RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 MT1XP80297 61 aa4.47□□□□□ -1.69
USF1-201ENST00000368019 SPRR2FQ96RM1 72 aa4.47□□□□□ -1.69
USF1-201ENST00000368019 SPRR2EP22531 72 aa4.46□□□□□ -1.7
USF1-201ENST00000368019 SPRR2BP35325 72 aa4.46□□□□□ -1.7
USF1-201ENST00000368019 SPRR2AP35326 72 aa4.46□□□□□ -1.7
USF1-201ENST00000368019 KRTAP12-3P60328 96 aa4.46□□□□□ -1.7
USF1-201ENST00000368019 KRTAP10-12P60413 245 aa4.45□□□□□ -1.7
USF1-201ENST00000368019 LCE1AQ5T7P2 110 aa4.41□□□□□ -1.7
USF1-201ENST00000368019 KRTAP2-2Q9BYT5 123 aa4.4□□□□□ -1.71
USF1-201ENST00000368019 KRTAP2-1Q9BYU5 128 aa4.4□□□□□ -1.71
USF1-201ENST00000368019 GPR98Q8WXG9 6306 aa4.32□□□□□ -1.72
USF1-201ENST00000368019 KRTAP4-8A0A0G2JLE6 195 aa4.31□□□□□ -1.72
USF1-201ENST00000368019 SPRR2DP22532 72 aa4.31□□□□□ -1.72
USF1-201ENST00000368019 KRTAP4-8Q9BYQ9 185 aa4.31□□□□□ -1.72
USF1-201ENST00000368019 KRTAP10-7P60409 375 aaPredicted RBP4.28□□□□□ -1.72
USF1-201ENST00000368019 KRTAP19-4Q3LI73 84 aa4.28□□□□□ -1.72
USF1-201ENST00000368019 LCE3BQ5TA77 95 aa4.22□□□□□ -1.73
USF1-201ENST00000368019 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
USF1-201ENST00000368019 KRTAP19-5Q3LI72 72 aa4.16□□□□□ -1.74
USF1-201ENST00000368019 DSTQ03001 7570 aaKnown RBP4.04□□□□□ -1.76
USF1-201ENST00000368019 LCE5AQ5TCM9 118 aa4□□□□□ -1.77
USF1-201ENST00000368019 KRTAP4-9Q9BYQ8 210 aa3.99□□□□□ -1.77
USF1-201ENST00000368019 KRTAP19-7Q3SYF9 63 aa3.98□□□□□ -1.77
USF1-201ENST00000368019 KRTAP9-6A8MVA2 160 aa3.97□□□□□ -1.77
USF1-201ENST00000368019 MT1EP04732 61 aa3.94□□□□□ -1.78
USF1-201ENST00000368019 KRTAP19-3Q7Z4W3 81 aa3.94□□□□□ -1.78
USF1-201ENST00000368019 MT1LQ93083 61 aa3.9□□□□□ -1.79
USF1-201ENST00000368019 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
USF1-201ENST00000368019 MT1GP13640 62 aa3.83□□□□□ -1.8
USF1-201ENST00000368019 LCE4AQ5TA78 99 aa3.82□□□□□ -1.8
USF1-201ENST00000368019 HMCN1Q96RW7 5635 aa3.8□□□□□ -1.8
USF1-201ENST00000368019 MT4P47944 62 aa3.78□□□□□ -1.8
USF1-201ENST00000368019 KRTAP4-7Q9BYR0 210 aa3.77□□□□□ -1.81
USF1-201ENST00000368019 MT1MQ8N339 61 aa3.76□□□□□ -1.81
USF1-201ENST00000368019 AHNAK2Q8IVF2 5795 aa3.76□□□□□ -1.81
USF1-201ENST00000368019 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
USF1-201ENST00000368019 KRTAP5-10Q6L8G5 202 aa3.73□□□□□ -1.81
USF1-201ENST00000368019 KRTAP4-6Q9BYQ5 205 aa3.69□□□□□ -1.82
USF1-201ENST00000368019 KRTAP4-3Q9BYR4 195 aa3.68□□□□□ -1.82
USF1-201ENST00000368019 KRTAP5-7Q6L8G8 165 aa3.62□□□□□ -1.83
USF1-201ENST00000368019 KRTAP5-3Q6L8H2 238 aa3.59□□□□□ -1.83
USF1-201ENST00000368019 KRTAP20-2Q3LI61 65 aa3.52□□□□□ -1.85
USF1-201ENST00000368019 LOC100996750A0A140TA64 210 aa3.51□□□□□ -1.85
USF1-201ENST00000368019 KRTAP5-5Q701N2 237 aaPredicted RBP3.5□□□□□ -1.85
USF1-201ENST00000368019 KRTAP12-4P60329 112 aa3.49□□□□□ -1.85
USF1-201ENST00000368019 MT1AP04731 61 aa3.47□□□□□ -1.85
USF1-201ENST00000368019 SYNE1Q8NF91 8797 aaKnown RBP3.39□□□□□ -1.87
USF1-201ENST00000368019 AHNAKQ09666 5890 aaKnown RBP3.31□□□□□ -1.88
USF1-201ENST00000368019 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
USF1-201ENST00000368019 KRTAP4-11Q9BYQ6 195 aa3.27□□□□□ -1.89
USF1-201ENST00000368019 LCE3DQ9BYE3 92 aa3.26□□□□□ -1.89
USF1-201ENST00000368019 KRTAP6-1Q3LI64 71 aa3.25□□□□□ -1.89
USF1-201ENST00000368019 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
USF1-201ENST00000368019 KRTAP5-8O75690 187 aa3.18□□□□□ -1.9
USF1-201ENST00000368019 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
USF1-201ENST00000368019 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
USF1-201ENST00000368019 PRM1P04553 51 aa3.1□□□□□ -1.91
USF1-201ENST00000368019 KRTAP9-4Q9BYQ2 154 aa3.1□□□□□ -1.91
USF1-201ENST00000368019 OBSCNQ5VST9 7968 aa3.06□□□□□ -1.92
USF1-201ENST00000368019 KRTAP6-2Q3LI66 62 aa3.06□□□□□ -1.92
USF1-201ENST00000368019 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
USF1-201ENST00000368019 MT3P25713 68 aa2.98□□□□□ -1.93
USF1-201ENST00000368019 KRTAP5-1Q6L8H4 278 aa2.95□□□□□ -1.94
USF1-201ENST00000368019 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
USF1-201ENST00000368019 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
USF1-201ENST00000368019 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
USF1-201ENST00000368019 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
USF1-201ENST00000368019 LCE1CQ5T751 118 aa2.54□□□□□ -2
USF1-201ENST00000368019 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
USF1-201ENST00000368019 LCE1FQ5T754 118 aa2.3□□□□□ -2.04
USF1-201ENST00000368019 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.3□□□□□ -2.04
USF1-201ENST00000368019 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
USF1-201ENST00000368019 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
USF1-201ENST00000368019 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
USF1-201ENST00000368019 KRTAP4-4Q9BYR3 166 aa1.93□□□□□ -2.1
USF1-201ENST00000368019 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
USF1-201ENST00000368019 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 40.7 ms