2.15
MUC1-209ENST00000368396 MUC5BQ9HC84 5762 aaPredicted RBP1.55□□□□□ -2.16
MUC1-209ENST00000368396 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
MUC1-209ENST00000368396 AHNAKQ09666 5890 aaKnown RBP1.4□□□□□ -2.19
MUC1-209ENST00000368396 MUC19Q7Z5P9 8384 aa1.36□□□□□ -2.19
MUC1-209ENST00000368396 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
MUC1-209ENST00000368396 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
MUC1-209ENST00000368396 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 9.1 ms