RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 C20orf197Q8N268 126 aa5.35□□□□□ -1.55
VAMP4-202ENST00000367740 MT1GP13640 62 aa5.34□□□□□ -1.55
VAMP4-202ENST00000367740 PP632Q6XCG6 107 aa5.29□□□□□ -1.56
VAMP4-202ENST00000367740 MT1MQ8N339 61 aa5.28□□□□□ -1.56
VAMP4-202ENST00000367740 LOC101927531A0A1B0GV80 90 aa5.25□□□□□ -1.57
VAMP4-202ENST00000367740 TRAV22A0A0B4J277 110 aa5.23□□□□□ -1.57
VAMP4-202ENST00000367740 KRTAP20-2Q3LI61 65 aa5.22□□□□□ -1.57
VAMP4-202ENST00000367740 KRTAP4-4Q9BYR3 166 aa5.21□□□□□ -1.58
VAMP4-202ENST00000367740 KRTAP4-3Q9BYR4 195 aa5.21□□□□□ -1.58
VAMP4-202ENST00000367740 UBL5Q9BZL1 73 aa5.21□□□□□ -1.58
VAMP4-202ENST00000367740 AHNAKQ09666 5890 aaKnown RBP5.16□□□□□ -1.58
VAMP4-202ENST00000367740 KRTAP19-5Q3LI72 72 aa5.15□□□□□ -1.59
VAMP4-202ENST00000367740 SNURFQ9Y675 71 aa5.14□□□□□ -1.59
VAMP4-202ENST00000367740 MP68P56378 58 aa5.13□□□□□ -1.59
VAMP4-202ENST00000367740 MT1LQ93083 61 aa5.12□□□□□ -1.59
VAMP4-202ENST00000367740 MUC5ACP98088 5654 aa5.1□□□□□ -1.59
VAMP4-202ENST00000367740 PRAC1Q96KF2 57 aa5.09□□□□□ -1.59
VAMP4-202ENST00000367740 CDC42SE1Q9NRR8 79 aa5.08□□□□□ -1.6
VAMP4-202ENST00000367740 CHKB-CPT1BH3BT56 60 aa5.04□□□□□ -1.6
VAMP4-202ENST00000367740 PSPHP1O15172 72 aa5.04□□□□□ -1.6
VAMP4-202ENST00000367740 SPTSSBQ8NFR3 76 aa5.02□□□□□ -1.61
VAMP4-202ENST00000367740 OCR1Q9BZK8 76 aa5.02□□□□□ -1.61
VAMP4-202ENST00000367740 MUC5BQ9HC84 5762 aaPredicted RBP5.02□□□□□ -1.61
VAMP4-202ENST00000367740 H0Y9P7 68 aa5.01□□□□□ -1.61
VAMP4-202ENST00000367740 A0A0D9SG42 100 aa4.98□□□□□ -1.61
VAMP4-202ENST00000367740 CAMK2N1Q7Z7J9 78 aa4.97□□□□□ -1.61
VAMP4-202ENST00000367740 SPANXA2-OT1Q8N9U9 137 aa4.97□□□□□ -1.61
VAMP4-202ENST00000367740 A6NED7 52 aa4.96□□□□□ -1.62
VAMP4-202ENST00000367740 KRTAP5-5Q701N2 237 aaPredicted RBP4.94□□□□□ -1.62
VAMP4-202ENST00000367740 KRTAP12-4P60329 112 aa4.92□□□□□ -1.62
VAMP4-202ENST00000367740 PRR15LQ9BU68 103 aa4.92□□□□□ -1.62
VAMP4-202ENST00000367740 H3BPC8 53 aa4.91□□□□□ -1.62
VAMP4-202ENST00000367740 LINC00208Q96KT6 92 aa4.89□□□□□ -1.63
VAMP4-202ENST00000367740 SYNE1Q8NF91 8797 aaKnown RBP4.89□□□□□ -1.63
VAMP4-202ENST00000367740 LINC01558Q9Y6Z2 57 aa4.88□□□□□ -1.63
VAMP4-202ENST00000367740 A8MU10 97 aa4.86□□□□□ -1.63
VAMP4-202ENST00000367740 KRTAP5-8O75690 187 aa4.85□□□□□ -1.63
VAMP4-202ENST00000367740 DMAC1Q96GE9 116 aa4.83□□□□□ -1.64
VAMP4-202ENST00000367740 KRTAP13-4Q3LI77 160 aa4.8□□□□□ -1.64
VAMP4-202ENST00000367740 MT3P25713 68 aa4.77□□□□□ -1.65
VAMP4-202ENST00000367740 C10orf95Q9H7T3 257 aa4.75□□□□□ -1.65
VAMP4-202ENST00000367740 ROMO1P60602 79 aa4.72□□□□□ -1.65
VAMP4-202ENST00000367740 COA5Q86WW8 74 aa4.72□□□□□ -1.65
VAMP4-202ENST00000367740 KRTAP5-2Q701N4 177 aa4.68□□□□□ -1.66
VAMP4-202ENST00000367740 LCE3AQ5TA76 89 aa4.67□□□□□ -1.66
VAMP4-202ENST00000367740 SPATA8Q6RVD6 105 aa4.67□□□□□ -1.66
VAMP4-202ENST00000367740 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
VAMP4-202ENST00000367740 MIR22HGQ0VDD5 57 aa4.61□□□□□ -1.67
VAMP4-202ENST00000367740 UQCR11O14957 56 aa4.59□□□□□ -1.67
VAMP4-202ENST00000367740 KRTAP25-1Q3LHN0 102 aa4.57□□□□□ -1.68
VAMP4-202ENST00000367740 KRTAP9-6A8MVA2 160 aa4.55□□□□□ -1.68
VAMP4-202ENST00000367740 K7ERS5 55 aa4.53□□□□□ -1.68
VAMP4-202ENST00000367740 ACYP2P14621 99 aa4.51□□□□□ -1.69
VAMP4-202ENST00000367740 SPINT4Q6UDR6 99 aa4.48□□□□□ -1.69
VAMP4-202ENST00000367740 A0A1B0GU69 56 aa4.47□□□□□ -1.69
VAMP4-202ENST00000367740 KRTAP12-3P60328 96 aa4.46□□□□□ -1.7
VAMP4-202ENST00000367740 NDUFAF8A1L188 74 aa4.44□□□□□ -1.7
VAMP4-202ENST00000367740 KRTAP12-1P59990 96 aa4.42□□□□□ -1.7
VAMP4-202ENST00000367740 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
VAMP4-202ENST00000367740 TNP1P09430 55 aa4.37□□□□□ -1.71
VAMP4-202ENST00000367740 KRTAP6-1Q3LI64 71 aa4.37□□□□□ -1.71
VAMP4-202ENST00000367740 MT1AP04731 61 aa4.32□□□□□ -1.72
VAMP4-202ENST00000367740 KRTAP6-2Q3LI66 62 aa4.32□□□□□ -1.72
VAMP4-202ENST00000367740 LCE1FQ5T754 118 aa4.32□□□□□ -1.72
VAMP4-202ENST00000367740 A0A1B0GU33 70 aa4.13□□□□□ -1.75
VAMP4-202ENST00000367740 LCE3CQ5T5A8 94 aa4.09□□□□□ -1.75
VAMP4-202ENST00000367740 INE1O15225 51 aa3.78□□□□□ -1.8
VAMP4-202ENST00000367740 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
VAMP4-202ENST00000367740 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
VAMP4-202ENST00000367740 LCE1CQ5T751 118 aa3.57□□□□□ -1.84
VAMP4-202ENST00000367740 PHGR1C9JFL3 82 aa3.46□□□□□ -1.86
VAMP4-202ENST00000367740 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
VAMP4-202ENST00000367740 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
VAMP4-202ENST00000367740 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
VAMP4-202ENST00000367740 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
VAMP4-202ENST00000367740 PRM1P04553 51 aa2.17□□□□□ -2.06
VAMP4-202ENST00000367740 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 7.9 ms